Home Research COVID-19 Services Publications People Teaching Job Opening News Forum Lab Only
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 44457 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    39001 7ums:n (3.5) BS01 CA ? GO:0016020 ... B1NP55 35924923
    39002 7ums:n (3.5) BS02 CA ? GO:0016020 ... B1NP55 35924923
    39003 7ums:n (3.5) BS03 CA ? GO:0016020 ... B1NP55 35924923
    39004 7ums:n (3.5) BS04 CA ? GO:0016020 ... B1NP55 35924923
    39005 7ums:o (3.5) BS01 CA ? GO:0016020 ... B1NP55 35924923
    39006 7ums:o (3.5) BS02 CA ? GO:0016020 ... B1NP55 35924923
    39007 7ums:o (3.5) BS03 CA ? GO:0016020 ... B1NP55 35924923
    39008 7ums:o (3.5) BS04 CA ? GO:0016020 ... B1NP55 35924923
    39009 7ums:p (3.5) BS01 CA ? GO:0016020 ... B1NP55 35924923
    39010 7ums:p (3.5) BS02 CA ? GO:0016020 ... B1NP55 35924923
    39011 7ums:p (3.5) BS03 CA ? GO:0016020 ... B1NP55 35924923
    39012 7ums:p (3.5) BS04 CA ? GO:0016020 ... B1NP55 35924923
    39013 7ums:q (3.5) BS01 CA ? GO:0016020 ... B1NP55 35924923
    39014 7ums:q (3.5) BS02 CA ? GO:0016020 ... B1NP55 35924923
    39015 7ums:q (3.5) BS03 CA ? GO:0016020 ... B1NP55 35924923
    39016 7ums:q (3.5) BS04 CA ? GO:0016020 ... B1NP55 35924923
    39017 7ums:r (3.5) BS01 CA ? GO:0016020 ... B1NP55 35924923
    39018 7ums:r (3.5) BS02 CA ? GO:0016020 ... B1NP55 35924923
    39019 7ums:r (3.5) BS03 CA ? GO:0016020 ... B1NP55 35924923
    39020 7ums:r (3.5) BS04 CA ? GO:0016020 ... B1NP55 35924923
    39021 7umt:a (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    39022 7umt:a (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    39023 7umt:a (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    39024 7umt:a (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    39025 7umt:b (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    39026 7umt:b (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    39027 7umt:b (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    39028 7umt:b (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    39029 7umt:c (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    39030 7umt:c (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    39031 7umt:c (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    39032 7umt:c (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    39033 7umt:d (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    39034 7umt:d (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    39035 7umt:d (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    39036 7umt:d (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    39037 7umt:e (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    39038 7umt:e (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    39039 7umt:e (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    39040 7umt:e (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    39041 7umt:f (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    39042 7umt:f (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    39043 7umt:f (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    39044 7umt:f (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    39045 7umt:g (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    39046 7umt:g (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    39047 7umt:g (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    39048 7umt:g (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    39049 7umt:h (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    39050 7umt:h (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    39051 7umt:h (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    39052 7umt:h (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    39053 7umt:i (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    39054 7umt:i (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    39055 7umt:i (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    39056 7umt:i (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    39057 7umt:j (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    39058 7umt:j (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    39059 7umt:j (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    39060 7umt:j (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    39061 7umt:k (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    39062 7umt:k (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    39063 7umt:k (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    39064 7umt:k (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    39065 7umt:l (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    39066 7umt:l (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    39067 7umt:l (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    39068 7umt:l (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    39069 7umt:m (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    39070 7umt:m (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    39071 7umt:m (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    39072 7umt:m (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    39073 7umt:n (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    39074 7umt:n (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    39075 7umt:n (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    39076 7umt:n (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    39077 7umt:o (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    39078 7umt:o (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    39079 7umt:o (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    39080 7umt:o (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    39081 7umt:p (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    39082 7umt:p (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    39083 7umt:p (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    39084 7umt:p (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    39085 7umt:q (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    39086 7umt:q (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    39087 7umt:q (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    39088 7umt:q (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    39089 7umt:r (3.4) BS01 CA ? GO:0016020 ... B1NP55 35924923
    39090 7umt:r (3.4) BS02 CA ? GO:0016020 ... B1NP55 35924923
    39091 7umt:r (3.4) BS03 CA ? GO:0016020 ... B1NP55 35924923
    39092 7umt:r (3.4) BS04 CA ? GO:0016020 ... B1NP55 35924923
    39093 7un2:A (1.8) BS01 CA ? GO:0030246 ... A0A6M6R659
    A0A8E6Z6W6    		 N/A
    39094 7un2:B (1.8) BS01 CA ? GO:0030246 ... A0A6M6R659
    A0A8E6Z6W6    		 N/A
    39095 7un7:A (2.04) BS06 CA 2.7.7.7
    4.2.99.-    		 GO:0003677 ... Q9UGP5 36536104
    39096 7un7:A (2.04) BS07 CA 2.7.7.7
    4.2.99.-    		 GO:0003677 ... Q9UGP5 36536104
    39097 7unp:A (2.0) BS01 CA 3.2.1.- GO:0004553 ... A3DCY5 36990218
    39098 7unp:A (2.0) BS02 CA 3.2.1.- GO:0004553 ... A3DCY5 36990218
    39099 7uod:A (1.6) BS02 CA ? GO:0030246 ... A0A6M6R659
    A0A8E6Z6W6    		 N/A
    39100 7uod:B (1.6) BS02 CA ? GO:0030246 ... A0A6M6R659
    A0A8E6Z6W6    		 N/A
    39101 7uox:A (0.99) BS01 CA 3.5.2.6 GO:0008800 ... E9NWK5 36475645
    39102 7uq2:A (2.0) BS02 CA ? GO:0000166 ... P13314 36848932
    39103 7uqu:AAA (1.976) BS01 CA ? GO:0005509 ... Q99PF4 N/A
    39104 7uqu:BBB (1.976) BS01 CA ? GO:0005509 ... Q99PF4 N/A
    39105 7urp:A (1.03) BS01 CA ? GO:0030246 ... A0A2N0UYJ0 N/A
    39106 7usf:A (3.5) BS04 CA 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.26.4
    3.4.23.-
    3.6.1.23    		 GO:0003676 ... P03365 35947647
    39107 7usl:A (2.7) BS01 CA ? GO:0001540 ... P11215 35977491
    39108 7usl:A (2.7) BS02 CA ? GO:0001540 ... P11215 35977491
    39109 7usl:A (2.7) BS03 CA ? GO:0001540 ... P11215 35977491
    39110 7usl:B (2.7) BS01 CA ? GO:0001540 ... P05107 35977491
    39111 7usl:C (2.7) BS01 CA 4.6.1.1 GO:0005509 ... P0DKX7 35977491
    39112 7usl:C (2.7) BS02 CA 4.6.1.1 GO:0005509 ... P0DKX7 35977491
    39113 7usl:C (2.7) BS03 CA 4.6.1.1 GO:0005509 ... P0DKX7 35977491
    39114 7usl:C (2.7) BS04 CA 4.6.1.1 GO:0005509 ... P0DKX7 35977491
    39115 7usl:C (2.7) BS05 CA 4.6.1.1 GO:0005509 ... P0DKX7 35977491
    39116 7usl:C (2.7) BS06 CA 4.6.1.1 GO:0005509 ... P0DKX7 35977491
    39117 7usl:C (2.7) BS07 CA 4.6.1.1 GO:0005509 ... P0DKX7 35977491
    39118 7usl:C (2.7) BS08 CA 4.6.1.1 GO:0005509 ... P0DKX7 35977491
    39119 7usl:C (2.7) BS09 CA 4.6.1.1 GO:0005509 ... P0DKX7 35977491
    39120 7usl:C (2.7) BS10 CA 4.6.1.1 GO:0005509 ... P0DKX7 35977491
    39121 7usl:C (2.7) BS11 CA 4.6.1.1 GO:0005509 ... P0DKX7 35977491
    39122 7usl:C (2.7) BS12 CA 4.6.1.1 GO:0005509 ... P0DKX7 35977491
    39123 7usl:C (2.7) BS13 CA 4.6.1.1 GO:0005509 ... P0DKX7 35977491
    39124 7usl:C (2.7) BS14 CA 4.6.1.1 GO:0005509 ... P0DKX7 35977491
    39125 7usl:C (2.7) BS15 CA 4.6.1.1 GO:0005509 ... P0DKX7 35977491
    39126 7usl:C (2.7) BS16 CA 4.6.1.1 GO:0005509 ... P0DKX7 35977491
    39127 7usl:C (2.7) BS17 CA 4.6.1.1 GO:0005509 ... P0DKX7 35977491
    39128 7usl:C (2.7) BS18 CA 4.6.1.1 GO:0005509 ... P0DKX7 35977491
    39129 7usl:C (2.7) BS19 CA 4.6.1.1 GO:0005509 ... P0DKX7 35977491
    39130 7usl:C (2.7) BS20 CA 4.6.1.1 GO:0005509 ... P0DKX7 35977491
    39131 7usl:C (2.7) BS21 CA 4.6.1.1 GO:0005509 ... P0DKX7 35977491
    39132 7usl:C (2.7) BS22 CA 4.6.1.1 GO:0005509 ... P0DKX7 35977491
    39133 7usl:C (2.7) BS23 CA 4.6.1.1 GO:0005509 ... P0DKX7 35977491
    39134 7usl:C (2.7) BS24 CA 4.6.1.1 GO:0005509 ... P0DKX7 35977491
    39135 7usl:C (2.7) BS25 CA 4.6.1.1 GO:0005509 ... P0DKX7 35977491
    39136 7usl:C (2.7) BS26 CA 4.6.1.1 GO:0005509 ... P0DKX7 35977491
    39137 7usl:C (2.7) BS27 CA 4.6.1.1 GO:0005509 ... P0DKX7 35977491
    39138 7usl:C (2.7) BS28 CA 4.6.1.1 GO:0005509 ... P0DKX7 35977491
    39139 7usl:C (2.7) BS29 CA 4.6.1.1 GO:0005509 ... P0DKX7 35977491
    39140 7usm:A (2.7) BS01 CA ? GO:0001540 ... P11215 35977491
    39141 7usm:A (2.7) BS02 CA ? GO:0001540 ... P11215 35977491
    39142 7usm:A (2.7) BS03 CA ? GO:0001540 ... P11215 35977491
    39143 7usm:B (2.7) BS01 CA ? GO:0001540 ... P05107 35977491
    39144 7usw:A (3.1) BS01 CA ? GO:0005216 ... D3KZG3 36224384
    39145 7usw:B (3.1) BS01 CA ? GO:0005216 ... D3KZG3 36224384
    39146 7usw:C (3.1) BS01 CA ? GO:0000287 ... Q93640 36224384
    39147 7usw:C (3.1) BS02 CA ? GO:0000287 ... Q93640 36224384
    39148 7usw:E (3.1) BS01 CA ? GO:0000287 ... Q93640 36224384
    39149 7usw:E (3.1) BS02 CA ? GO:0000287 ... Q93640 36224384
    39150 7usx:A (3.09) BS01 CA ? GO:0005216 ... D3KZG3 36224384
    39151 7usx:B (3.09) BS01 CA ? GO:0005216 ... D3KZG3 36224384
    39152 7usx:C (3.09) BS01 CA ? GO:0000287 ... Q93640 36224384
    39153 7usx:C (3.09) BS02 CA ? GO:0000287 ... Q93640 36224384
    39154 7usx:E (3.09) BS01 CA ? GO:0000287 ... Q93640 36224384
    39155 7usx:E (3.09) BS02 CA ? GO:0000287 ... Q93640 36224384
    39156 7usy:A (3.54) BS01 CA ? GO:0005216 ... D3KZG3 36224384
    39157 7usy:B (3.54) BS01 CA ? GO:0005216 ... D3KZG3 36224384
    39158 7usy:B (3.54) BS02 CA ? GO:0005216 ... D3KZG3 36224384
    39159 7usy:C (3.54) BS01 CA ? GO:0000287 ... Q93640 36224384
    39160 7usy:C (3.54) BS02 CA ? GO:0000287 ... Q93640 36224384
    39161 7usy:E (3.54) BS01 CA ? GO:0000287 ... Q93640 36224384
    39162 7uti:U (4.8) BS01 CA ? GO:0002086 ... P63316 32521240
    39163 7uti:U (4.8) BS02 CA ? GO:0002086 ... P63316 32521240
    39164 7uti:U (4.8) BS03 CA ? GO:0002086 ... P63316 32521240
    39165 7uti:Z (4.8) BS01 CA ? GO:0002086 ... P63316 32521240
    39166 7uti:Z (4.8) BS02 CA ? GO:0002086 ... P63316 32521240
    39167 7uti:Z (4.8) BS03 CA ? GO:0002086 ... P63316 32521240
    39168 7uwu:A (2.19) BS01 CA ? GO:0030245 ... A0A2N0UYM2 38177679
    39169 7uwu:A (2.19) BS02 CA ? GO:0030245 ... A0A2N0UYM2 38177679
    39170 7uwu:A (2.19) BS03 CA ? GO:0030245 ... A0A2N0UYM2 38177679
    39171 7uwu:A (2.19) BS04 CA ? GO:0030245 ... A0A2N0UYM2 38177679
    39172 7uwu:B (2.19) BS01 CA ? GO:0030245 ... A0A2N0UYM2 38177679
    39173 7uwu:B (2.19) BS02 CA ? GO:0030245 ... A0A2N0UYM2 38177679
    39174 7uwu:B (2.19) BS03 CA ? GO:0030245 ... A0A2N0UYM2 38177679
    39175 7uwu:B (2.19) BS04 CA ? GO:0030245 ... A0A2N0UYM2 38177679
    39176 7uwv:A (1.7) BS09 CA ? N/A A0A2N0UYM2 38177679
    39177 7uwv:A (1.7) BS10 CA ? N/A A0A2N0UYM2 38177679
    39178 7uwv:A (1.7) BS11 CA ? N/A A0A2N0UYM2 38177679
    39179 7uww:A (1.61) BS04 CA ? GO:0030245 ... A0A2N0UYM2 38177679
    39180 7uww:A (1.61) BS05 CA ? GO:0030245 ... A0A2N0UYM2 38177679
    39181 7uww:A (1.61) BS06 CA ? GO:0030245 ... A0A2N0UYM2 38177679
    39182 7uww:A (1.61) BS07 CA ? GO:0030245 ... A0A2N0UYM2 38177679
    39183 7uww:B (1.61) BS03 CA ? GO:0030245 ... A0A2N0UYM2 38177679
    39184 7uww:B (1.61) BS04 CA ? GO:0030245 ... A0A2N0UYM2 38177679
    39185 7uww:B (1.61) BS05 CA ? GO:0030245 ... A0A2N0UYM2 38177679
    39186 7uww:B (1.61) BS06 CA ? GO:0030245 ... A0A2N0UYM2 38177679
    39187 7v0i:A (1.9) BS07 CA 3.2.1.- GO:0004553 ... A3DCY5 36990218
    39188 7v0i:B (1.9) BS07 CA 3.2.1.- GO:0004553 ... A3DCY5 36990218
    39189 7v0i:C (1.9) BS06 CA 3.2.1.- GO:0004553 ... A3DCY5 36990218
    39190 7v0j:A (2.4) BS02 CA 3.2.1.- GO:0004553 ... A3DCY5 36990218
    39191 7v0j:B (2.4) BS02 CA 3.2.1.- GO:0004553 ... A3DCY5 36990218
    39192 7v0j:C (2.4) BS03 CA 3.2.1.- GO:0004553 ... A3DCY5 36990218
    39193 7v1v:A (1.96) BS01 CA ? GO:0046872 ... A0A6L9SN29 34688653
    39194 7v1v:A (1.96) BS02 CA ? GO:0046872 ... A0A6L9SN29 34688653
    39195 7v1v:B (1.96) BS01 CA ? GO:0046872 ... A0A6L9SN29 34688653
    39196 7v1v:B (1.96) BS02 CA ? GO:0046872 ... A0A6L9SN29 34688653
    39197 7v1v:C (1.96) BS01 CA ? GO:0046872 ... A0A6L9SN29 34688653
    39198 7v1v:C (1.96) BS02 CA ? GO:0046872 ... A0A6L9SN29 34688653
    39199 7v1v:D (1.96) BS01 CA ? GO:0046872 ... A0A6L9SN29 34688653
    39200 7v1v:D (1.96) BS02 CA ? GO:0046872 ... A0A6L9SN29 34688653
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218