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BioLiP
Download all results in tab-seperated text for 44457 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    42601 8k5x:B (1.9) BS03 CA 3.4.24.35 GO:0004222 ... P14780 37952596
    42602 8k5x:B (1.9) BS04 CA 3.4.24.35 GO:0004222 ... P14780 37952596
    42603 8k5x:B (1.9) BS05 CA 3.4.24.35 GO:0004222 ... P14780 37952596
    42604 8k5y:A (1.52) BS03 CA 3.4.24.35 GO:0004222 ... P14780 37952596
    42605 8k5y:A (1.52) BS04 CA 3.4.24.35 GO:0004222 ... P14780 37952596
    42606 8k5y:A (1.52) BS05 CA 3.4.24.35 GO:0004222 ... P14780 37952596
    42607 8k5y:B (1.52) BS03 CA 3.4.24.35 GO:0004222 ... P14780 37952596
    42608 8k5y:B (1.52) BS04 CA 3.4.24.35 GO:0004222 ... P14780 37952596
    42609 8k5y:B (1.52) BS05 CA 3.4.24.35 GO:0004222 ... P14780 37952596
    42610 8k7p:A (2.19) BS03 CA 3.1.1.3 N/A A0A0U1MWF9 38757397
    42611 8k7p:B (2.19) BS04 CA 3.1.1.3 N/A A0A0U1MWF9 38757397
    42612 8k7q:A (2.02) BS03 CA 3.1.1.3 N/A A0A0U1MWF9 38757397
    42613 8k7q:B (2.02) BS04 CA 3.1.1.3 N/A A0A0U1MWF9 38757397
    42614 8k9z:B (2.9) BS01 CA N/A GO:0000086 ... P0DP24 39043696
    42615 8k9z:B (2.9) BS02 CA N/A GO:0000086 ... P0DP24 39043696
    42616 8k9z:B (2.9) BS03 CA N/A GO:0000086 ... P0DP24 39043696
    42617 8k9z:B (2.9) BS04 CA N/A GO:0000086 ... P0DP24 39043696
    42618 8k9z:D (2.9) BS01 CA N/A GO:0000086 ... P0DP24 39043696
    42619 8k9z:D (2.9) BS02 CA N/A GO:0000086 ... P0DP24 39043696
    42620 8k9z:D (2.9) BS03 CA N/A GO:0000086 ... P0DP24 39043696
    42621 8k9z:D (2.9) BS04 CA N/A GO:0000086 ... P0DP24 39043696
    42622 8ka0:B (2.35) BS01 CA N/A GO:0000086 ... P0DP24 39043696
    42623 8ka0:B (2.35) BS02 CA N/A GO:0000086 ... P0DP24 39043696
    42624 8ka0:D (2.35) BS01 CA N/A GO:0000086 ... P0DP24 39043696
    42625 8ka0:D (2.35) BS02 CA N/A GO:0000086 ... P0DP24 39043696
    42626 8ka0:F (2.35) BS01 CA N/A GO:0000086 ... P0DP24 39043696
    42627 8ka0:F (2.35) BS02 CA N/A GO:0000086 ... P0DP24 39043696
    42628 8ka0:H (2.35) BS01 CA N/A GO:0000086 ... P0DP24 39043696
    42629 8ka0:H (2.35) BS02 CA N/A GO:0000086 ... P0DP24 39043696
    42630 8kdu:A (2.3) BS03 CA N/A N/A P00760 N/A
    42631 8kfr:A (2.1) BS04 CA N/A N/A B4FCI7 38886375
    42632 8kfr:B (2.1) BS03 CA N/A N/A B4FCI7 38886375
    42633 8khv:A (1.9) BS02 CA N/A N/A A0A286FIB6 N/A
    42634 8khv:A (1.9) BS03 CA N/A N/A A0A286FIB6 N/A
    42635 8oer:A (3.0) BS01 CA ? N/A Q9HC84 N/A
    42636 8oer:A (3.0) BS02 CA ? N/A Q9HC84 N/A
    42637 8oer:B (3.0) BS01 CA ? N/A Q9HC84 N/A
    42638 8oer:B (3.0) BS02 CA ? N/A Q9HC84 N/A
    42639 8oer:C (3.0) BS01 CA ? N/A Q9HC84 N/A
    42640 8oer:D (3.0) BS01 CA ? N/A Q9HC84 N/A
    42641 8oer:I (3.0) BS01 CA ? N/A Q9HC84 N/A
    42642 8oer:J (3.0) BS01 CA ? N/A Q9HC84 N/A
    42643 8oes:A (3.0) BS01 CA ? N/A Q9HC84 N/A
    42644 8oes:A (3.0) BS02 CA ? N/A Q9HC84 N/A
    42645 8oes:A (3.0) BS03 CA ? N/A Q9HC84 N/A
    42646 8oes:B (3.0) BS01 CA ? N/A Q9HC84 N/A
    42647 8oes:B (3.0) BS02 CA ? N/A Q9HC84 N/A
    42648 8oes:B (3.0) BS03 CA ? N/A Q9HC84 N/A
    42649 8oes:C (3.0) BS01 CA ? N/A Q9HC84 N/A
    42650 8oes:C (3.0) BS02 CA ? N/A Q9HC84 N/A
    42651 8oes:C (3.0) BS03 CA ? N/A Q9HC84 N/A
    42652 8oes:D (3.0) BS01 CA ? N/A Q9HC84 N/A
    42653 8oes:D (3.0) BS02 CA ? N/A Q9HC84 N/A
    42654 8oes:D (3.0) BS03 CA ? N/A Q9HC84 N/A
    42655 8oes:E (3.0) BS01 CA ? N/A Q9HC84 N/A
    42656 8oes:E (3.0) BS02 CA ? N/A Q9HC84 N/A
    42657 8oes:F (3.0) BS01 CA ? N/A Q9HC84 N/A
    42658 8oes:F (3.0) BS02 CA ? N/A Q9HC84 N/A
    42659 8oes:G (3.0) BS01 CA ? N/A Q9HC84 N/A
    42660 8oes:H (3.0) BS01 CA ? N/A Q9HC84 N/A
    42661 8oes:I (3.0) BS01 CA ? N/A Q9HC84 N/A
    42662 8oes:J (3.0) BS01 CA ? N/A Q9HC84 N/A
    42663 8oes:K (3.0) BS01 CA ? N/A Q9HC84 N/A
    42664 8oes:L (3.0) BS01 CA ? N/A Q9HC84 N/A
    42665 8oes:M (3.0) BS01 CA ? N/A Q9HC84 N/A
    42666 8oes:N (3.0) BS01 CA ? N/A Q9HC84 N/A
    42667 8ogi:B (1.547) BS02 CA 1.11.1.7 GO:0004601 ... P11678 38229400
    42668 8oi7:A (1.85) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    42669 8oi7:B (1.85) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    42670 8oi9:A (1.95) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    42671 8oi9:B (1.95) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    42672 8oia:A (2.3) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    42673 8oia:B (2.3) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    42674 8oia:C (2.3) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    42675 8oia:D (2.3) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    42676 8oib:A (2.44) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    42677 8oib:B (2.44) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    42678 8oib:C (2.44) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    42679 8oib:D (2.44) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    42680 8oic:A (2.8) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    42681 8oic:B (2.8) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    42682 8oic:C (2.8) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    42683 8oic:D (2.8) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    42684 8oic:E (2.8) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    42685 8oic:F (2.8) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    42686 8oic:G (2.8) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    42687 8oic:H (2.8) BS01 CA ? GO:0005829 ... A2FTT0 37482279
    42688 8oja:A (1.87) BS03 CA 2.7.7.7
    3.1.26.4    		 GO:0000166 ... P04293 38806233
    42689 8oja:A (1.87) BS04 CA 2.7.7.7
    3.1.26.4    		 GO:0000166 ... P04293 38806233
    42690 8ojb:A (1.9) BS02 CA 2.7.7.7
    3.1.26.4    		 GO:0000166 ... P04293 38806233
    42691 8ojb:A (1.9) BS03 CA 2.7.7.7
    3.1.26.4    		 GO:0000166 ... P04293 38806233
    42692 8ojc:A (2.08) BS02 CA 2.7.7.7
    3.1.26.4    		 GO:0000166 ... P04293 38806233
    42693 8ojc:A (2.08) BS03 CA 2.7.7.7
    3.1.26.4    		 GO:0000166 ... P04293 38806233
    42694 8ojd:A (2.46) BS03 CA 2.7.7.7
    3.1.26.4    		 GO:0000166 ... P04293 38806233
    42695 8ol9:H (2.6) BS01 CA 3.4.21.22 GO:0004252 ... P00740 37421602
    42696 8olb:c (3.4) BS01 CA N/A N/A A0A060IEQ1 N/A
    42697 8olb:c (3.4) BS02 CA N/A N/A A0A060IEQ1 N/A
    42698 8olb:d (3.4) BS01 CA N/A N/A A0A060IEQ1 N/A
    42699 8olb:d (3.4) BS02 CA N/A N/A A0A060IEQ1 N/A
    42700 8olb:e (3.4) BS01 CA N/A N/A A0A060IEQ1 N/A
    42701 8olb:e (3.4) BS02 CA N/A N/A A0A060IEQ1 N/A
    42702 8olb:f (3.4) BS01 CA N/A N/A A0A060IEQ1 N/A
    42703 8olb:f (3.4) BS02 CA N/A N/A A0A060IEQ1 N/A
    42704 8olb:g (3.4) BS01 CA N/A N/A A0A060IEQ1 N/A
    42705 8olb:g (3.4) BS02 CA N/A N/A A0A060IEQ1 N/A
    42706 8olb:h (3.4) BS01 CA N/A N/A A0A060IEQ1 N/A
    42707 8olb:h (3.4) BS02 CA N/A N/A A0A060IEQ1 N/A
    42708 8olb:i (3.4) BS01 CA N/A N/A A0A060IEQ1 N/A
    42709 8olb:i (3.4) BS02 CA N/A N/A A0A060IEQ1 N/A
    42710 8olb:j (3.4) BS01 CA N/A N/A A0A060IEQ1 N/A
    42711 8olb:j (3.4) BS02 CA N/A N/A A0A060IEQ1 N/A
    42712 8olb:k (3.4) BS01 CA N/A N/A A0A060IEQ1 N/A
    42713 8olb:k (3.4) BS02 CA N/A N/A A0A060IEQ1 N/A
    42714 8olb:l (3.4) BS01 CA N/A N/A A0A060IEQ1 N/A
    42715 8olb:l (3.4) BS02 CA N/A N/A A0A060IEQ1 N/A
    42716 8olb:m (3.4) BS01 CA N/A N/A A0A060IEQ1 N/A
    42717 8olb:m (3.4) BS02 CA N/A N/A A0A060IEQ1 N/A
    42718 8olb:n (3.4) BS01 CA N/A N/A A0A060IEQ1 N/A
    42719 8olb:n (3.4) BS02 CA N/A N/A A0A060IEQ1 N/A
    42720 8olb:o (3.4) BS01 CA N/A N/A A0A060IEQ1 N/A
    42721 8olc:c (3.48) BS01 CA N/A N/A A0A060IEQ1 N/A
    42722 8olc:c (3.48) BS02 CA N/A N/A A0A060IEQ1 N/A
    42723 8olc:d (3.48) BS01 CA N/A N/A A0A060IEQ1 N/A
    42724 8olc:d (3.48) BS02 CA N/A N/A A0A060IEQ1 N/A
    42725 8olc:e (3.48) BS01 CA N/A N/A A0A060IEQ1 N/A
    42726 8olc:e (3.48) BS02 CA N/A N/A A0A060IEQ1 N/A
    42727 8olc:f (3.48) BS01 CA N/A N/A A0A060IEQ1 N/A
    42728 8olc:f (3.48) BS02 CA N/A N/A A0A060IEQ1 N/A
    42729 8olc:g (3.48) BS01 CA N/A N/A A0A060IEQ1 N/A
    42730 8olc:g (3.48) BS02 CA N/A N/A A0A060IEQ1 N/A
    42731 8olc:h (3.48) BS01 CA N/A N/A A0A060IEQ1 N/A
    42732 8olc:h (3.48) BS02 CA N/A N/A A0A060IEQ1 N/A
    42733 8olc:i (3.48) BS01 CA N/A N/A A0A060IEQ1 N/A
    42734 8olc:i (3.48) BS02 CA N/A N/A A0A060IEQ1 N/A
    42735 8olc:j (3.48) BS01 CA N/A N/A A0A060IEQ1 N/A
    42736 8olc:j (3.48) BS02 CA N/A N/A A0A060IEQ1 N/A
    42737 8olc:k (3.48) BS01 CA N/A N/A A0A060IEQ1 N/A
    42738 8olc:k (3.48) BS02 CA N/A N/A A0A060IEQ1 N/A
    42739 8olc:l (3.48) BS01 CA N/A N/A A0A060IEQ1 N/A
    42740 8olc:l (3.48) BS02 CA N/A N/A A0A060IEQ1 N/A
    42741 8olc:m (3.48) BS01 CA N/A N/A A0A060IEQ1 N/A
    42742 8olc:m (3.48) BS02 CA N/A N/A A0A060IEQ1 N/A
    42743 8olc:n (3.48) BS01 CA N/A N/A A0A060IEQ1 N/A
    42744 8olc:n (3.48) BS02 CA N/A N/A A0A060IEQ1 N/A
    42745 8opr:A (1.811) BS01 CA ? N/A P94217 37923757
    42746 8opr:A (1.811) BS02 CA ? N/A P94217 37923757
    42747 8opr:A (1.811) BS03 CA ? N/A P94217 37923757
    42748 8osi:A (2.42) BS02 CA ? GO:0003746 ... A0A100IBH9
    A0A1S4NYF2
    A0A254U4M1    		 37163937
    42749 8osi:A (2.42) BS03 CA ? GO:0003746 ... A0A100IBH9
    A0A1S4NYF2
    A0A254U4M1    		 37163937
    42750 8osi:A (2.42) BS04 CA ? GO:0003746 ... A0A100IBH9
    A0A1S4NYF2
    A0A254U4M1    		 37163937
    42751 8osi:A (2.42) BS05 CA ? GO:0003746 ... A0A100IBH9
    A0A1S4NYF2
    A0A254U4M1    		 37163937
    42752 8ov0:A (1.7) BS01 CA ? N/A P98088 37526947
    42753 8ovc:L (2.8) BS04 CA N/A GO:0004129 ... A0A2U9PNL2 38902248
    42754 8ovc:R (2.8) BS04 CA N/A GO:0004129 ... A0A2U9PNL2 38902248
    42755 8ovd:L (2.3) BS05 CA N/A GO:0004129 ... A0A2U9PNL2 38902248
    42756 8ovd:R (2.3) BS05 CA N/A GO:0004129 ... A0A2U9PNL2 38902248
    42757 8owm:A (1.7) BS03 CA 1.4.1.3 GO:0000325 ... Q38946 37478728
    42758 8owm:B (1.7) BS03 CA 1.4.1.3 GO:0000325 ... Q38946 37478728
    42759 8owm:C (1.7) BS03 CA 1.4.1.3 GO:0000325 ... Q38946 37478728
    42760 8owm:D (1.7) BS03 CA 1.4.1.3 GO:0000325 ... Q38946 37478728
    42761 8owm:E (1.7) BS03 CA 1.4.1.3 GO:0000325 ... Q38946 37478728
    42762 8owm:F (1.7) BS03 CA 1.4.1.3 GO:0000325 ... Q38946 37478728
    42763 8own:A (3.26) BS01 CA 1.4.1.3 GO:0000325 ... Q38946 37478728
    42764 8own:B (3.26) BS01 CA 1.4.1.3 GO:0000325 ... Q38946 37478728
    42765 8own:C (3.26) BS01 CA 1.4.1.3 GO:0000325 ... Q38946 37478728
    42766 8own:D (3.26) BS01 CA 1.4.1.3 GO:0000325 ... Q38946 37478728
    42767 8own:E (3.26) BS01 CA 1.4.1.3 GO:0000325 ... Q38946 37478728
    42768 8own:F (3.26) BS01 CA 1.4.1.3 GO:0000325 ... Q38946 37478728
    42769 8oxv:A (1.8) BS01 CA 2.3.2.13 GO:0003810 ... Q08188 37798283
    42770 8oxv:A (1.8) BS02 CA 2.3.2.13 GO:0003810 ... Q08188 37798283
    42771 8oxv:A (1.8) BS03 CA 2.3.2.13 GO:0003810 ... Q08188 37798283
    42772 8oxw:A (1.7) BS01 CA 2.3.2.13 GO:0003810 ... Q08188 37798283
    42773 8oxw:A (1.7) BS02 CA 2.3.2.13 GO:0003810 ... Q08188 37798283
    42774 8oxw:A (1.7) BS03 CA 2.3.2.13 GO:0003810 ... Q08188 37798283
    42775 8oxx:A (2.5) BS01 CA 2.3.2.13 GO:0018149 ... Q08188 37798283
    42776 8oxx:A (2.5) BS02 CA 2.3.2.13 GO:0018149 ... Q08188 37798283
    42777 8oxx:A (2.5) BS03 CA 2.3.2.13 GO:0018149 ... Q08188 37798283
    42778 8oyh:A (1.8) BS02 CA 3.4.21.75 GO:0004252 ... P09958 38385828
    42779 8oyh:A (1.8) BS03 CA 3.4.21.75 GO:0004252 ... P09958 38385828
    42780 8oyh:A (1.8) BS04 CA 3.4.21.75 GO:0004252 ... P09958 38385828
    42781 8oz5:A (2.04) BS05 CA N/A GO:0005737 ... A0A193DUB4 N/A
    42782 8oz5:B (2.04) BS05 CA N/A GO:0005737 ... A0A193DUB4 N/A
    42783 8oz5:C (2.04) BS05 CA N/A GO:0005737 ... A0A193DUB4 N/A
    42784 8oz5:D (2.04) BS05 CA N/A GO:0005737 ... A0A193DUB4 N/A
    42785 8oz5:E (2.04) BS05 CA N/A GO:0005737 ... A0A193DUB4 N/A
    42786 8oz5:F (2.04) BS05 CA N/A GO:0005737 ... A0A193DUB4 N/A
    42787 8p02:A (2.3) BS05 CA N/A GO:0005737 ... A0A193DUB4 N/A
    42788 8p02:B (2.3) BS05 CA N/A GO:0005737 ... A0A193DUB4 N/A
    42789 8p02:C (2.3) BS05 CA N/A GO:0005737 ... A0A193DUB4 N/A
    42790 8p02:D (2.3) BS05 CA N/A GO:0005737 ... A0A193DUB4 N/A
    42791 8p02:E (2.3) BS05 CA N/A GO:0005737 ... A0A193DUB4 N/A
    42792 8p02:F (2.3) BS05 CA N/A GO:0005737 ... A0A193DUB4 N/A
    42793 8p3a:A (-1.00) BS01 CA 3.4.24.- GO:0008233 ... Q6QGP7 N/A
    42794 8p5r:A (4.562) BS02 CA 1.2.4.2
    2.2.1.5
    2.3.1.61
    4.1.1.71    		 GO:0000287 ... A0R2B1 37563123
    42795 8p5r:B (4.562) BS03 CA 1.2.4.2
    2.2.1.5
    2.3.1.61
    4.1.1.71    		 GO:0000287 ... A0R2B1 37563123
    42796 8p5r:C (4.562) BS02 CA 1.2.4.2
    2.2.1.5
    2.3.1.61
    4.1.1.71    		 GO:0000287 ... A0R2B1 37563123
    42797 8p5r:D (4.562) BS03 CA 1.2.4.2
    2.2.1.5
    2.3.1.61
    4.1.1.71    		 GO:0000287 ... A0R2B1 37563123
    42798 8p5r:E (4.562) BS02 CA 1.2.4.2
    2.2.1.5
    2.3.1.61
    4.1.1.71    		 GO:0000287 ... A0R2B1 37563123
    42799 8p5r:F (4.562) BS03 CA 1.2.4.2
    2.2.1.5
    2.3.1.61
    4.1.1.71    		 GO:0000287 ... A0R2B1 37563123
    42800 8paq:A (1.6) BS01 CA 1.10.3.2 N/A A0A9P6DGH0 37483125
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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