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BioLiP
Download all results in tab-seperated text for 30 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 1a26:A (2.25) BS01 CNA 2.4.2.-
    2.4.2.30    		 GO:0003950 ... P26446 9571033
    2 1szc:A (1.75) BS03 CNA 2.3.1.286 GO:0017136 ... P53686 15150415
    3 2od2:A (2.0) BS03 CNA 2.3.1.286 GO:0017136 ... P53686 17289592
    4 4bn5:A (3.25) BS01 CNA 2.3.1.286 GO:0017136 ... Q9NTG7 23897466
    5 4bn5:B (3.25) BS01 CNA 2.3.1.286 GO:0017136 ... Q9NTG7 23897466
    6 4bn5:C (3.25) BS01 CNA 2.3.1.286 GO:0017136 ... Q9NTG7 23897466
    7 4bn5:D (3.25) BS01 CNA 2.3.1.286 GO:0017136 ... Q9NTG7 23897466
    8 4bn5:E (3.25) BS01 CNA 2.3.1.286 GO:0017136 ... Q9NTG7 23897466
    9 4bn5:F (3.25) BS01 CNA 2.3.1.286 GO:0017136 ... Q9NTG7 23897466
    10 4bn5:G (3.25) BS01 CNA 2.3.1.286 GO:0017136 ... Q9NTG7 23897466
    11 4bn5:H (3.25) BS01 CNA 2.3.1.286 GO:0017136 ... Q9NTG7 23897466
    12 4bn5:I (3.25) BS01 CNA 2.3.1.286 GO:0017136 ... Q9NTG7 23897466
    13 4bn5:J (3.25) BS01 CNA 2.3.1.286 GO:0017136 ... Q9NTG7 23897466
    14 4bn5:K (3.25) BS01 CNA 2.3.1.286 GO:0017136 ... Q9NTG7 23897466
    15 4bn5:L (3.25) BS01 CNA 2.3.1.286 GO:0017136 ... Q9NTG7 23897466
    16 4fvt:A (2.47) BS02 CNA 2.3.1.286 GO:0017136 ... Q9NTG7 22849721
    17 4g1c:A (1.944) BS04 CNA 2.3.1.- GO:0036054 ... Q9NXA8 22849721
    18 4x3p:A (1.8) BS03 CNA 2.3.1.-
    2.3.1.286    		 GO:0017136 ... Q8IXJ6 28286128
    19 4zzj:A (2.7403) BS03 CNA 2.3.1.-
    2.3.1.286    		 GO:0070403 ... Q96EB6 26134520
    20 5g4c:A (2.1) BS03 CNA 2.3.1.-
    2.3.1.286    		 GO:0017136 ... Q8IXJ6 27610633
    21 5g4c:B (2.1) BS02 CNA 2.3.1.-
    2.3.1.286    		 GO:0017136 ... Q8IXJ6 27610633
    22 6gnk:C (2.55) BS01 CNA ? GO:0005576 ... Q93SQ1 30224724
    23 6hxs:A (2.05) BS01 CNA 2.4.2.- GO:0003950 ... Q8N5Y8 N/A
    24 6hxs:B (2.05) BS01 CNA 2.4.2.- GO:0003950 ... Q8N5Y8 N/A
    25 7omx:AAA (1.52) BS01 CNA 2.4.2.- GO:0003677 ... A0A0B0SG80 34408320
    26 7omy:AAA (1.6) BS02 CNA 2.4.2.- GO:0003677 ... A0A0B0SG80 34408320
    27 8bas:A (1.92) BS02 CNA ? GO:0000166 ... A0A794RBZ4 37390817
    28 8v15:A (2.4) BS03 CNA 2.3.1.286 GO:0017136 ... Q9NTG7 N/A
    29 8v15:C (2.4) BS04 CNA 2.3.1.286 GO:0017136 ... Q9NTG7 N/A
    30 8v2n:A (1.74) BS02 CNA 2.3.1.286 GO:0017136 ... Q9NTG7 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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