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BioLiP
Download all results in tab-seperated text for 44457 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    40401 8ayr:A (2.7) BS02 CA ? GO:0004560 ... B2UQE4 37005422
    40402 8ayr:B (2.7) BS01 CA ? GO:0004560 ... B2UQE4 37005422
    40403 8ayr:B (2.7) BS02 CA ? GO:0004560 ... B2UQE4 37005422
    40404 8b04:A (1.6) BS02 CA 3.4.21.36 GO:0004252 ... P00772 N/A
    40405 8b0f:D (3.0) BS01 CA ? GO:0005579 ... P07358 36797260
    40406 8b0f:E (3.0) BS01 CA ? GO:0005579 ... P07357 36797260
    40407 8b0v:A (1.7) BS01 CA 3.4.21.88 GO:0003677 ... P37452 N/A
    40408 8b0v:B (1.7) BS01 CA 3.4.21.88 GO:0003677 ... P37452 N/A
    40409 8b1w:A (1.7) BS03 CA 3.5.2.6 GO:0016787 ... F6IAY7 38139809
    40410 8b1w:A (1.7) BS04 CA 3.5.2.6 GO:0016787 ... F6IAY7 38139809
    40411 8b1w:B (1.7) BS03 CA 3.5.2.6 GO:0016787 ... F6IAY7 38139809
    40412 8b1w:B (1.7) BS04 CA 3.5.2.6 GO:0016787 ... F6IAY7 38139809
    40413 8b1y:A (1.12) BS01 CA 3.4.21.36 GO:0004252 ... P00772 N/A
    40414 8b1z:A (1.6) BS03 CA 3.5.2.6 GO:0016787 ... F6IAY7 38139809
    40415 8b20:A (1.78) BS03 CA 3.5.2.6 GO:0016787 ... F6IAY7 38139809
    40416 8b20:A (1.78) BS04 CA 3.5.2.6 GO:0016787 ... F6IAY7 38139809
    40417 8b20:B (1.78) BS03 CA 3.5.2.6 GO:0016787 ... F6IAY7 38139809
    40418 8b2j:A (2.174) BS02 CA ? GO:0002218 ... Q86WV6 N/A
    40419 8b2j:B (2.174) BS02 CA ? GO:0002218 ... Q86WV6 N/A
    40420 8b2n:A (1.85) BS01 CA 3.4.24.65 GO:0004222 ... P39900 36755705
    40421 8b2n:A (1.85) BS02 CA 3.4.24.65 GO:0004222 ... P39900 36755705
    40422 8b2n:A (1.85) BS03 CA 3.4.24.65 GO:0004222 ... P39900 36755705
    40423 8b2n:C (1.85) BS01 CA 3.4.24.65 GO:0004222 ... P39900 36755705
    40424 8b2n:C (1.85) BS02 CA 3.4.24.65 GO:0004222 ... P39900 36755705
    40425 8b2n:C (1.85) BS03 CA 3.4.24.65 GO:0004222 ... P39900 36755705
    40426 8b2q:A (1.35) BS03 CA 3.4.24.- GO:0004222 ... D0EM77 36755705
    40427 8b49:A (1.19) BS02 CA 3.4.21.36 GO:0004252 ... P00772 N/A
    40428 8b4v:A (1.6) BS02 CA 3.4.21.75 GO:0004252 ... P09958 38385828
    40429 8b4v:A (1.6) BS03 CA 3.4.21.75 GO:0004252 ... P09958 38385828
    40430 8b4v:A (1.6) BS04 CA 3.4.21.75 GO:0004252 ... P09958 38385828
    40431 8b4w:A (1.6) BS03 CA 3.4.21.75 GO:0004252 ... P09958 38385828
    40432 8b4w:A (1.6) BS04 CA 3.4.21.75 GO:0004252 ... P09958 38385828
    40433 8b4w:A (1.6) BS05 CA 3.4.21.75 GO:0004252 ... P09958 38385828
    40434 8b4x:A (1.6) BS02 CA 3.4.21.75 GO:0004252 ... P09958 38385828
    40435 8b4x:A (1.6) BS03 CA 3.4.21.75 GO:0004252 ... P09958 38385828
    40436 8b4x:A (1.6) BS04 CA 3.4.21.75 GO:0004252 ... P09958 38385828
    40437 8b53:A (1.25) BS02 CA 3.4.21.36 GO:0004252 ... P00772 N/A
    40438 8b67:A (2.6) BS03 CA 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P21951 37819038
    40439 8b67:A (2.6) BS04 CA 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P21951 37819038
    40440 8b67:A (2.6) BS05 CA 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P21951 37819038
    40441 8b6g:CA (3.0) BS01 CA 1.3.5.1 GO:0005743 ... Q23DI3 36949187
    40442 8b6g:CB (3.0) BS04 CA 1.3.5.1 GO:0005743 ... I7M403 36949187
    40443 8b6h:DA (2.6) BS05 CA 7.1.1.9 GO:0004129 ... Q950Y4 36949187
    40444 8b6h:Da (2.6) BS05 CA 7.1.1.9 GO:0004129 ... Q950Y4 36949187
    40445 8b6k:A (2.5) BS03 CA 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P21951 37819038
    40446 8b6k:B (2.5) BS04 CA 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P21951 37819038
    40447 8b6q:A (2.6) BS01 CA 3.8.1.5 GO:0000086 ... P0A3G3
    P0DP23    		 N/A
    40448 8b6q:A (2.6) BS02 CA 3.8.1.5 GO:0000086 ... P0A3G3
    P0DP23    		 N/A
    40449 8b6q:A (2.6) BS03 CA 3.8.1.5 GO:0000086 ... P0A3G3
    P0DP23    		 N/A
    40450 8b6q:A (2.6) BS04 CA 3.8.1.5 GO:0000086 ... P0A3G3
    P0DP23    		 N/A
    40451 8b6q:A (2.6) BS05 CA 3.8.1.5 GO:0000086 ... P0A3G3
    P0DP23    		 N/A
    40452 8b6q:A (2.6) BS06 CA 3.8.1.5 GO:0000086 ... P0A3G3
    P0DP23    		 N/A
    40453 8b76:A (2.6) BS03 CA 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P21951 37819038
    40454 8b76:A (2.6) BS04 CA 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P21951 37819038
    40455 8b76:B (2.6) BS05 CA 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P21951 37819038
    40456 8b76:B (2.6) BS06 CA 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P21951 37819038
    40457 8b77:A (2.7) BS04 CA 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P21951 37819038
    40458 8b79:A (2.65) BS04 CA 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P21951 37819038
    40459 8b79:A (2.65) BS05 CA 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P21951 37819038
    40460 8b79:A (2.65) BS06 CA 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P21951 37819038
    40461 8b79:B (2.65) BS05 CA 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P21951 37819038
    40462 8b79:B (2.65) BS06 CA 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P21951 37819038
    40463 8b79:B (2.65) BS07 CA 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P21951 37819038
    40464 8b7a:A (2.25) BS02 CA 3.6.5.- GO:0000226 ... P81947 36468686
    40465 8b7a:C (2.25) BS02 CA 3.6.5.- GO:0000226 ... P81947 36468686
    40466 8b7b:A (2.25) BS02 CA 3.6.5.- GO:0000226 ... P81947 36468686
    40467 8b7b:C (2.25) BS02 CA 3.6.5.- GO:0000226 ... P81947 36468686
    40468 8b7c:A (1.9) BS02 CA 3.6.5.- GO:0000226 ... P81947 36468686
    40469 8b7c:C (1.9) BS02 CA 3.6.5.- GO:0000226 ... P81947 36468686
    40470 8b7e:A (2.6) BS04 CA 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P21951 37819038
    40471 8b7e:B (2.6) BS06 CA 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P21951 37819038
    40472 8b8j:A (2.96) BS01 CA ? GO:0002407 ... Q6P9J9 36335104
    40473 8b8j:A (2.96) BS02 CA ? GO:0002407 ... Q6P9J9 36335104
    40474 8b8j:A (2.96) BS03 CA ? GO:0002407 ... Q6P9J9 36335104
    40475 8b8j:B (2.96) BS01 CA ? GO:0002407 ... Q6P9J9 36335104
    40476 8b8j:B (2.96) BS02 CA ? GO:0002407 ... Q6P9J9 36335104
    40477 8b8j:B (2.96) BS03 CA ? GO:0002407 ... Q6P9J9 36335104
    40478 8b8k:A (3.01) BS01 CA ? GO:0002407 ... Q6P9J9 36335104
    40479 8b8k:A (3.01) BS02 CA ? GO:0002407 ... Q6P9J9 36335104
    40480 8b8k:A (3.01) BS03 CA ? GO:0002407 ... Q6P9J9 36335104
    40481 8b8k:B (3.01) BS01 CA ? GO:0002407 ... Q6P9J9 36335104
    40482 8b8k:B (3.01) BS02 CA ? GO:0002407 ... Q6P9J9 36335104
    40483 8b8k:B (3.01) BS03 CA ? GO:0002407 ... Q6P9J9 36335104
    40484 8b8m:A (3.49) BS01 CA ? GO:0002407 ... Q6P9J9 36335104
    40485 8b8m:A (3.49) BS02 CA ? GO:0002407 ... Q6P9J9 36335104
    40486 8b8m:A (3.49) BS03 CA ? GO:0002407 ... Q6P9J9 36335104
    40487 8b8m:B (3.49) BS01 CA ? GO:0002407 ... Q6P9J9 36335104
    40488 8b8m:B (3.49) BS02 CA ? GO:0002407 ... Q6P9J9 36335104
    40489 8b8m:B (3.49) BS03 CA ? GO:0002407 ... Q6P9J9 36335104
    40490 8b8q:A (2.94) BS01 CA ? GO:0002407 ... Q6P9J9 36335104
    40491 8b8q:A (2.94) BS02 CA ? GO:0002407 ... Q6P9J9 36335104
    40492 8b8q:A (2.94) BS03 CA ? GO:0002407 ... Q6P9J9 36335104
    40493 8b8q:B (2.94) BS01 CA ? GO:0002407 ... Q6P9J9 36335104
    40494 8b8q:B (2.94) BS02 CA ? GO:0002407 ... Q6P9J9 36335104
    40495 8b8q:B (2.94) BS03 CA ? GO:0002407 ... Q6P9J9 36335104
    40496 8bad:A (1.81) BS01 CA ? GO:0035821 ... A0A4V1G8Q1 36548760
    40497 8bad:B (1.81) BS01 CA ? GO:0035821 ... A0A4V1G8Q1 36548760
    40498 8ban:C (2.35) BS01 CA ? GO:0005509 ... Q91WD9 38593081
    40499 8ban:C (2.35) BS02 CA ? GO:0005509 ... Q91WD9 38593081
    40500 8ban:C (2.35) BS03 CA ? GO:0005509 ... Q91WD9 38593081
    40501 8ban:C (2.35) BS04 CA ? GO:0005509 ... Q91WD9 38593081
    40502 8ban:D (2.35) BS01 CA ? GO:0005509 ... Q91WD9 38593081
    40503 8ban:D (2.35) BS02 CA ? GO:0005509 ... Q91WD9 38593081
    40504 8ban:D (2.35) BS03 CA ? GO:0005509 ... Q91WD9 38593081
    40505 8ban:D (2.35) BS04 CA ? GO:0005509 ... Q91WD9 38593081
    40506 8bap:A (2.3) BS03 CA 1.1.3.38 GO:0000166 ... Q0SBK1 38026814
    40507 8bap:B (2.3) BS03 CA 1.1.3.38 GO:0000166 ... Q0SBK1 38026814
    40508 8bap:F (2.3) BS03 CA 1.1.3.38 GO:0000166 ... Q0SBK1 38026814
    40509 8bap:J (2.3) BS03 CA 1.1.3.38 GO:0000166 ... Q0SBK1 38026814
    40510 8bap:M (2.3) BS03 CA 1.1.3.38 GO:0000166 ... Q0SBK1 38026814
    40511 8bap:N (2.3) BS03 CA 1.1.3.38 GO:0000166 ... Q0SBK1 38026814
    40512 8bap:O (2.3) BS03 CA 1.1.3.38 GO:0000166 ... Q0SBK1 38026814
    40513 8bav:C (2.3) BS01 CA ? GO:0005509 ... O76038 38593081
    40514 8bav:C (2.3) BS02 CA ? GO:0005509 ... O76038 38593081
    40515 8bav:C (2.3) BS03 CA ? GO:0005509 ... O76038 38593081
    40516 8bav:C (2.3) BS04 CA ? GO:0005509 ... O76038 38593081
    40517 8bav:D (2.3) BS01 CA ? GO:0005509 ... O76038 38593081
    40518 8bav:D (2.3) BS02 CA ? GO:0005509 ... O76038 38593081
    40519 8bav:D (2.3) BS03 CA ? GO:0005509 ... O76038 38593081
    40520 8bav:D (2.3) BS04 CA ? GO:0005509 ... O76038 38593081
    40521 8bay:A (2.35) BS04 CA 1.1.1.42 GO:0000287 ... O75874 36621625
    40522 8bay:B (2.35) BS01 CA 1.1.1.42 GO:0000287 ... O75874 36621625
    40523 8bay:C (2.35) BS04 CA 1.1.1.42 GO:0000287 ... O75874 36621625
    40524 8bbj:C (2.65) BS01 CA ? GO:0005509 ... Q91WD9 38593081
    40525 8bbj:C (2.65) BS02 CA ? GO:0005509 ... Q91WD9 38593081
    40526 8bbj:C (2.65) BS03 CA ? GO:0005509 ... Q91WD9 38593081
    40527 8bbj:C (2.65) BS04 CA ? GO:0005509 ... Q91WD9 38593081
    40528 8bbj:D (2.65) BS01 CA ? GO:0005509 ... Q91WD9 38593081
    40529 8bbj:D (2.65) BS02 CA ? GO:0005509 ... Q91WD9 38593081
    40530 8bbj:D (2.65) BS03 CA ? GO:0005509 ... Q91WD9 38593081
    40531 8bbj:D (2.65) BS04 CA ? GO:0005509 ... Q91WD9 38593081
    40532 8bbt:A (1.69) BS01 CA ? GO:0046872 ... A0A0B4VFQ3 37443157
    40533 8bc0:A (3.09) BS01 CA ? GO:0002407 ... Q6P9J9 36335104
    40534 8bc0:A (3.09) BS02 CA ? GO:0002407 ... Q6P9J9 36335104
    40535 8bc0:A (3.09) BS03 CA ? GO:0002407 ... Q6P9J9 36335104
    40536 8bc0:B (3.09) BS01 CA ? GO:0002407 ... Q6P9J9 36335104
    40537 8bc0:B (3.09) BS02 CA ? GO:0002407 ... Q6P9J9 36335104
    40538 8bc0:B (3.09) BS03 CA ? GO:0002407 ... Q6P9J9 36335104
    40539 8bc1:A (2.93) BS01 CA ? GO:0002407 ... Q6P9J9 36335104
    40540 8bc1:A (2.93) BS02 CA ? GO:0002407 ... Q6P9J9 36335104
    40541 8bc1:A (2.93) BS03 CA ? GO:0002407 ... Q6P9J9 36335104
    40542 8bc1:B (2.93) BS01 CA ? GO:0002407 ... Q6P9J9 36335104
    40543 8bc1:B (2.93) BS02 CA ? GO:0002407 ... Q6P9J9 36335104
    40544 8bc1:B (2.93) BS03 CA ? GO:0002407 ... Q6P9J9 36335104
    40545 8bc5:A (1.91) BS01 CA ? GO:0046872 ... A0A0B4VFQ3 37443157
    40546 8bck:A (1.96) BS01 CA ? GO:0046872 ... A0A0B4VFQ3 37443157
    40547 8bd2:A (-1.00) BS01 CA ? GO:0000086 ... P0DP25 37995470
    40548 8bd2:A (-1.00) BS02 CA ? GO:0000086 ... P0DP25 37995470
    40549 8bde:A (1.902) BS02 CA 3.6.5.- GO:0000226 ... P81947 36876916
    40550 8bde:C (1.902) BS02 CA 3.6.5.- GO:0000226 ... P81947 36876916
    40551 8bdf:A (1.95) BS02 CA 3.6.5.- GO:0000226 ... P81947 36876916
    40552 8bdg:A (2.35) BS02 CA 3.6.5.- GO:0000226 ... P81947 36876916
    40553 8bgw:A (2.2) BS04 CA N/A GO:0004129 ... N/A 37296134
    40554 8bgw:B (2.2) BS09 CA N/A GO:0004129 ... N/A 37296134
    40555 8bhh:A (1.69) BS01 CA 3.1.1.-
    3.1.1.73    		 GO:0030600 ... A0A2H3G048 36961270
    40556 8bhh:B (1.69) BS03 CA 3.1.1.-
    3.1.1.73    		 GO:0030600 ... A0A2H3G048 36961270
    40557 8blj:A (2.18) BS01 CA ? GO:0015276 ... Q9ULK0 38060673
    40558 8blj:B (2.18) BS01 CA ? GO:0015276 ... Q9ULK0 38060673
    40559 8blj:B (2.18) BS02 CA ? GO:0015276 ... Q9ULK0 38060673
    40560 8blj:C (2.18) BS01 CA ? GO:0015276 ... Q9ULK0 38060673
    40561 8blj:C (2.18) BS02 CA ? GO:0015276 ... Q9ULK0 38060673
    40562 8blj:D (2.18) BS01 CA ? GO:0015276 ... Q9ULK0 38060673
    40563 8blj:E (2.18) BS01 CA ? GO:0015276 ... Q9ULK0 38060673
    40564 8blj:F (2.18) BS01 CA ? GO:0015276 ... Q9ULK0 38060673
    40565 8blj:F (2.18) BS02 CA ? GO:0015276 ... Q9ULK0 38060673
    40566 8bn2:A (1.63) BS01 CA ? GO:0015276 ... Q9ULK0 38060673
    40567 8bn2:B (1.63) BS01 CA ? GO:0015276 ... Q9ULK0 38060673
    40568 8bn5:A (1.9) BS01 CA ? GO:0015276 ... Q9ULK0 38060673
    40569 8bn5:B (1.9) BS01 CA ? GO:0015276 ... Q9ULK0 38060673
    40570 8bn6:A (1.6) BS01 CA 5.6.2.2 GO:0003677 ... Q9I7C2 36877255
    40571 8bo8:A (1.55) BS04 CA 3.4.17.21 GO:0004180 ... Q04609 N/A
    40572 8bol:A (1.55) BS04 CA 3.4.17.21 GO:0004180 ... Q04609 N/A
    40573 8bow:A (1.58) BS04 CA 3.4.17.21 GO:0004180 ... Q04609 N/A
    40574 8boz:A (3.6) BS01 CA ? GO:0046872 ... A0A0H2VAD3 36675258
    40575 8boz:C (3.6) BS01 CA ? GO:0046872 ... A0A0H2VAD3 36675258
    40576 8boz:E (3.6) BS01 CA ? GO:0046872 ... A0A0H2VAD3 36675258
    40577 8boz:G (3.6) BS01 CA ? GO:0046872 ... A0A0H2VAD3 36675258
    40578 8boz:I (3.6) BS01 CA ? GO:0046872 ... A0A0H2VAD3 36675258
    40579 8boz:K (3.6) BS01 CA ? GO:0046872 ... A0A0H2VAD3 36675258
    40580 8boz:M (3.6) BS01 CA ? GO:0046872 ... A0A0H2VAD3 36675258
    40581 8boz:O (3.6) BS01 CA ? GO:0046872 ... A0A0H2VAD3 36675258
    40582 8bp8:D (2.7) BS01 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    40583 8bp8:D (2.7) BS02 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    40584 8bp8:D (2.7) BS03 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    40585 8bp8:E (2.7) BS01 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    40586 8bp8:E (2.7) BS02 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    40587 8bp8:E (2.7) BS03 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    40588 8bp8:F (2.7) BS01 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    40589 8bp8:F (2.7) BS02 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    40590 8bp8:F (2.7) BS03 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    40591 8bp8:G (2.7) BS01 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    40592 8bp8:G (2.7) BS02 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    40593 8bp8:G (2.7) BS03 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    40594 8bp8:H (2.7) BS01 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    40595 8bp8:H (2.7) BS02 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    40596 8bp8:H (2.7) BS03 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    40597 8bp8:I (2.7) BS01 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    40598 8bp8:I (2.7) BS02 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    40599 8bp8:I (2.7) BS03 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    40600 8bp8:J (2.7) BS01 CA ? GO:0016020 ... A0A1Q2TSM6 36996819
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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