Home Research COVID-19 Services Publications People Teaching Job Opening News Forum Lab Only
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 44457 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    7601 2gsy:A (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    7602 2gsy:B (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    7603 2gsy:C (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    7604 2gsy:D (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    7605 2gsy:E (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    7606 2gsy:F (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    7607 2gsy:G (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    7608 2gsy:H (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    7609 2gsy:I (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    7610 2gsy:J (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    7611 2gsy:K (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    7612 2gsy:L (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    7613 2gsy:M (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    7614 2gsy:N (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    7615 2gsy:O (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    7616 2gsy:P (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    7617 2gsy:Q (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    7618 2gsy:R (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    7619 2gsy:S (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    7620 2gsy:T (2.6) BS01 CA 3.4.21.- GO:0005198 ... P61825 16809295
    7621 2gtl:G (3.5) BS03 CA ? GO:0005344 ... P11069 16843898
    7622 2gtl:M (3.5) BS01 CA ? GO:0046872 ... Q9GV76 16843898
    7623 2gtl:N (3.5) BS01 CA ? N/A Q2I743 16843898
    7624 2gtl:O (3.5) BS01 CA ? GO:0046872 ... Q2I742 16843898
    7625 2guy:A (1.59) BS01 CA 3.2.1.1 GO:0004556 ... P0C1B3 16880540
    7626 2gvu:A (2.0) BS01 CA 3.8.2.2 GO:0005509 ... Q7SIG4 17002369
    7627 2gvu:A (2.0) BS02 CA 3.8.2.2 GO:0005509 ... Q7SIG4 17002369
    7628 2gvv:A (1.73) BS01 CA 3.8.2.2 GO:0005509 ... Q7SIG4 17002369
    7629 2gvv:A (1.73) BS02 CA 3.8.2.2 GO:0005509 ... Q7SIG4 17002369
    7630 2gvw:A (1.86) BS01 CA 3.8.2.2 GO:0005509 ... Q7SIG4 17002369
    7631 2gvw:A (1.86) BS02 CA 3.8.2.2 GO:0005509 ... Q7SIG4 17002369
    7632 2gvx:A (2.0) BS01 CA 3.8.2.2 GO:0005509 ... Q7SIG4 17002369
    7633 2gvx:A (2.0) BS02 CA 3.8.2.2 GO:0005509 ... Q7SIG4 17002369
    7634 2gvy:A (1.8) BS09 CA 3.2.1.1 GO:0004556 ... P0C1B3 16880540
    7635 2gvy:B (1.8) BS05 CA 3.2.1.1 GO:0004556 ... P0C1B3 16880540
    7636 2gwr:A (2.1) BS01 CA ? GO:0000156 ... P9WGM7 17511470
    7637 2gxs:A (1.66) BS01 CA ? GO:0003676 ... O07897 16890241
    7638 2gxs:A (1.66) BS02 CA ? GO:0003676 ... O07897 16890241
    7639 2gxs:B (1.66) BS01 CA ? GO:0003676 ... O07897 16890241
    7640 2gxs:B (1.66) BS02 CA ? GO:0003676 ... O07897 16890241
    7641 2gy7:A (3.7) BS01 CA ? N/A O15123 16732286
    7642 2h0b:A (2.1) BS01 CA ? N/A Q28146 16772286
    7643 2h0b:B (2.1) BS01 CA ? N/A Q28146 16772286
    7644 2h0b:C (2.1) BS01 CA ? N/A Q28146 16772286
    7645 2h0b:D (2.1) BS01 CA ? N/A Q28146 16772286
    7646 2h0k:A (2.76) BS01 CA ? GO:0001786 ... P14668 21468022
    7647 2h0k:A (2.76) BS02 CA ? GO:0001786 ... P14668 21468022
    7648 2h0k:A (2.76) BS03 CA ? GO:0001786 ... P14668 21468022
    7649 2h0k:A (2.76) BS04 CA ? GO:0001786 ... P14668 21468022
    7650 2h0k:A (2.76) BS05 CA ? GO:0001786 ... P14668 21468022
    7651 2h0k:A (2.76) BS06 CA ? GO:0001786 ... P14668 21468022
    7652 2h0k:A (2.76) BS07 CA ? GO:0001786 ... P14668 21468022
    7653 2h0k:A (2.76) BS08 CA ? GO:0001786 ... P14668 21468022
    7654 2h0k:A (2.76) BS09 CA ? GO:0001786 ... P14668 21468022
    7655 2h0k:A (2.76) BS10 CA ? GO:0001786 ... P14668 21468022
    7656 2h0k:A (2.76) BS11 CA ? GO:0001786 ... P14668 21468022
    7657 2h0k:B (2.76) BS01 CA ? GO:0001786 ... P14668 21468022
    7658 2h0k:B (2.76) BS02 CA ? GO:0001786 ... P14668 21468022
    7659 2h0k:B (2.76) BS03 CA ? GO:0001786 ... P14668 21468022
    7660 2h0k:B (2.76) BS04 CA ? GO:0001786 ... P14668 21468022
    7661 2h0k:B (2.76) BS05 CA ? GO:0001786 ... P14668 21468022
    7662 2h0k:B (2.76) BS06 CA ? GO:0001786 ... P14668 21468022
    7663 2h0k:B (2.76) BS07 CA ? GO:0001786 ... P14668 21468022
    7664 2h0k:B (2.76) BS08 CA ? GO:0001786 ... P14668 21468022
    7665 2h0k:B (2.76) BS09 CA ? GO:0001786 ... P14668 21468022
    7666 2h0k:B (2.76) BS10 CA ? GO:0001786 ... P14668 21468022
    7667 2h0k:B (2.76) BS11 CA ? GO:0001786 ... P14668 21468022
    7668 2h0l:A (2.59) BS01 CA ? GO:0001786 ... P14668 N/A
    7669 2h0l:A (2.59) BS02 CA ? GO:0001786 ... P14668 N/A
    7670 2h0l:A (2.59) BS03 CA ? GO:0001786 ... P14668 N/A
    7671 2h1i:B (2.8) BS02 CA 3.1.1.1 GO:0016787 ... Q81AD5 N/A
    7672 2h1i:B (2.8) BS03 CA 3.1.1.1 GO:0016787 ... Q81AD5 N/A
    7673 2h1i:C (2.8) BS02 CA 3.1.1.1 GO:0016787 ... Q81AD5 N/A
    7674 2h1u:A (1.6) BS02 CA 3.4.21.36 GO:0004252 ... P00772 16754679
    7675 2h2k:A (2.0) BS01 CA ? GO:0001819 ... Q99584 17374362
    7676 2h2k:A (2.0) BS02 CA ? GO:0001819 ... Q99584 17374362
    7677 2h2k:B (2.0) BS01 CA ? GO:0001819 ... Q99584 17374362
    7678 2h2k:B (2.0) BS02 CA ? GO:0001819 ... Q99584 17374362
    7679 2h2n:A (2.3) BS01 CA 3.6.1.6 GO:0005509 ... Q8WVQ1 16835225
    7680 2h2n:B (2.3) BS01 CA 3.6.1.6 GO:0005509 ... Q8WVQ1 16835225
    7681 2h2t:B (1.3) BS01 CA ? N/A P06734 16765898
    7682 2h2u:A (2.4) BS01 CA 3.6.1.6 GO:0005509 ... Q8WVQ1 16835225
    7683 2h2u:B (2.4) BS01 CA 3.6.1.6 GO:0005509 ... Q8WVQ1 16835225
    7684 2h43:B (2.7) BS02 CA ? GO:0005102 ... P02675 17115691
    7685 2h43:C (2.7) BS01 CA ? GO:0005102 ... P02679 17115691
    7686 2h43:E (2.7) BS02 CA ? GO:0005102 ... P02675 17115691
    7687 2h43:F (2.7) BS01 CA ? GO:0005102 ... P02679 17115691
    7688 2h61:A (1.9) BS01 CA ? GO:0001726 ... P04271 17660747
    7689 2h61:A (1.9) BS02 CA ? GO:0001726 ... P04271 17660747
    7690 2h61:B (1.9) BS01 CA ? GO:0001726 ... P04271 17660747
    7691 2h61:B (1.9) BS02 CA ? GO:0001726 ... P04271 17660747
    7692 2h61:C (1.9) BS01 CA ? GO:0001726 ... P04271 17660747
    7693 2h61:C (1.9) BS02 CA ? GO:0001726 ... P04271 17660747
    7694 2h61:D (1.9) BS01 CA ? GO:0001726 ... P04271 17660747
    7695 2h61:D (1.9) BS02 CA ? GO:0001726 ... P04271 17660747
    7696 2h61:E (1.9) BS01 CA ? GO:0001726 ... P04271 17660747
    7697 2h61:E (1.9) BS02 CA ? GO:0001726 ... P04271 17660747
    7698 2h61:E (1.9) BS03 CA ? GO:0001726 ... P04271 17660747
    7699 2h61:F (1.9) BS01 CA ? GO:0001726 ... P04271 17660747
    7700 2h61:F (1.9) BS02 CA ? GO:0001726 ... P04271 17660747
    7701 2h61:G (1.9) BS01 CA ? GO:0001726 ... P04271 17660747
    7702 2h61:G (1.9) BS02 CA ? GO:0001726 ... P04271 17660747
    7703 2h61:H (1.9) BS01 CA ? GO:0001726 ... P04271 17660747
    7704 2h61:H (1.9) BS02 CA ? GO:0001726 ... P04271 17660747
    7705 2h9d:D (1.95) BS02 CA 4.2.99.21
    5.4.99.5
    GO:0004106 ... Q51507 16914555
    7706 2hck:A (3.0) BS02 CA 2.7.10.2 GO:0004672 ... P08631 9024658
    7707 2hck:B (3.0) BS01 CA 2.7.10.2 GO:0004672 ... P08631 9024658
    7708 2hcn:A (2.35) BS01 CA 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13
    GO:0003968 ... P14335 17287213
    7709 2hd4:A (2.15) BS02 CA 3.4.21.64 GO:0004252 ... P06873 N/A
    7710 2het:A (3.0) BS01 CA ? GO:0001750 ... P21457 17015448
    7711 2het:B (3.0) BS01 CA ? GO:0001750 ... P21457 17015448
    7712 2het:C (3.0) BS01 CA ? GO:0001750 ... P21457 17015448
    7713 2het:D (3.0) BS01 CA ? GO:0001750 ... P21457 17015448
    7714 2hf3:A (1.8) BS01 CA 3.6.4.- GO:0000281 ... P10987 16920713
    7715 2hf4:A (1.8) BS01 CA 3.6.4.- GO:0000281 ... P10987 16920713
    7716 2hf5:A (-1.00) BS01 CA ? GO:0005509 ... P0DP23 17473011
    7717 2hf5:A (-1.00) BS02 CA ? GO:0005509 ... P0DP23 17473011
    7718 2hi8:X (1.64) BS04 CA 1.8.3.7 N/A Q8NBK3 17452787
    7719 2hi8:X (1.64) BS05 CA 1.8.3.7 N/A Q8NBK3 17452787
    7720 2hib:X (2.0) BS01 CA 1.8.3.7 N/A Q8NBK3 17452787
    7721 2hib:X (2.0) BS02 CA 1.8.3.7 N/A Q8NBK3 17452787
    7722 2hih:A (2.86) BS02 CA 3.1.1.3
    3.1.1.32
    N/A P04635 17582438
    7723 2hih:B (2.86) BS02 CA 3.1.1.3
    3.1.1.32
    N/A P04635 17582438
    7724 2hlo:B (2.6) BS01 CA ? GO:0005102 ... P02675 N/A
    7725 2hlo:B (2.6) BS02 CA ? GO:0005102 ... P02675 N/A
    7726 2hlo:C (2.6) BS02 CA ? GO:0005102 ... P02679 N/A
    7727 2hlo:C (2.6) BS03 CA ? GO:0005102 ... P02679 N/A
    7728 2hlo:E (2.6) BS01 CA ? GO:0005102 ... P02675 N/A
    7729 2hlo:E (2.6) BS02 CA ? GO:0005102 ... P02675 N/A
    7730 2hlo:F (2.6) BS02 CA ? GO:0005102 ... P02679 N/A
    7731 2hn2:A (3.7) BS01 CA ? GO:0000287 ... Q9WZ31 16902408
    7732 2hn2:B (3.7) BS01 CA ? GO:0000287 ... Q9WZ31 16902408
    7733 2hn2:C (3.7) BS01 CA ? GO:0000287 ... Q9WZ31 16902408
    7734 2hn2:C (3.7) BS02 CA ? GO:0000287 ... Q9WZ31 16902408
    7735 2hn2:E (3.7) BS01 CA ? GO:0000287 ... Q9WZ31 16902408
    7736 2hn2:E (3.7) BS02 CA ? GO:0000287 ... Q9WZ31 16902408
    7737 2hnf:A (1.8) BS01 CA ? N/A Q7B004 16934834
    7738 2ho0:A (2.5) BS01 CA ? N/A Q7B004 16934834
    7739 2ho0:A (2.5) BS02 CA ? N/A Q7B004 16934834
    7740 2hod:B (2.9) BS02 CA ? GO:0005102 ... P02675 N/A
    7741 2hod:C (2.9) BS02 CA ? GO:0005102 ... P02679 N/A
    7742 2hod:E (2.9) BS02 CA ? GO:0005102 ... P02675 N/A
    7743 2hod:F (2.9) BS02 CA ? GO:0005102 ... P02679 N/A
    7744 2hod:H (2.9) BS02 CA ? GO:0005102 ... P02675 N/A
    7745 2hod:I (2.9) BS02 CA ? GO:0005102 ... P02679 N/A
    7746 2hod:K (2.9) BS02 CA ? GO:0005102 ... P02675 N/A
    7747 2hod:K (2.9) BS03 CA ? GO:0005102 ... P02675 N/A
    7748 2hod:L (2.9) BS02 CA ? GO:0005102 ... P02679 N/A
    7749 2hoh:C (1.9) BS01 CA 4.6.1.24 GO:0001411 ... P00651 10211818
    7750 2hoh:D (1.9) BS01 CA 4.6.1.24 GO:0001411 ... P00651 10211818
    7751 2hpc:B (2.9) BS02 CA ? GO:0005102 ... P02675 N/A
    7752 2hpc:C (2.9) BS02 CA ? GO:0005102 ... P02679 N/A
    7753 2hpc:E (2.9) BS02 CA ? GO:0005102 ... P02675 N/A
    7754 2hpc:E (2.9) BS03 CA ? GO:0005102 ... P02675 N/A
    7755 2hpc:F (2.9) BS02 CA ? GO:0005102 ... P02679 N/A
    7756 2hpc:H (2.9) BS02 CA ? GO:0005102 ... P02675 N/A
    7757 2hpc:I (2.9) BS02 CA ? GO:0005102 ... P02679 N/A
    7758 2hpc:K (2.9) BS02 CA ? GO:0005102 ... P02675 N/A
    7759 2hpc:K (2.9) BS03 CA ? GO:0005102 ... P02675 N/A
    7760 2hpc:L (2.9) BS02 CA ? GO:0005102 ... P02679 N/A
    7761 2hph:A (1.33) BS02 CA ? GO:0005509 ... P0AEE5 N/A
    7762 2hpz:A (1.69) BS02 CA 3.4.21.64 GO:0004252 ... P06873 N/A
    7763 2hq8:A (1.8) BS01 CA ? GO:0005509 ... C9V488 18385886
    7764 2hq8:A (1.8) BS02 CA ? GO:0005509 ... C9V488 18385886
    7765 2hq8:A (1.8) BS03 CA ? GO:0005509 ... C9V488 18385886
    7766 2hq8:B (1.8) BS01 CA ? GO:0005509 ... C9V488 18385886
    7767 2hq8:B (1.8) BS02 CA ? GO:0005509 ... C9V488 18385886
    7768 2hq8:B (1.8) BS03 CA ? GO:0005509 ... C9V488 18385886
    7769 2hqw:A (1.9) BS02 CA ? GO:0000086 ... P0DP29 18073110
    7770 2hqw:A (1.9) BS03 CA ? GO:0000086 ... P0DP29 18073110
    7771 2hqw:A (1.9) BS04 CA ? GO:0000086 ... P0DP29 18073110
    7772 2hqw:A (1.9) BS05 CA ? GO:0000086 ... P0DP29 18073110
    7773 2hrg:A (1.58) BS01 CA 1.10.3.2 GO:0005507 ... Q9HDQ0 N/A
    7774 2hrg:A (1.58) BS02 CA 1.10.3.2 GO:0005507 ... Q9HDQ0 N/A
    7775 2ht5:A (2.4) BS01 CA 3.2.1.18 GO:0004308 ... Q07599 16915235
    7776 2htv:A (2.8) BS01 CA 3.2.1.18 GO:0004308 ... Q6XV46 16915235
    7777 2htv:B (2.8) BS01 CA 3.2.1.18 GO:0004308 ... Q6XV46 16915235
    7778 2hty:A (2.5) BS01 CA 3.2.1.18 GO:0004308 ... Q6DPL2 16915235
    7779 2hty:B (2.5) BS01 CA 3.2.1.18 GO:0004308 ... Q6DPL2 16915235
    7780 2hty:C (2.5) BS01 CA 3.2.1.18 GO:0004308 ... Q6DPL2 16915235
    7781 2hty:D (2.5) BS01 CA 3.2.1.18 GO:0004308 ... Q6DPL2 16915235
    7782 2hty:E (2.5) BS01 CA 3.2.1.18 GO:0004308 ... Q6DPL2 16915235
    7783 2hty:F (2.5) BS01 CA 3.2.1.18 GO:0004308 ... Q6DPL2 16915235
    7784 2hty:G (2.5) BS01 CA 3.2.1.18 GO:0004308 ... Q6DPL2 16915235
    7785 2hty:H (2.5) BS01 CA 3.2.1.18 GO:0004308 ... Q6DPL2 16915235
    7786 2hu6:A (1.32) BS03 CA 3.4.24.65 GO:0004222 ... P39900 16899369
    7787 2hu6:A (1.32) BS04 CA 3.4.24.65 GO:0004222 ... P39900 16899369
    7788 2hu6:A (1.32) BS05 CA 3.4.24.65 GO:0004222 ... P39900 16899369
    7789 2hyk:A (1.3) BS01 CA 3.2.1.39 GO:0004553 ... Q2V0H0 17879342
    7790 2hyu:A (1.86) BS04 CA ? GO:0001525 ... P07355 16882661
    7791 2hyu:A (1.86) BS05 CA ? GO:0001525 ... P07355 16882661
    7792 2hyu:A (1.86) BS06 CA ? GO:0001525 ... P07355 16882661
    7793 2hyu:A (1.86) BS07 CA ? GO:0001525 ... P07355 16882661
    7794 2hyu:A (1.86) BS08 CA ? GO:0001525 ... P07355 16882661
    7795 2hyv:A (1.42) BS03 CA ? GO:0001525 ... P07355 16882661
    7796 2hyv:A (1.42) BS04 CA ? GO:0001525 ... P07355 16882661
    7797 2hyv:A (1.42) BS05 CA ? GO:0001525 ... P07355 16882661
    7798 2hyv:A (1.42) BS06 CA ? GO:0001525 ... P07355 16882661
    7799 2hyv:A (1.42) BS07 CA ? GO:0001525 ... P07355 16882661
    7800 2hyw:A (2.1) BS01 CA ? GO:0001525 ... P07355 16882661

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218