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BioLiP
Download all results in tab-seperated text for 44457 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    35801 7cji:c (2.35) BS15 CA ? GO:0005737 ... D0VWR7 33953929
    35802 7cji:c (2.35) BS16 CA ? GO:0005737 ... D0VWR7 33953929
    35803 7cji:o (2.35) BS01 CA ? GO:0009523 ... D0VWR2 33953929
    35804 7cjj:C (2.4) BS15 CA ? GO:0005737 ... D0VWR7 33953929
    35805 7cjj:O (2.4) BS01 CA ? GO:0009523 ... D0VWR2 33953929
    35806 7cjj:c (2.4) BS15 CA ? GO:0005737 ... D0VWR7 33953929
    35807 7cjj:c (2.4) BS16 CA ? GO:0005737 ... D0VWR7 33953929
    35808 7cjj:o (2.4) BS01 CA ? GO:0009523 ... D0VWR2 33953929
    35809 7cld:A (2.611) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 34138737
    35810 7cld:C (2.611) BS03 CA 3.6.5.- GO:0000226 ... Q2XVP4 34138737
    35811 7cld:C (2.611) BS05 CA 3.6.5.- GO:0000226 ... Q2XVP4 34138737
    35812 7clt:A (2.07381) BS01 CA ? GO:0005509 ... Q9D4J1 33537316
    35813 7clt:A (2.07381) BS02 CA ? GO:0005509 ... Q9D4J1 33537316
    35814 7cm1:A (2.14) BS01 CA 3.2.1.18 GO:0004308 ... A0A2P1GNT2 33135677
    35815 7cm1:B (2.14) BS01 CA 3.2.1.18 GO:0004308 ... A0A2P1GNT2 33135677
    35816 7cme:A (2.45) BS03 CA ? GO:0005509 ... P22223 N/A
    35817 7cme:A (2.45) BS04 CA ? GO:0005509 ... P22223 N/A
    35818 7cme:B (2.45) BS02 CA ? GO:0005509 ... P22223 N/A
    35819 7cme:B (2.45) BS03 CA ? GO:0005509 ... P22223 N/A
    35820 7cmf:A (2.3) BS01 CA ? GO:0005509 ... P22223 N/A
    35821 7cmf:A (2.3) BS02 CA ? GO:0005509 ... P22223 N/A
    35822 7cmf:A (2.3) BS03 CA ? GO:0005509 ... P22223 N/A
    35823 7cn6:B (1.6) BS01 CA ? GO:0044229 ... P39230 32987925
    35824 7cn6:C (1.6) BS01 CA ? GO:0044229 ... P39230 32987925
    35825 7cnm:A (2.44) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 33220079
    35826 7cnm:C (2.44) BS03 CA 3.6.5.- GO:0000226 ... Q2XVP4 33220079
    35827 7cnn:A (2.5) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 33220079
    35828 7cnn:C (2.5) BS03 CA 3.6.5.- GO:0000226 ... Q2XVP4 33220079
    35829 7cno:A (2.5) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 33220079
    35830 7cno:C (2.5) BS03 CA 3.6.5.- GO:0000226 ... Q2XVP4 33220079
    35831 7cof:A (1.084) BS01 CA ? GO:0016787 ... A0A1Y1BQV9 N/A
    35832 7cog:A (2.098) BS01 CA ? GO:0016787 ... A0A1Y1BQV9 N/A
    35833 7cog:B (2.098) BS01 CA ? GO:0016787 ... A0A1Y1BQV9 N/A
    35834 7cog:C (2.098) BS01 CA ? GO:0016787 ... A0A1Y1BQV9 N/A
    35835 7cog:D (2.098) BS01 CA ? GO:0016787 ... A0A1Y1BQV9 N/A
    35836 7cou:C (2.25) BS15 CA ? GO:0005737 ... D0VWR7 33953929
    35837 7cou:O (2.25) BS01 CA ? GO:0009523 ... D0VWR2 33953929
    35838 7cou:c (2.25) BS15 CA ? GO:0005737 ... D0VWR7 33953929
    35839 7cou:c (2.25) BS16 CA ? GO:0005737 ... D0VWR7 33953929
    35840 7cou:o (2.25) BS01 CA ? GO:0009523 ... D0VWR2 33953929
    35841 7cpd:A (2.506) BS02 CA 3.6.5.- GO:0000226 ... P81947 N/A
    35842 7cpd:B (2.506) BS02 CA ? GO:0000226 ... Q6B856 N/A
    35843 7cpk:A (1.6) BS01 CA 3.2.1.8 GO:0004553 ... P07528 33604642
    35844 7cpk:A (1.6) BS02 CA 3.2.1.8 GO:0004553 ... P07528 33604642
    35845 7cpk:A (1.6) BS03 CA 3.2.1.8 GO:0004553 ... P07528 33604642
    35846 7cpl:A (1.52) BS01 CA 3.2.1.8 GO:0004553 ... P07528 33604642
    35847 7cpl:A (1.52) BS02 CA 3.2.1.8 GO:0004553 ... P07528 33604642
    35848 7cpl:A (1.52) BS03 CA 3.2.1.8 GO:0004553 ... P07528 33604642
    35849 7cpq:A (2.595) BS02 CA 3.6.5.- GO:0000226 ... P81947 N/A
    35850 7cpq:B (2.595) BS03 CA ? GO:0000226 ... Q6B856 N/A
    35851 7cqh:B (2.15) BS02 CA ? GO:0005509 ... P62152 33326749
    35852 7cqh:B (2.15) BS03 CA ? GO:0005509 ... P62152 33326749
    35853 7cqp:B (1.9) BS02 CA ? GO:0005509 ... P0DP26 33326749
    35854 7cqp:B (1.9) BS03 CA ? GO:0005509 ... P0DP26 33326749
    35855 7cqv:A (1.78) BS01 CA ? GO:0005509 ... C6SUZ2 33326749
    35856 7cqv:A (1.78) BS02 CA ? GO:0005509 ... C6SUZ2 33326749
    35857 7cqv:E (1.78) BS01 CA ? GO:0005509 ... C6SUZ2 33326749
    35858 7cqv:E (1.78) BS02 CA ? GO:0005509 ... C6SUZ2 33326749
    35859 7cs0:A (2.05) BS03 CA 2.3.1.- GO:0016746 ... P94968 33299080
    35860 7cs0:B (2.05) BS03 CA 2.3.1.- GO:0016746 ... P94968 33299080
    35861 7cts:A (1.1) BS01 CA 3.1.1.74 N/A W0TJ64 33340163
    35862 7cym:A (2.7) BS01 CA ? GO:0005509 ... Q12864 34364873
    35863 7cym:A (2.7) BS02 CA ? GO:0005509 ... Q12864 34364873
    35864 7cym:A (2.7) BS03 CA ? GO:0005509 ... Q12864 34364873
    35865 7cym:A (2.7) BS04 CA ? GO:0005509 ... Q12864 34364873
    35866 7cym:A (2.7) BS05 CA ? GO:0005509 ... Q12864 34364873
    35867 7cym:A (2.7) BS06 CA ? GO:0005509 ... Q12864 34364873
    35868 7cym:B (2.7) BS01 CA ? GO:0005509 ... Q12864 34364873
    35869 7cym:B (2.7) BS02 CA ? GO:0005509 ... Q12864 34364873
    35870 7cym:B (2.7) BS03 CA ? GO:0005509 ... Q12864 34364873
    35871 7cym:B (2.7) BS04 CA ? GO:0005509 ... Q12864 34364873
    35872 7cym:B (2.7) BS05 CA ? GO:0005509 ... Q12864 34364873
    35873 7cym:B (2.7) BS06 CA ? GO:0005509 ... Q12864 34364873
    35874 7cz2:A (1.8) BS02 CA ? GO:0000166 ... A0QTT2 34956144
    35875 7czh:A (2.104) BS01 CA ? GO:0046872 ... A0A0J8GWN9 33771786
    35876 7czh:A (2.104) BS02 CA ? GO:0046872 ... A0A0J8GWN9 33771786
    35877 7czh:A (2.104) BS03 CA ? GO:0046872 ... A0A0J8GWN9 33771786
    35878 7czh:B (2.104) BS01 CA ? GO:0046872 ... A0A0J8GWN9 33771786
    35879 7czh:B (2.104) BS02 CA ? GO:0046872 ... A0A0J8GWN9 33771786
    35880 7czh:B (2.104) BS03 CA ? GO:0046872 ... A0A0J8GWN9 33771786
    35881 7czh:B (2.104) BS04 CA ? GO:0046872 ... A0A0J8GWN9 33771786
    35882 7d0v:A (2.175) BS04 CA 3.1.3.5 GO:0000166 ... A0A2I4HXH5 N/A
    35883 7d0v:B (2.175) BS03 CA 3.1.3.5 GO:0000166 ... A0A2I4HXH5 N/A
    35884 7d29:A (1.7) BS01 CA ? N/A A0A3B6UEP6 33010888
    35885 7d2a:A (1.57) BS02 CA ? N/A A0A3B6UEP6 33010888
    35886 7d3f:A (2.6) BS10 CA 1.11.1.-
    1.6.3.1    		 GO:0004601 ... Q9NRD9 33420071
    35887 7d3f:A (2.6) BS11 CA 1.11.1.-
    1.6.3.1    		 GO:0004601 ... Q9NRD9 33420071
    35888 7d3f:C (2.6) BS10 CA 1.11.1.-
    1.6.3.1    		 GO:0004601 ... Q9NRD9 33420071
    35889 7d3f:C (2.6) BS11 CA 1.11.1.-
    1.6.3.1    		 GO:0004601 ... Q9NRD9 33420071
    35890 7d47:B (1.97) BS01 CA 2.1.1.56
    2.1.1.57
    2.7.7.48
    2.7.7.50
    3.1.13.-
    3.4.19.12
    3.4.22.-
    3.4.22.69
    3.6.4.12
    3.6.4.13
    4.6.1.-    		 GO:0006508 ... P0DTD1 N/A
    35891 7d4p:A (2.7) BS04 CA ? GO:0005216 ... Q9UL62 33683200
    35892 7d4p:B (2.7) BS04 CA ? GO:0005216 ... Q9UL62 33683200
    35893 7d4p:C (2.7) BS04 CA ? GO:0005216 ... Q9UL62 33683200
    35894 7d4p:D (2.7) BS05 CA ? GO:0005216 ... Q9UL62 33683200
    35895 7d4q:A (2.74) BS03 CA ? GO:0005216 ... Q9UL62 33683200
    35896 7d4q:B (2.74) BS03 CA ? GO:0005216 ... Q9UL62 33683200
    35897 7d4q:C (2.74) BS03 CA ? GO:0005216 ... Q9UL62 33683200
    35898 7d4q:D (2.74) BS04 CA ? GO:0005216 ... Q9UL62 33683200
    35899 7d52:A (2.2) BS01 CA 1.11.1.7 GO:0004601 ... L8ICE9 33427997
    35900 7d56:A (3.175) BS02 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35901 7d56:A (3.175) BS03 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35902 7d56:A (3.175) BS04 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35903 7d56:A (3.175) BS05 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35904 7d56:A (3.175) BS06 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35905 7d56:B (3.175) BS02 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35906 7d56:B (3.175) BS03 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35907 7d56:B (3.175) BS04 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35908 7d56:B (3.175) BS05 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35909 7d56:B (3.175) BS06 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35910 7d56:C (3.175) BS02 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35911 7d56:C (3.175) BS03 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35912 7d56:C (3.175) BS04 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35913 7d56:C (3.175) BS05 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35914 7d56:C (3.175) BS06 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35915 7d5r:A (3.148) BS01 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35916 7d5r:A (3.148) BS02 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35917 7d5r:A (3.148) BS03 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35918 7d5r:A (3.148) BS04 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35919 7d5r:A (3.148) BS05 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35920 7d5r:B (3.148) BS01 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35921 7d5r:B (3.148) BS02 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35922 7d5r:B (3.148) BS03 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35923 7d5r:B (3.148) BS04 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35924 7d5r:B (3.148) BS05 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35925 7d7e:B (3.4) BS01 CA ? GO:0005509 ... A2A259 34381056
    35926 7d7e:C (3.4) BS01 CA ? GO:0005509 ... A2A259 34381056
    35927 7d7e:D (3.4) BS01 CA ? GO:0005509 ... A2A259 34381056
    35928 7d7f:B (3.1) BS01 CA ? GO:0005509 ... A2A259 34381056
    35929 7d7f:C (3.1) BS01 CA ? GO:0005509 ... A2A259 34381056
    35930 7d7f:D (3.1) BS01 CA ? GO:0005509 ... A2A259 34381056
    35931 7d87:A (2.11) BS07 CA ? N/A A0A286Y9D1 34365506
    35932 7d87:A (2.11) BS08 CA ? N/A A0A286Y9D1 34365506
    35933 7d88:A (2.34482) BS01 CA 3.2.1.8 GO:0004553 ... A0A4P8ESF9 34156819
    35934 7d88:A (2.34482) BS02 CA 3.2.1.8 GO:0004553 ... A0A4P8ESF9 34156819
    35935 7d89:A (2.89384) BS01 CA 3.2.1.8 GO:0004553 ... A0A4P8ESF9 34156819
    35936 7d89:A (2.89384) BS02 CA 3.2.1.8 GO:0004553 ... A0A4P8ESF9 34156819
    35937 7d8a:A (2.0) BS07 CA ? N/A A0A286Y9D1 34365506
    35938 7d8a:A (2.0) BS08 CA ? N/A A0A286Y9D1 34365506
    35939 7d8i:A (1.62) BS02 CA 3.6.1.15
    3.6.1.6    		 GO:0000287 ... Q7A4T2 33955674
    35940 7d8i:A (1.62) BS03 CA 3.6.1.15
    3.6.1.6    		 GO:0000287 ... Q7A4T2 33955674
    35941 7d8n:A (2.753) BS01 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35942 7d8n:A (2.753) BS02 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35943 7d8n:A (2.753) BS03 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35944 7d8n:A (2.753) BS04 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35945 7d8n:A (2.753) BS05 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35946 7d8n:B (2.753) BS01 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35947 7d8n:B (2.753) BS02 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35948 7d8n:B (2.753) BS03 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35949 7d8n:B (2.753) BS04 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35950 7d8n:B (2.753) BS05 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35951 7d9b:A (1.58) BS01 CA N/A GO:0004553 ... N/A 34342279
    35952 7d9c:A (1.36) BS03 CA 3.2.1.20 GO:0004553 ... N/A 34342279
    35953 7dad:A (2.85) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 33272565
    35954 7dad:C (2.85) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 33272565
    35955 7dae:A (2.394) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 33272565
    35956 7dae:C (2.394) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 33272565
    35957 7daf:A (2.4) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 33272565
    35958 7daf:C (2.4) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 33272565
    35959 7dan:A (3.1) BS01 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35960 7dan:A (3.1) BS02 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35961 7dan:A (3.1) BS03 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35962 7dan:A (3.1) BS04 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35963 7dan:A (3.1) BS05 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35964 7dan:B (3.1) BS01 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35965 7dan:B (3.1) BS02 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35966 7dan:B (3.1) BS03 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35967 7dan:B (3.1) BS04 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35968 7dan:B (3.1) BS05 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35969 7dan:C (3.1) BS01 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35970 7dan:C (3.1) BS02 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35971 7dan:C (3.1) BS03 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35972 7dan:C (3.1) BS04 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35973 7dan:C (3.1) BS05 CA 3.5.3.15 GO:0004668 ... Q9ULW8 33971157
    35974 7dao:A (2.28) BS01 CA 1.11.1.7 GO:0004601 ... L8ICE9 N/A
    35975 7db9:A (2.845) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 N/A
    35976 7db9:C (2.845) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 N/A
    35977 7dba:A (2.461) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 N/A
    35978 7dba:C (2.461) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 N/A
    35979 7dbb:A (2.805) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 N/A
    35980 7dbb:C (2.805) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 N/A
    35981 7dbc:A (2.4) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 N/A
    35982 7dbc:C (2.4) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 N/A
    35983 7dbd:A (3.094) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 N/A
    35984 7dbd:C (3.094) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 N/A
    35985 7dcg:A (1.53) BS04 CA N/A GO:0004553 ... N/A 34342279
    35986 7dch:A (1.692) BS04 CA N/A GO:0004553 ... N/A 34342279
    35987 7dco:C (2.5) BS05 CA ? GO:0003924 ... N/A 33243853
    35988 7dd5:A (3.2) BS01 CA N/A GO:0004930 ... N/A 34088669
    35989 7dd5:B (3.2) BS01 CA N/A GO:0004930 ... N/A 34088669
    35990 7dd5:B (3.2) BS02 CA N/A GO:0004930 ... N/A 34088669
    35991 7dd6:A (3.2) BS01 CA N/A GO:0004930 ... N/A 34088669
    35992 7dd6:B (3.2) BS01 CA N/A GO:0004930 ... N/A 34088669
    35993 7dd7:A (3.2) BS01 CA N/A GO:0004930 ... N/A 34088669
    35994 7dd7:B (3.2) BS01 CA N/A GO:0004930 ... N/A 34088669
    35995 7de5:A (1.55) BS04 CA 1.11.1.7 GO:0004601 ... L8ICE9 33389415
    35996 7deo:A (2.5) BS01 CA N/A N/A N/A 33961621
    35997 7deo:C (2.5) BS01 CA N/A N/A N/A 33961621
    35998 7df2:A (1.7) BS02 CA ? GO:0046872 ... A0A1D1UCW7 33226149
    35999 7df2:A (1.7) BS03 CA ? GO:0046872 ... A0A1D1UCW7 33226149
    36000 7df2:A (1.7) BS04 CA ? GO:0046872 ... A0A1D1UCW7 33226149
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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