Home Research COVID-19 Services Publications People Teaching Job Opening News Forum Lab Only
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 44457 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    37601 7pi3:M (3.269) BS02 CA N/A N/A N/A 35177602
    37602 7pi3:T (3.269) BS01 CA N/A N/A N/A 35177602
    37603 7pi3:T (3.269) BS02 CA N/A N/A N/A 35177602
    37604 7pi3:a (3.269) BS01 CA N/A N/A N/A 35177602
    37605 7pi3:a (3.269) BS02 CA N/A N/A N/A 35177602
    37606 7pi4:AAA (2.24) BS02 CA ? N/A P40337 34416073
    37607 7piu:R (2.58) BS02 CA ? GO:0002024 ... P32245 34561620
    37608 7piv:R (2.86) BS02 CA ? GO:0002024 ... P32245 34561620
    37609 7pj3:AAA (1.43) BS01 CA 3.2.1.96 GO:0004040 ... P59206 37418323
    37610 7pj4:AAA (1.25) BS01 CA 3.2.1.96 GO:0004040 ... P59206 37418323
    37611 7pj5:AAA (1.55) BS01 CA 3.2.1.96 GO:0004040 ... P59206 37418323
    37612 7pj6:AAA (1.3) BS03 CA 3.2.1.96 GO:0004040 ... P59206 37418323
    37613 7pjd:A (1.99) BS01 CA ? GO:0005509 ... Q6URH4 34866602
    37614 7pjd:A (1.99) BS02 CA ? GO:0005509 ... Q6URH4 34866602
    37615 7pjd:A (1.99) BS03 CA ? GO:0005509 ... Q6URH4 34866602
    37616 7pjd:B (1.99) BS01 CA ? GO:0005509 ... Q6URH4 34866602
    37617 7pjd:B (1.99) BS02 CA ? GO:0005509 ... Q6URH4 34866602
    37618 7pjd:B (1.99) BS03 CA ? GO:0005509 ... Q6URH4 34866602
    37619 7pjd:C (1.99) BS01 CA ? GO:0005509 ... Q6URH4 34866602
    37620 7pjd:C (1.99) BS02 CA ? GO:0005509 ... Q6URH4 34866602
    37621 7pjd:C (1.99) BS03 CA ? GO:0005509 ... Q6URH4 34866602
    37622 7pjd:D (1.99) BS01 CA ? GO:0005509 ... Q6URH4 34866602
    37623 7pjd:D (1.99) BS02 CA ? GO:0005509 ... Q6URH4 34866602
    37624 7pjd:D (1.99) BS03 CA ? GO:0005509 ... Q6URH4 34866602
    37625 7pjd:E (1.99) BS01 CA ? GO:0005509 ... Q6URH4 34866602
    37626 7pjd:E (1.99) BS02 CA ? GO:0005509 ... Q6URH4 34866602
    37627 7pjd:E (1.99) BS03 CA ? GO:0005509 ... Q6URH4 34866602
    37628 7pjd:F (1.99) BS01 CA ? GO:0005509 ... Q6URH4 34866602
    37629 7pjd:F (1.99) BS02 CA ? GO:0005509 ... Q6URH4 34866602
    37630 7pjd:F (1.99) BS03 CA ? GO:0005509 ... Q6URH4 34866602
    37631 7pjm:A (2.1) BS03 CA 1.1.1.42 GO:0000287 ... O75874 35970853
    37632 7pjm:B (2.1) BS02 CA 1.1.1.42 GO:0000287 ... O75874 35970853
    37633 7pjm:C (2.1) BS01 CA 1.1.1.42 GO:0000287 ... O75874 35970853
    37634 7pk9:A (2.8) BS01 CA ? GO:0001849 ... P02741 34975846
    37635 7pk9:A (2.8) BS02 CA ? GO:0001849 ... P02741 34975846
    37636 7pk9:B (2.8) BS01 CA ? GO:0001849 ... P02741 34975846
    37637 7pk9:B (2.8) BS02 CA ? GO:0001849 ... P02741 34975846
    37638 7pk9:C (2.8) BS01 CA ? GO:0001849 ... P02741 34975846
    37639 7pk9:C (2.8) BS02 CA ? GO:0001849 ... P02741 34975846
    37640 7pk9:D (2.8) BS01 CA ? GO:0001849 ... P02741 34975846
    37641 7pk9:D (2.8) BS02 CA ? GO:0001849 ... P02741 34975846
    37642 7pk9:E (2.8) BS01 CA ? GO:0001849 ... P02741 34975846
    37643 7pk9:E (2.8) BS02 CA ? GO:0001849 ... P02741 34975846
    37644 7pk9:F (2.8) BS01 CA ? GO:0001849 ... P02741 34975846
    37645 7pk9:F (2.8) BS02 CA ? GO:0001849 ... P02741 34975846
    37646 7pk9:G (2.8) BS01 CA ? GO:0001849 ... P02741 34975846
    37647 7pk9:G (2.8) BS02 CA ? GO:0001849 ... P02741 34975846
    37648 7pk9:H (2.8) BS01 CA ? GO:0001849 ... P02741 34975846
    37649 7pk9:H (2.8) BS02 CA ? GO:0001849 ... P02741 34975846
    37650 7pk9:I (2.8) BS01 CA ? GO:0001849 ... P02741 34975846
    37651 7pk9:I (2.8) BS02 CA ? GO:0001849 ... P02741 34975846
    37652 7pk9:J (2.8) BS01 CA ? GO:0001849 ... P02741 34975846
    37653 7pk9:J (2.8) BS02 CA ? GO:0001849 ... P02741 34975846
    37654 7pkb:A (3.2) BS01 CA ? GO:0001849 ... P02741 34975846
    37655 7pkb:A (3.2) BS02 CA ? GO:0001849 ... P02741 34975846
    37656 7pkb:B (3.2) BS01 CA ? GO:0001849 ... P02741 34975846
    37657 7pkb:B (3.2) BS02 CA ? GO:0001849 ... P02741 34975846
    37658 7pkb:C (3.2) BS01 CA ? GO:0001849 ... P02741 34975846
    37659 7pkb:C (3.2) BS02 CA ? GO:0001849 ... P02741 34975846
    37660 7pkb:D (3.2) BS01 CA ? GO:0001849 ... P02741 34975846
    37661 7pkb:D (3.2) BS02 CA ? GO:0001849 ... P02741 34975846
    37662 7pkb:E (3.2) BS01 CA ? GO:0001849 ... P02741 34975846
    37663 7pkb:E (3.2) BS02 CA ? GO:0001849 ... P02741 34975846
    37664 7pkd:A (3.3) BS01 CA ? GO:0001849 ... P02741 34975846
    37665 7pkd:A (3.3) BS02 CA ? GO:0001849 ... P02741 34975846
    37666 7pkd:B (3.3) BS01 CA ? GO:0001849 ... P02741 34975846
    37667 7pkd:B (3.3) BS02 CA ? GO:0001849 ... P02741 34975846
    37668 7pkd:C (3.3) BS01 CA ? GO:0001849 ... P02741 34975846
    37669 7pkd:C (3.3) BS02 CA ? GO:0001849 ... P02741 34975846
    37670 7pkd:D (3.3) BS01 CA ? GO:0001849 ... P02741 34975846
    37671 7pkd:D (3.3) BS02 CA ? GO:0001849 ... P02741 34975846
    37672 7pkd:E (3.3) BS01 CA ? GO:0001849 ... P02741 34975846
    37673 7pkd:E (3.3) BS02 CA ? GO:0001849 ... P02741 34975846
    37674 7pkd:F (3.3) BS01 CA ? GO:0001849 ... P02741 34975846
    37675 7pkd:F (3.3) BS02 CA ? GO:0001849 ... P02741 34975846
    37676 7pkd:G (3.3) BS01 CA ? GO:0001849 ... P02741 34975846
    37677 7pkd:G (3.3) BS02 CA ? GO:0001849 ... P02741 34975846
    37678 7pkd:H (3.3) BS01 CA ? GO:0001849 ... P02741 34975846
    37679 7pkd:H (3.3) BS02 CA ? GO:0001849 ... P02741 34975846
    37680 7pkd:I (3.3) BS01 CA ? GO:0001849 ... P02741 34975846
    37681 7pkd:I (3.3) BS02 CA ? GO:0001849 ... P02741 34975846
    37682 7pkd:J (3.3) BS01 CA ? GO:0001849 ... P02741 34975846
    37683 7pkd:J (3.3) BS02 CA ? GO:0001849 ... P02741 34975846
    37684 7pke:A (3.3) BS01 CA ? GO:0001849 ... P02741 34975846
    37685 7pke:A (3.3) BS02 CA ? GO:0001849 ... P02741 34975846
    37686 7pke:B (3.3) BS01 CA ? GO:0001849 ... P02741 34975846
    37687 7pke:B (3.3) BS02 CA ? GO:0001849 ... P02741 34975846
    37688 7pke:C (3.3) BS01 CA ? GO:0001849 ... P02741 34975846
    37689 7pke:C (3.3) BS02 CA ? GO:0001849 ... P02741 34975846
    37690 7pke:D (3.3) BS01 CA ? GO:0001849 ... P02741 34975846
    37691 7pke:D (3.3) BS02 CA ? GO:0001849 ... P02741 34975846
    37692 7pke:E (3.3) BS01 CA ? GO:0001849 ... P02741 34975846
    37693 7pke:E (3.3) BS02 CA ? GO:0001849 ... P02741 34975846
    37694 7pkf:A (2.8) BS01 CA ? GO:0001849 ... P02741 34975846
    37695 7pkf:A (2.8) BS02 CA ? GO:0001849 ... P02741 34975846
    37696 7pkf:B (2.8) BS01 CA ? GO:0001849 ... P02741 34975846
    37697 7pkf:B (2.8) BS02 CA ? GO:0001849 ... P02741 34975846
    37698 7pkf:C (2.8) BS01 CA ? GO:0001849 ... P02741 34975846
    37699 7pkf:C (2.8) BS02 CA ? GO:0001849 ... P02741 34975846
    37700 7pkf:D (2.8) BS01 CA ? GO:0001849 ... P02741 34975846
    37701 7pkf:D (2.8) BS02 CA ? GO:0001849 ... P02741 34975846
    37702 7pkf:E (2.8) BS01 CA ? GO:0001849 ... P02741 34975846
    37703 7pkf:E (2.8) BS02 CA ? GO:0001849 ... P02741 34975846
    37704 7pkf:F (2.8) BS01 CA ? GO:0001849 ... P02741 34975846
    37705 7pkf:F (2.8) BS02 CA ? GO:0001849 ... P02741 34975846
    37706 7pkf:G (2.8) BS01 CA ? GO:0001849 ... P02741 34975846
    37707 7pkf:G (2.8) BS02 CA ? GO:0001849 ... P02741 34975846
    37708 7pkf:H (2.8) BS01 CA ? GO:0001849 ... P02741 34975846
    37709 7pkf:H (2.8) BS02 CA ? GO:0001849 ... P02741 34975846
    37710 7pkf:I (2.8) BS01 CA ? GO:0001849 ... P02741 34975846
    37711 7pkf:I (2.8) BS02 CA ? GO:0001849 ... P02741 34975846
    37712 7pkf:J (2.8) BS01 CA ? GO:0001849 ... P02741 34975846
    37713 7pkf:J (2.8) BS02 CA ? GO:0001849 ... P02741 34975846
    37714 7pkg:A (3.3) BS01 CA ? GO:0001849 ... P02741 34975846
    37715 7pkg:A (3.3) BS02 CA ? GO:0001849 ... P02741 34975846
    37716 7pkg:B (3.3) BS01 CA ? GO:0001849 ... P02741 34975846
    37717 7pkg:B (3.3) BS02 CA ? GO:0001849 ... P02741 34975846
    37718 7pkg:C (3.3) BS01 CA ? GO:0001849 ... P02741 34975846
    37719 7pkg:C (3.3) BS02 CA ? GO:0001849 ... P02741 34975846
    37720 7pkg:D (3.3) BS01 CA ? GO:0001849 ... P02741 34975846
    37721 7pkg:D (3.3) BS02 CA ? GO:0001849 ... P02741 34975846
    37722 7pkg:E (3.3) BS01 CA ? GO:0001849 ... P02741 34975846
    37723 7pkg:E (3.3) BS02 CA ? GO:0001849 ... P02741 34975846
    37724 7pkh:A (3.0) BS01 CA ? GO:0001849 ... P02741 34975846
    37725 7pkh:A (3.0) BS02 CA ? GO:0001849 ... P02741 34975846
    37726 7pkh:B (3.0) BS01 CA ? GO:0001849 ... P02741 34975846
    37727 7pkh:B (3.0) BS02 CA ? GO:0001849 ... P02741 34975846
    37728 7pkh:C (3.0) BS01 CA ? GO:0001849 ... P02741 34975846
    37729 7pkh:C (3.0) BS02 CA ? GO:0001849 ... P02741 34975846
    37730 7pkh:D (3.0) BS01 CA ? GO:0001849 ... P02741 34975846
    37731 7pkh:D (3.0) BS02 CA ? GO:0001849 ... P02741 34975846
    37732 7pkh:E (3.0) BS01 CA ? GO:0001849 ... P02741 34975846
    37733 7pkh:E (3.0) BS02 CA ? GO:0001849 ... P02741 34975846
    37734 7pkh:F (3.0) BS01 CA ? GO:0001849 ... P02741 34975846
    37735 7pkh:F (3.0) BS02 CA ? GO:0001849 ... P02741 34975846
    37736 7pkh:G (3.0) BS01 CA ? GO:0001849 ... P02741 34975846
    37737 7pkh:G (3.0) BS02 CA ? GO:0001849 ... P02741 34975846
    37738 7pkh:H (3.0) BS01 CA ? GO:0001849 ... P02741 34975846
    37739 7pkh:H (3.0) BS02 CA ? GO:0001849 ... P02741 34975846
    37740 7pkh:I (3.0) BS01 CA ? GO:0001849 ... P02741 34975846
    37741 7pkh:I (3.0) BS02 CA ? GO:0001849 ... P02741 34975846
    37742 7pkh:J (3.0) BS01 CA ? GO:0001849 ... P02741 34975846
    37743 7pkh:J (3.0) BS02 CA ? GO:0001849 ... P02741 34975846
    37744 7pl3:A (1.8) BS01 CA 3.2.1.96 GO:0004040 ... P59205 37418323
    37745 7plm:A (2.9) BS05 CA 1.2.7.1 GO:0003824 ... P94692 35327633
    37746 7plm:B (2.9) BS05 CA 1.2.7.1 GO:0003824 ... P94692 35327633
    37747 7plp:A (1.4) BS01 CA ? N/A Q6N022 35099835
    37748 7plp:A (1.4) BS02 CA ? N/A Q6N022 35099835
    37749 7plp:A (1.4) BS03 CA ? N/A Q6N022 35099835
    37750 7plp:B (1.4) BS01 CA ? N/A Q6N022 35099835
    37751 7plp:B (1.4) BS02 CA ? N/A Q6N022 35099835
    37752 7plp:B (1.4) BS03 CA ? N/A Q6N022 35099835
    37753 7pmo:D (2.1) BS03 CA ? GO:0005975 ... A7B6A6 34936658
    37754 7pmo:G (2.1) BS02 CA ? GO:0005975 ... A7B6A6 34936658
    37755 7pmv:A (3.7) BS01 CA ? N/A P04275 35377815
    37756 7pmv:A (3.7) BS02 CA ? N/A P04275 35377815
    37757 7pmv:A (3.7) BS03 CA ? N/A P04275 35377815
    37758 7pmv:B (3.7) BS01 CA ? N/A P04275 35377815
    37759 7pmv:B (3.7) BS02 CA ? N/A P04275 35377815
    37760 7pmv:B (3.7) BS03 CA ? N/A P04275 35377815
    37761 7pmv:D (3.7) BS01 CA ? N/A P04275 35377815
    37762 7pmv:D (3.7) BS02 CA ? N/A P04275 35377815
    37763 7pmv:D (3.7) BS03 CA ? N/A P04275 35377815
    37764 7pmv:E (3.7) BS01 CA ? N/A P04275 35377815
    37765 7pmv:E (3.7) BS02 CA ? N/A P04275 35377815
    37766 7pmv:E (3.7) BS03 CA ? N/A P04275 35377815
    37767 7pnf:B (4.35) BS01 CA ? N/A P04275 35377815
    37768 7pnf:B (4.35) BS02 CA ? N/A P04275 35377815
    37769 7pnf:B (4.35) BS03 CA ? N/A P04275 35377815
    37770 7pnf:D (4.35) BS01 CA ? N/A P04275 35377815
    37771 7pnf:D (4.35) BS02 CA ? N/A P04275 35377815
    37772 7pnf:D (4.35) BS03 CA ? N/A P04275 35377815
    37773 7po7:H (2.31) BS01 CA 3.1.3.21
    3.1.3.48    		 GO:0000121 ... Q8CHP8 36369173
    37774 7pod:A (1.5) BS03 CA 3.2.1.96 GO:0004040 ... P59206 37418323
    37775 7pov:A (3.8) BS01 CA ? N/A Q02817 35377815
    37776 7pov:A (3.8) BS02 CA ? N/A Q02817 35377815
    37777 7pov:B (3.8) BS01 CA ? N/A Q02817 35377815
    37778 7pov:B (3.8) BS02 CA ? N/A Q02817 35377815
    37779 7pov:C (3.8) BS01 CA ? N/A Q02817 35377815
    37780 7pov:D (3.8) BS01 CA ? N/A Q02817 35377815
    37781 7pow:A (2.51) BS02 CA 2.7.8.8 GO:0003882 ... Q58609 N/A
    37782 7pow:B (2.51) BS02 CA 2.7.8.8 GO:0003882 ... Q58609 N/A
    37783 7pp6:A (3.4) BS01 CA ? N/A Q02817 35377815
    37784 7pp6:A (3.4) BS02 CA ? N/A Q02817 35377815
    37785 7pp6:B (3.4) BS01 CA ? N/A Q02817 35377815
    37786 7pp6:B (3.4) BS02 CA ? N/A Q02817 35377815
    37787 7pp6:B (3.4) BS03 CA ? N/A Q02817 35377815
    37788 7pp6:C (3.4) BS01 CA ? N/A Q02817 35377815
    37789 7pp6:D (3.4) BS01 CA ? N/A Q02817 35377815
    37790 7pp6:D (3.4) BS02 CA ? N/A Q02817 35377815
    37791 7pp6:D (3.4) BS03 CA ? N/A Q02817 35377815
    37792 7pp6:E (3.4) BS01 CA ? N/A Q02817 35377815
    37793 7pp6:E (3.4) BS02 CA ? N/A Q02817 35377815
    37794 7pp6:G (3.4) BS01 CA ? N/A Q02817 35377815
    37795 7ppo:B (2.91) BS01 CA ? GO:0000086 ... P0DP24 34702826
    37796 7pq9:AAA (2.8) BS01 CA N/A GO:0003700 ... N/A 37378428
    37797 7pq9:AAA (2.8) BS02 CA N/A GO:0003700 ... N/A 37378428
    37798 7pq9:BBB (2.8) BS01 CA N/A GO:0003700 ... N/A 37378428
    37799 7pq9:BBB (2.8) BS02 CA N/A GO:0003700 ... N/A 37378428
    37800 7pq9:CCC (2.8) BS01 CA N/A GO:0003700 ... N/A 37378428
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218