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BioLiP
Download all results in tab-seperated text for 44457 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    38001 7qql:C (2.44) BS03 CA ? GO:0001525 ... P07355
    Q9NY99    		 35362473
    38002 7qql:C (2.44) BS04 CA ? GO:0001525 ... P07355
    Q9NY99    		 35362473
    38003 7qql:C (2.44) BS05 CA ? GO:0001525 ... P07355
    Q9NY99    		 35362473
    38004 7qql:C (2.44) BS06 CA ? GO:0001525 ... P07355
    Q9NY99    		 35362473
    38005 7qqm:A (1.6) BS01 CA ? GO:0001525 ... P07355
    Q96NW7    		 35362473
    38006 7qqm:A (1.6) BS02 CA ? GO:0001525 ... P07355
    Q96NW7    		 35362473
    38007 7qqm:A (1.6) BS03 CA ? GO:0001525 ... P07355
    Q96NW7    		 35362473
    38008 7qqm:A (1.6) BS04 CA ? GO:0001525 ... P07355
    Q96NW7    		 35362473
    38009 7qqn:A (2.45) BS02 CA ? GO:0001525 ... P07355
    Q9NSN8    		 35362473
    38010 7qqn:A (2.45) BS03 CA ? GO:0001525 ... P07355
    Q9NSN8    		 35362473
    38011 7qqn:A (2.45) BS04 CA ? GO:0001525 ... P07355
    Q9NSN8    		 35362473
    38012 7qqn:A (2.45) BS05 CA ? GO:0001525 ... P07355
    Q9NSN8    		 35362473
    38013 7qqn:C (2.45) BS02 CA ? GO:0001525 ... P07355
    Q9NSN8    		 35362473
    38014 7qqn:C (2.45) BS03 CA ? GO:0001525 ... P07355
    Q9NSN8    		 35362473
    38015 7qqn:C (2.45) BS04 CA ? GO:0001525 ... P07355
    Q9NSN8    		 35362473
    38016 7qqn:C (2.45) BS05 CA ? GO:0001525 ... P07355
    Q9NSN8    		 35362473
    38017 7qtb:A (1.04) BS05 CA 3.1.30.1 GO:0003676 ... P24021 36189740
    38018 7qtb:B (1.04) BS05 CA 3.1.30.1 GO:0003676 ... P24021 36189740
    38019 7qth:A (1.9) BS11 CA ? N/A Q8EG34 36645302
    38020 7qth:A (1.9) BS12 CA ? N/A Q8EG34 36645302
    38021 7qth:A (1.9) BS13 CA ? N/A Q8EG34 36645302
    38022 7qth:A (1.9) BS14 CA ? N/A Q8EG34 36645302
    38023 7quv:A (1.85) BS02 CA ? GO:0002523 ... P05109 37198182
    38024 7quv:B (1.85) BS02 CA ? GO:0002523 ... P06702 37198182
    38025 7quv:B (1.85) BS03 CA ? GO:0002523 ... P06702 37198182
    38026 7qvd:AAA (1.7) BS01 CA N/A N/A N/A N/A
    38027 7qvw:AAA (1.922) BS01 CA 1.11.1.18 GO:0004601 ... O81959 N/A
    38028 7qvw:BBB (1.922) BS01 CA 1.11.1.18 GO:0004601 ... O81959 N/A
    38029 7qvw:CCC (1.922) BS01 CA 1.11.1.18 GO:0004601 ... O81959 N/A
    38030 7qvw:DDD (1.922) BS01 CA 1.11.1.18 GO:0004601 ... O81959 N/A
    38031 7qw3:AAA (1.78) BS01 CA 1.11.1.18 GO:0004601 ... O81959 N/A
    38032 7qw3:BBB (1.78) BS01 CA 1.11.1.18 GO:0004601 ... O81959 N/A
    38033 7qw3:CCC (1.78) BS01 CA 1.11.1.18 GO:0004601 ... O81959 N/A
    38034 7qw3:DDD (1.78) BS01 CA 1.11.1.18 GO:0004601 ... O81959 N/A
    38035 7qwi:AAA (2.15) BS01 CA 1.11.1.18 GO:0004601 ... O81959 N/A
    38036 7qwi:BBB (2.15) BS01 CA 1.11.1.18 GO:0004601 ... O81959 N/A
    38037 7qwi:CCC (2.15) BS01 CA 1.11.1.18 GO:0004601 ... O81959 N/A
    38038 7qwi:DDD (2.15) BS01 CA 1.11.1.18 GO:0004601 ... O81959 N/A
    38039 7qxy:A (1.478) BS01 CA 3.4.21.75 GO:0004252 ... P09958 35377598
    38040 7qxy:A (1.478) BS02 CA 3.4.21.75 GO:0004252 ... P09958 35377598
    38041 7qxy:A (1.478) BS03 CA 3.4.21.75 GO:0004252 ... P09958 35377598
    38042 7qxz:A (1.8) BS01 CA 3.4.21.75 GO:0004252 ... P09958 35377598
    38043 7qxz:A (1.8) BS02 CA 3.4.21.75 GO:0004252 ... P09958 35377598
    38044 7qxz:A (1.8) BS03 CA 3.4.21.75 GO:0004252 ... P09958 35377598
    38045 7qy0:A (1.54) BS02 CA 3.4.21.75 GO:0004252 ... P09958 35377598
    38046 7qy0:A (1.54) BS03 CA 3.4.21.75 GO:0004252 ... P09958 35377598
    38047 7qy0:A (1.54) BS04 CA 3.4.21.75 GO:0004252 ... P09958 35377598
    38048 7qy1:A (1.45) BS02 CA 3.4.21.75 GO:0004252 ... P09958 35377598
    38049 7qy1:A (1.45) BS03 CA 3.4.21.75 GO:0004252 ... P09958 35377598
    38050 7qy1:A (1.45) BS04 CA 3.4.21.75 GO:0004252 ... P09958 35377598
    38051 7qy2:A (1.55) BS02 CA 3.4.21.75 GO:0004252 ... P09958 35377598
    38052 7qy2:A (1.55) BS03 CA 3.4.21.75 GO:0004252 ... P09958 35377598
    38053 7qy2:A (1.55) BS04 CA 3.4.21.75 GO:0004252 ... P09958 35377598
    38054 7qyy:AAA (1.999) BS01 CA 1.11.1.18 GO:0004601 ... O81959 N/A
    38055 7qyy:BBB (1.999) BS01 CA 1.11.1.18 GO:0004601 ... O81959 N/A
    38056 7qyy:CCC (1.999) BS01 CA 1.11.1.18 GO:0004601 ... O81959 N/A
    38057 7qyy:DDD (1.999) BS01 CA 1.11.1.18 GO:0004601 ... O81959 N/A
    38058 7qzr:B (2.18) BS03 CA 1.11.2.2 GO:0004601 ... P05164 36150500
    38059 7qzr:D (2.18) BS03 CA 1.11.2.2 GO:0004601 ... P05164 36150500
    38060 7r1m:A (1.64) BS02 CA ? GO:0046872 ... Q7WTL3 N/A
    38061 7r1m:C (1.64) BS01 CA ? GO:0046872 ... Q7WTL3 N/A
    38062 7r2m:A (2.4) BS02 CA ? GO:0004859 ... P57105 38142947
    38063 7r2m:A (2.4) BS03 CA ? GO:0004859 ... P57105 38142947
    38064 7r2m:A (2.4) BS04 CA ? GO:0004859 ... P57105 38142947
    38065 7r2m:A (2.4) BS05 CA ? GO:0004859 ... P57105 38142947
    38066 7r2m:D (2.4) BS02 CA ? GO:0004859 ... P57105 38142947
    38067 7r2m:D (2.4) BS03 CA ? GO:0004859 ... P57105 38142947
    38068 7r2m:D (2.4) BS04 CA ? GO:0004859 ... P57105 38142947
    38069 7r2m:D (2.4) BS05 CA ? GO:0004859 ... P57105 38142947
    38070 7r2t:A (2.5) BS02 CA ? GO:0004859 ... P57105 38142947
    38071 7r2t:A (2.5) BS03 CA ? GO:0004859 ... P57105 38142947
    38072 7r2t:A (2.5) BS04 CA ? GO:0004859 ... P57105 38142947
    38073 7r3k:B (2.52) BS48 CA 1.97.1.12 GO:0000287 ... P09144 36979472
    38074 7r3x:A (2.46) BS04 CA 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P21951 35822874
    38075 7r3x:A (2.46) BS05 CA 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P21951 35822874
    38076 7r3y:A (2.6) BS04 CA 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P21951 35822874
    38077 7r3y:A (2.6) BS05 CA 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P21951 35822874
    38078 7r3y:B (2.6) BS06 CA 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P21951 35822874
    38079 7r3y:B (2.6) BS07 CA 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P21951 35822874
    38080 7r4j:A (2.95) BS01 CA 2.7.1.23 GO:0003951 ... Q4G0N4 35868311
    38081 7r4j:A (2.95) BS02 CA 2.7.1.23 GO:0003951 ... Q4G0N4 35868311
    38082 7r5i:A (1.08) BS02 CA ? GO:0046872 ... Q7WTL3 N/A
    38083 7r5i:B (1.08) BS02 CA ? GO:0046872 ... Q7WTL3 N/A
    38084 7r5i:C (1.08) BS01 CA ? GO:0046872 ... Q7WTL3 N/A
    38085 7r6b:B (2.03) BS01 CA 3.5.1.1 GO:0004067 ... A0A3N4B0Q2 36152020
    38086 7rac:A (2.36) BS03 CA 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    38087 7rac:B (2.36) BS03 CA 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    38088 7rac:C (2.36) BS03 CA 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    38089 7rac:D (2.36) BS03 CA 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    38090 7rac:E (2.36) BS03 CA 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    38091 7rac:F (2.36) BS03 CA 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    38092 7rac:G (2.36) BS03 CA 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    38093 7rac:H (2.36) BS03 CA 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    38094 7rac:I (2.36) BS03 CA 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    38095 7rac:J (2.36) BS03 CA 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    38096 7rac:J (2.36) BS04 CA 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    38097 7rac:K (2.36) BS03 CA 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    38098 7rac:L (2.36) BS03 CA 1.7.2.1 GO:0005507 ... F2NNS0 34605435
    38099 7rah:E (2.6) BS01 CA 4.6.1.1 GO:0005509 ... P0DKX7 34547035
    38100 7rah:E (2.6) BS02 CA 4.6.1.1 GO:0005509 ... P0DKX7 34547035
    38101 7rah:E (2.6) BS03 CA 4.6.1.1 GO:0005509 ... P0DKX7 34547035
    38102 7rah:E (2.6) BS04 CA 4.6.1.1 GO:0005509 ... P0DKX7 34547035
    38103 7rah:E (2.6) BS05 CA 4.6.1.1 GO:0005509 ... P0DKX7 34547035
    38104 7rah:E (2.6) BS06 CA 4.6.1.1 GO:0005509 ... P0DKX7 34547035
    38105 7rah:E (2.6) BS07 CA 4.6.1.1 GO:0005509 ... P0DKX7 34547035
    38106 7rah:E (2.6) BS08 CA 4.6.1.1 GO:0005509 ... P0DKX7 34547035
    38107 7rah:E (2.6) BS09 CA 4.6.1.1 GO:0005509 ... P0DKX7 34547035
    38108 7rah:E (2.6) BS10 CA 4.6.1.1 GO:0005509 ... P0DKX7 34547035
    38109 7rah:E (2.6) BS11 CA 4.6.1.1 GO:0005509 ... P0DKX7 34547035
    38110 7rah:E (2.6) BS12 CA 4.6.1.1 GO:0005509 ... P0DKX7 34547035
    38111 7rah:E (2.6) BS13 CA 4.6.1.1 GO:0005509 ... P0DKX7 34547035
    38112 7rah:E (2.6) BS14 CA 4.6.1.1 GO:0005509 ... P0DKX7 34547035
    38113 7rah:E (2.6) BS15 CA 4.6.1.1 GO:0005509 ... P0DKX7 34547035
    38114 7rah:E (2.6) BS16 CA 4.6.1.1 GO:0005509 ... P0DKX7 34547035
    38115 7rah:E (2.6) BS17 CA 4.6.1.1 GO:0005509 ... P0DKX7 34547035
    38116 7rah:E (2.6) BS18 CA 4.6.1.1 GO:0005509 ... P0DKX7 34547035
    38117 7rah:E (2.6) BS19 CA 4.6.1.1 GO:0005509 ... P0DKX7 34547035
    38118 7rbg:A (1.9) BS06 CA 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 35238634
    38119 7rbg:A (1.9) BS07 CA 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 35238634
    38120 7rbg:A (1.9) BS08 CA 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 35238634
    38121 7rbh:A (1.75) BS06 CA 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 35238634
    38122 7rbh:A (1.75) BS07 CA 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 35238634
    38123 7rbh:A (1.75) BS08 CA 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 35238634
    38124 7rcc:A (2.45) BS03 CA N/A GO:0004519 ... N/A N/A
    38125 7rcc:A (2.45) BS04 CA N/A GO:0004519 ... N/A N/A
    38126 7rcc:A (2.45) BS05 CA N/A GO:0004519 ... N/A N/A
    38127 7rcc:A (2.45) BS06 CA N/A GO:0004519 ... N/A N/A
    38128 7rcc:D (2.45) BS03 CA N/A GO:0004519 ... N/A N/A
    38129 7rcc:D (2.45) BS04 CA N/A GO:0004519 ... N/A N/A
    38130 7rcc:D (2.45) BS05 CA N/A GO:0004519 ... N/A N/A
    38131 7rcc:G (2.45) BS03 CA N/A GO:0004519 ... N/A N/A
    38132 7rcc:G (2.45) BS04 CA N/A GO:0004519 ... N/A N/A
    38133 7rcc:G (2.45) BS05 CA N/A GO:0004519 ... N/A N/A
    38134 7rcd:A (2.448) BS03 CA N/A GO:0004519 ... N/A N/A
    38135 7rcd:A (2.448) BS04 CA N/A GO:0004519 ... N/A N/A
    38136 7rce:A (2.42) BS03 CA N/A GO:0004519 ... N/A N/A
    38137 7rce:A (2.42) BS04 CA N/A GO:0004519 ... N/A N/A
    38138 7rce:A (2.42) BS05 CA N/A GO:0004519 ... N/A N/A
    38139 7rcf:A (2.233) BS03 CA N/A GO:0004519 ... N/A N/A
    38140 7rcf:A (2.233) BS04 CA N/A GO:0004519 ... N/A N/A
    38141 7rcf:A (2.233) BS05 CA N/A GO:0004519 ... N/A N/A
    38142 7rcg:A (2.368) BS03 CA N/A GO:0004519 ... N/A N/A
    38143 7rcg:A (2.368) BS04 CA N/A GO:0004519 ... N/A N/A
    38144 7rcv:C (2.01) BS15 CA ? GO:0005737 ... P09193 34937700
    38145 7rcv:K (2.01) BS03 CA ? GO:0005737 ... P15819 34937700
    38146 7rcv:U (2.01) BS01 CA ? GO:0009523 ... Q55332 34937700
    38147 7rcv:V (2.01) BS02 CA ? GO:0005506 ... Q55013 34937700
    38148 7rcv:c (2.01) BS15 CA ? GO:0005737 ... P09193 34937700
    38149 7rcv:k (2.01) BS03 CA ? GO:0005737 ... P15819 34937700
    38150 7rcv:u (2.01) BS01 CA ? GO:0009523 ... Q55332 34937700
    38151 7rcv:v (2.01) BS02 CA ? GO:0005506 ... Q55013 34937700
    38152 7rde:B (1.31) BS01 CA 4.2.3.3
    5.3.1.1    		 GO:0004807 ... P60174 35315486
    38153 7reg:A (1.77) BS03 CA 1.5.1.3 GO:0004146 ... P00382 35562546
    38154 7reo:A (1.812) BS01 CA 3.5.1.11 GO:0016787 ... P07941 35709255
    38155 7rep:A (2.192) BS01 CA 3.5.1.11 GO:0016787 ... P07941 35709255
    38156 7rgf:A (2.4) BS02 CA ? GO:0005509 ... Q91XX0 35253643
    38157 7rgf:A (2.4) BS03 CA ? GO:0005509 ... Q91XX0 35253643
    38158 7rgf:A (2.4) BS04 CA ? GO:0005509 ... Q91XX0 35253643
    38159 7rgf:A (2.4) BS05 CA ? GO:0005509 ... Q91XX0 35253643
    38160 7rgf:A (2.4) BS06 CA ? GO:0005509 ... Q91XX0 35253643
    38161 7rgf:A (2.4) BS07 CA ? GO:0005509 ... Q91XX0 35253643
    38162 7rgf:A (2.4) BS08 CA ? GO:0005509 ... Q91XX0 35253643
    38163 7rgf:A (2.4) BS09 CA ? GO:0005509 ... Q91XX0 35253643
    38164 7rgf:A (2.4) BS10 CA ? GO:0005509 ... Q91XX0 35253643
    38165 7rgf:B (2.4) BS02 CA ? GO:0005509 ... Q91XX0 35253643
    38166 7rgf:B (2.4) BS03 CA ? GO:0005509 ... Q91XX0 35253643
    38167 7rgf:B (2.4) BS04 CA ? GO:0005509 ... Q91XX0 35253643
    38168 7rgf:B (2.4) BS05 CA ? GO:0005509 ... Q91XX0 35253643
    38169 7rgf:B (2.4) BS06 CA ? GO:0005509 ... Q91XX0 35253643
    38170 7rgf:B (2.4) BS07 CA ? GO:0005509 ... Q91XX0 35253643
    38171 7rgf:B (2.4) BS08 CA ? GO:0005509 ... Q91XX0 35253643
    38172 7rgf:B (2.4) BS09 CA ? GO:0005509 ... Q91XX0 35253643
    38173 7rgf:B (2.4) BS10 CA ? GO:0005509 ... Q91XX0 35253643
    38174 7rgj:B (1.44) BS02 CA 1.5.1.3 GO:0004146 ... P00382 35562546
    38175 7rhq:C (3.53) BS02 CA 3.1.-.- GO:0007267 ... Q15465 35231446
    38176 7rhq:C (3.53) BS03 CA 3.1.-.- GO:0007267 ... Q15465 35231446
    38177 7ri3:A (2.69) BS01 CA ? GO:0005615 ... A0A2A2D7J4 35440624
    38178 7ri3:B (2.69) BS01 CA ? GO:0005615 ... A0A2A2D7J4 35440624
    38179 7ri3:C (2.69) BS01 CA ? GO:0005615 ... A0A2A2D7J4 35440624
    38180 7ri3:D (2.69) BS01 CA ? GO:0005615 ... A0A2A2D7J4 35440624
    38181 7ris:A (1.72) BS02 CA 3.1.1.17 GO:0004341 ... Q6N3R9 36502920
    38182 7riz:A (1.71) BS02 CA 3.1.1.17 GO:0004341 ... Q6N3R9 36502920
    38183 7rj9:A (1.7) BS01 CA ? N/A P04004 N/A
    38184 7rj9:B (1.7) BS01 CA ? N/A P04004 N/A
    38185 7rkr:A (1.76) BS03 CA ? GO:0004497 ... A0A2H4A2U9 38085955
    38186 7rkr:A (1.76) BS04 CA ? GO:0004497 ... A0A2H4A2U9 38085955
    38187 7ron:A (1.68) BS01 CA ? GO:0046872 ... A0A1Y0K711 35212625
    38188 7ron:A (1.68) BS02 CA ? GO:0046872 ... A0A1Y0K711 35212625
    38189 7ron:A (1.68) BS03 CA ? GO:0046872 ... A0A1Y0K711 35212625
    38190 7ron:A (1.68) BS04 CA ? GO:0046872 ... A0A1Y0K711 35212625
    38191 7ron:A (1.68) BS05 CA ? GO:0046872 ... A0A1Y0K711 35212625
    38192 7ron:A (1.68) BS06 CA ? GO:0046872 ... A0A1Y0K711 35212625
    38193 7ron:A (1.68) BS07 CA ? GO:0046872 ... A0A1Y0K711 35212625
    38194 7ron:A (1.68) BS08 CA ? GO:0046872 ... A0A1Y0K711 35212625
    38195 7ron:A (1.68) BS09 CA ? GO:0046872 ... A0A1Y0K711 35212625
    38196 7ron:A (1.68) BS10 CA ? GO:0046872 ... A0A1Y0K711 35212625
    38197 7ron:A (1.68) BS11 CA ? GO:0046872 ... A0A1Y0K711 35212625
    38198 7roo:A (1.52) BS03 CA ? GO:0046872 ... A0A1Y0K711 35212625
    38199 7roo:A (1.52) BS04 CA ? GO:0046872 ... A0A1Y0K711 35212625
    38200 7roo:A (1.52) BS05 CA ? GO:0046872 ... A0A1Y0K711 35212625
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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