Home Research COVID-19 Services Publications People Teaching Job Opening News Forum Lab Only
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 44457 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    35201 6zfe:A (2.35) BS02 CA ? GO:0001533 ... P31725 33359632
    35202 6zfj:A (1.0) BS01 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    35203 6zfk:A (1.1) BS01 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    35204 6zhj:A (3.26) BS02 CA 3.4.24.27 GO:0004222 ... P00800 33404527
    35205 6zhj:A (3.26) BS03 CA 3.4.24.27 GO:0004222 ... P00800 33404527
    35206 6zhj:A (3.26) BS04 CA 3.4.24.27 GO:0004222 ... P00800 33404527
    35207 6zhj:A (3.26) BS05 CA 3.4.24.27 GO:0004222 ... P00800 33404527
    35208 6zk1:A (1.99) BS01 CA ? GO:0006139 ... B6THD4 38044809
    35209 6zk1:B (1.99) BS01 CA ? GO:0006139 ... B6THD4 38044809
    35210 6zk1:C (1.99) BS01 CA ? GO:0006139 ... B6THD4 38044809
    35211 6zk1:D (1.99) BS01 CA ? GO:0006139 ... B6THD4 38044809
    35212 6zk2:A (2.2) BS01 CA ? GO:0006139 ... B6THD4 38044809
    35213 6zk2:B (2.2) BS01 CA ? GO:0006139 ... B6THD4 38044809
    35214 6zk2:C (2.2) BS01 CA ? GO:0006139 ... B6THD4 38044809
    35215 6zk2:D (2.2) BS01 CA ? GO:0006139 ... B6THD4 38044809
    35216 6zk3:A (1.75) BS01 CA ? GO:0006139 ... B6THD4 38044809
    35217 6zk3:B (1.75) BS01 CA ? GO:0006139 ... B6THD4 38044809
    35218 6zk3:C (1.75) BS01 CA ? GO:0006139 ... B6THD4 38044809
    35219 6zk3:D (1.75) BS01 CA ? GO:0006139 ... B6THD4 38044809
    35220 6zk3:E (1.75) BS01 CA ? GO:0006139 ... B6THD4 38044809
    35221 6zk3:F (1.75) BS01 CA ? GO:0006139 ... B6THD4 38044809
    35222 6zk4:A (1.95) BS01 CA ? GO:0006139 ... B6THD4 38044809
    35223 6zk4:B (1.95) BS01 CA ? GO:0006139 ... B6THD4 38044809
    35224 6zk4:C (1.95) BS01 CA ? GO:0006139 ... B6THD4 38044809
    35225 6zk4:D (1.95) BS01 CA ? GO:0006139 ... B6THD4 38044809
    35226 6zk5:A (1.9) BS01 CA 3.2.2.- GO:0006139 ... B6T563 38044809
    35227 6zk5:B (1.9) BS02 CA 3.2.2.- GO:0006139 ... B6T563 38044809
    35228 6zlp:A (2.15) BS03 CA 1.8.1.9 GO:0000166 ... A0A3Q0KFL1 33950676
    35229 6zlz:A (3.52) BS01 CA ? GO:0005198 ... B0G0W3 32699083
    35230 6zlz:B (3.52) BS01 CA ? GO:0005198 ... B0G0W3 32699083
    35231 6zlz:C (3.52) BS01 CA ? GO:0005198 ... B0G0W3 32699083
    35232 6zlz:D (3.52) BS01 CA ? GO:0005198 ... B0G0W3 32699083
    35233 6zlz:E (3.52) BS01 CA ? GO:0005198 ... B0G0W3 32699083
    35234 6zlz:F (3.52) BS01 CA ? GO:0005198 ... B0G0W3 32699083
    35235 6zma:B (2.15) BS03 CA ? GO:0006400 ... A0A179QS89 32785618
    35236 6zmb:B (1.7) BS03 CA ? GO:0006400 ... A0A179QS89 32785618
    35237 6zmc:B (2.5) BS03 CA ? GO:0006400 ... A0A179QS89 32785618
    35238 6zoo:3 (2.74) BS03 CA ? GO:0009765 ... Q32904 34085703
    35239 6zoo:B (2.74) BS45 CA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 34085703
    35240 6zp3:A (1.8) BS03 CA 1.8.1.9 GO:0000166 ... A0A3Q0KFL1 33950676
    35241 6zq2:A (1.29) BS02 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    35242 6zqr:A (1.93) BS01 CA ? N/A Q8N539 N/A
    35243 6zqr:B (1.93) BS01 CA ? N/A Q8N539 N/A
    35244 6zqx:A (1.84) BS01 CA ? N/A Q8N539 N/A
    35245 6zqx:B (1.84) BS01 CA ? N/A Q8N539 N/A
    35246 6zqy:A (1.85) BS01 CA ? N/A Q8N539 N/A
    35247 6zqy:B (1.85) BS01 CA ? N/A Q8N539 N/A
    35248 6zr0:A (1.94) BS01 CA ? N/A Q8N539 N/A
    35249 6zr0:B (1.94) BS02 CA ? N/A Q8N539 N/A
    35250 6zr3:A (1.97) BS01 CA ? N/A Q8N539 N/A
    35251 6zr3:B (1.97) BS01 CA ? N/A Q8N539 N/A
    35252 6zr4:A (2.0) BS01 CA ? N/A Q8N539 N/A
    35253 6zr4:B (2.0) BS01 CA ? N/A Q8N539 N/A
    35254 6zsm:A (1.95) BS01 CA ? GO:0005509 ... K4DIE3
    P42212    		 34845372
    35255 6zsm:A (1.95) BS02 CA ? GO:0005509 ... K4DIE3
    P42212    		 34845372
    35256 6zsm:A (1.95) BS03 CA ? GO:0005509 ... K4DIE3
    P42212    		 34845372
    35257 6zsm:A (1.95) BS04 CA ? GO:0005509 ... K4DIE3
    P42212    		 34845372
    35258 6zsm:A (1.95) BS05 CA ? GO:0005509 ... K4DIE3
    P42212    		 34845372
    35259 6zsn:A (2.6) BS01 CA ? GO:0005509 ... K4DIE3
    P42212    		 34845372
    35260 6zsn:A (2.6) BS02 CA ? GO:0005509 ... K4DIE3
    P42212    		 34845372
    35261 6zsn:A (2.6) BS03 CA ? GO:0005509 ... K4DIE3
    P42212    		 34845372
    35262 6zsn:A (2.6) BS04 CA ? GO:0005509 ... K4DIE3
    P42212    		 34845372
    35263 6ztb:I (1.4) BS01 CA ? GO:0005509 ... P22223 33879555
    35264 6ztb:I (1.4) BS02 CA ? GO:0005509 ... P22223 33879555
    35265 6ztb:I (1.4) BS03 CA ? GO:0005509 ... P22223 33879555
    35266 6ztr:I (2.1) BS01 CA ? GO:0005509 ... P22223 33879555
    35267 6ztr:I (2.1) BS02 CA ? GO:0005509 ... P22223 33879555
    35268 6ztr:I (2.1) BS03 CA ? GO:0005509 ... P22223 33879555
    35269 6ztr:J (2.1) BS01 CA ? GO:0005509 ... P22223 33879555
    35270 6ztr:J (2.1) BS02 CA ? GO:0005509 ... P22223 33879555
    35271 6ztr:J (2.1) BS03 CA ? GO:0005509 ... P22223 33879555
    35272 6zuj:AAA (1.8) BS01 CA 4.3.1.17
    4.3.1.18
    5.1.1.18    		 GO:0000287 ... Q9GZT4 35410329
    35273 6zuj:BBB (1.8) BS01 CA 4.3.1.17
    4.3.1.18
    5.1.1.18    		 GO:0000287 ... Q9GZT4 35410329
    35274 6zuj:CCC (1.8) BS01 CA 4.3.1.17
    4.3.1.18
    5.1.1.18    		 GO:0000287 ... Q9GZT4 35410329
    35275 6zuj:DDD (1.8) BS01 CA 4.3.1.17
    4.3.1.18
    5.1.1.18    		 GO:0000287 ... Q9GZT4 35410329
    35276 6zww:G (3.16) BS02 CA 3.6.4.13 GO:0003676 ... P43329 34290142
    35277 6zxs:3 (3.0) BS06 CA ? GO:0009765 ... Q32904 N/A
    35278 6zxs:B (3.0) BS48 CA 1.97.1.12 GO:0000287 ... A0A0F6NGI2 N/A
    35279 6zyh:A (1.88) BS02 CA 3.6.4.10 GO:0005524 ... G3I8R9 33295873
    35280 6zyh:B (1.88) BS02 CA 3.6.4.10 GO:0005524 ... G3I8R9 33295873
    35281 6zyi:A (1.52) BS02 CA ? GO:0005524 ... P0DMV8 33295873
    35282 6zyj:A (1.85) BS01 CA 3.6.4.10 GO:0005524 ... P11142 33295873
    35283 6zyj:B (1.85) BS02 CA 3.6.4.10 GO:0005524 ... P11142 33295873
    35284 7a0x:F (2.37) BS01 CA N/A N/A N/A N/A
    35285 7a1r:A (1.5) BS01 CA ? GO:0008289 ... Q388M5 33997700
    35286 7a1r:A (1.5) BS02 CA ? GO:0008289 ... Q388M5 33997700
    35287 7a1r:B (1.5) BS01 CA ? GO:0008289 ... Q388M5 33997700
    35288 7a1r:B (1.5) BS02 CA ? GO:0008289 ... Q388M5 33997700
    35289 7a26:CCC (2.98) BS01 CA ? GO:0046872 ... A0A1Q4NVM5 33742033
    35290 7a26:FFF (2.98) BS01 CA ? GO:0046872 ... A0A1Q4NVM5 33742033
    35291 7a26:GGG (2.98) BS01 CA ? GO:0046872 ... A0A1Q4NVM5 33742033
    35292 7a26:HHH (2.98) BS01 CA ? GO:0046872 ... A0A1Q4NVM5 33742033
    35293 7a3n:A (2.1) BS01 CA 2.1.1.56
    2.1.1.57
    2.7.7.48
    3.4.21.91
    3.6.1.15
    3.6.4.13    		 GO:0046983 ... A0A024B7W1 34852239
    35294 7a5o:A (2.95) BS01 CA ? N/A Q02817 33031746
    35295 7a5o:A (2.95) BS02 CA ? N/A Q02817 33031746
    35296 7a5o:A (2.95) BS03 CA ? N/A Q02817 33031746
    35297 7a5o:A (2.95) BS04 CA ? N/A Q02817 33031746
    35298 7a5o:A (2.95) BS05 CA ? N/A Q02817 33031746
    35299 7a5o:B (2.95) BS01 CA ? N/A Q02817 33031746
    35300 7a5o:B (2.95) BS02 CA ? N/A Q02817 33031746
    35301 7a5o:C (2.95) BS01 CA ? N/A Q02817 33031746
    35302 7a5o:C (2.95) BS02 CA ? N/A Q02817 33031746
    35303 7a5o:C (2.95) BS03 CA ? N/A Q02817 33031746
    35304 7a5o:D (2.95) BS01 CA ? N/A Q02817 33031746
    35305 7a5o:D (2.95) BS02 CA ? N/A Q02817 33031746
    35306 7a5o:D (2.95) BS03 CA ? N/A Q02817 33031746
    35307 7a5o:E (2.95) BS01 CA ? N/A Q02817 33031746
    35308 7a5o:E (2.95) BS02 CA ? N/A Q02817 33031746
    35309 7a5o:E (2.95) BS03 CA ? N/A Q02817 33031746
    35310 7a5o:E (2.95) BS04 CA ? N/A Q02817 33031746
    35311 7a5o:E (2.95) BS05 CA ? N/A Q02817 33031746
    35312 7a5o:F (2.95) BS01 CA ? N/A Q02817 33031746
    35313 7a5o:F (2.95) BS02 CA ? N/A Q02817 33031746
    35314 7a5o:G (2.95) BS01 CA ? N/A Q02817 33031746
    35315 7a5o:G (2.95) BS02 CA ? N/A Q02817 33031746
    35316 7a5o:G (2.95) BS03 CA ? N/A Q02817 33031746
    35317 7a5o:H (2.95) BS01 CA ? N/A Q02817 33031746
    35318 7a5o:H (2.95) BS02 CA ? N/A Q02817 33031746
    35319 7a5o:H (2.95) BS03 CA ? N/A Q02817 33031746
    35320 7a5o:I (2.95) BS01 CA ? N/A Q02817 33031746
    35321 7a5o:I (2.95) BS02 CA ? N/A Q02817 33031746
    35322 7a5o:J (2.95) BS01 CA ? N/A Q02817 33031746
    35323 7a5o:J (2.95) BS02 CA ? N/A Q02817 33031746
    35324 7a5x:A (1.94) BS02 CA 3.2.1.18 GO:0004308 ... P62575 33150981
    35325 7a5x:B (1.94) BS02 CA 3.2.1.18 GO:0004308 ... P62575 33150981
    35326 7a73:A (1.14) BS01 CA 5.2.1.8 GO:0000413 ... Q8YM80 N/A
    35327 7abv:A (2.065) BS01 CA ? GO:0007219 ... Q01705 34301900
    35328 7abv:A (2.065) BS02 CA ? GO:0007219 ... Q01705 34301900
    35329 7abv:A (2.065) BS03 CA ? GO:0007219 ... Q01705 34301900
    35330 7agv:A (1.85) BS01 CA ? GO:0005886 ... O07535 33790011
    35331 7agv:G (1.85) BS01 CA ? GO:0005886 ... O07535 33790011
    35332 7ahu:C (2.6) BS02 CA 3.4.21.6 GO:0004252 ... P00742 34077951
    35333 7ahu:E (2.6) BS02 CA 3.4.21.6 GO:0004252 ... P00742 34077951
    35334 7ahv:H (3.11) BS02 CA 3.4.21.22 GO:0004252 ... P00740 34077951
    35335 7aj0:A (2.5) BS01 CA N/A N/A N/A 34593864
    35336 7aj0:B (2.5) BS01 CA N/A N/A N/A 34593864
    35337 7aj0:C (2.5) BS01 CA N/A N/A N/A 34593864
    35338 7aj0:D (2.5) BS01 CA N/A N/A N/A 34593864
    35339 7aj0:E (2.5) BS01 CA N/A N/A N/A 34593864
    35340 7aj0:F (2.5) BS01 CA N/A N/A N/A 34593864
    35341 7akn:A (2.46) BS01 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    35342 7akn:A (2.46) BS02 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    35343 7akn:A (2.46) BS03 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    35344 7akn:A (2.46) BS04 CA 3.4.24.27 GO:0004222 ... P00800 N/A
    35345 7al8:E (2.85) BS01 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    35346 7al8:H (2.85) BS01 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    35347 7al8:Q (2.85) BS01 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    35348 7al8:T (2.85) BS01 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    35349 7alj:A (1.52) BS03 CA ? GO:0005509 ... P07207 34347930
    35350 7alj:A (1.52) BS04 CA ? GO:0005509 ... P07207 34347930
    35351 7all:AAA (1.63) BS02 CA ? GO:0004065 ... Q89YP8 34616040
    35352 7alt:A (2.03) BS01 CA ? GO:0007154 ... P18168 34347930
    35353 7alt:B (2.03) BS01 CA ? GO:0007154 ... P18168 34347930
    35354 7amk:A (2.2) BS01 CA 2.7.10.1 GO:0005509 ... A8E7C6 33484636
    35355 7amk:A (2.2) BS02 CA 2.7.10.1 GO:0005509 ... A8E7C6 33484636
    35356 7amk:A (2.2) BS03 CA 2.7.10.1 GO:0005509 ... A8E7C6 33484636
    35357 7amk:B (2.2) BS01 CA 2.7.10.1 GO:0005509 ... A8E7C6 33484636
    35358 7amk:B (2.2) BS02 CA 2.7.10.1 GO:0005509 ... A8E7C6 33484636
    35359 7amk:B (2.2) BS03 CA 2.7.10.1 GO:0005509 ... A8E7C6 33484636
    35360 7aml:A (3.5) BS01 CA 2.7.10.1 GO:0005509 ... A8E7C6 33484636
    35361 7aml:A (3.5) BS02 CA 2.7.10.1 GO:0005509 ... A8E7C6 33484636
    35362 7aml:A (3.5) BS03 CA 2.7.10.1 GO:0005509 ... A8E7C6 33484636
    35363 7aml:A (3.5) BS04 CA 2.7.10.1 GO:0005509 ... A8E7C6 33484636
    35364 7aml:D (3.5) BS01 CA 2.7.10.1 GO:0005509 ... A8E7C6 33484636
    35365 7aml:D (3.5) BS02 CA 2.7.10.1 GO:0005509 ... A8E7C6 33484636
    35366 7aml:D (3.5) BS03 CA 2.7.10.1 GO:0005509 ... A8E7C6 33484636
    35367 7aml:D (3.5) BS04 CA 2.7.10.1 GO:0005509 ... A8E7C6 33484636
    35368 7an1:AAA (1.5) BS02 CA ? GO:0016787 ... Q8A789 34616040
    35369 7ana:AAA (2.3) BS01 CA ? GO:0016787 ... Q8A7A3 34616040
    35370 7ana:BBB (2.3) BS01 CA ? GO:0016787 ... Q8A7A3 34616040
    35371 7anb:AAA (2.6) BS02 CA ? GO:0016787 ... Q8A7A3 34616040
    35372 7anb:BBB (2.6) BS02 CA ? GO:0016787 ... Q8A7A3 34616040
    35373 7ap1:A (2.18) BS02 CA 6.1.1.11 GO:0000166 ... A6T6Z0 33081246
    35374 7ap1:A (2.18) BS03 CA 6.1.1.11 GO:0000166 ... A6T6Z0 33081246
    35375 7apy:A (1.778) BS01 CA 1.7.2.4 GO:0004129 ... P19573 33377777
    35376 7apy:B (1.778) BS01 CA 1.7.2.4 GO:0004129 ... P19573 33377777
    35377 7aq0:A (1.584) BS01 CA 1.7.2.4 GO:0004129 ... P19573 33377777
    35378 7aq0:B (1.584) BS01 CA 1.7.2.4 GO:0004129 ... P19573 33377777
    35379 7aq1:A (2.413) BS06 CA 3.4.24.63 GO:0004222 ... Q16820 34073350
    35380 7aq1:A (2.413) BS07 CA 3.4.24.63 GO:0004222 ... Q16820 34073350
    35381 7aq1:B (2.413) BS05 CA 3.4.24.63 GO:0004222 ... Q16820 34073350
    35382 7aq1:B (2.413) BS06 CA 3.4.24.63 GO:0004222 ... Q16820 34073350
    35383 7aq2:B (1.683) BS01 CA 1.7.2.4 GO:0005507 ... P19573 33377777
    35384 7aq3:B (1.639) BS01 CA 1.7.2.4 GO:0005507 ... P19573 33377777
    35385 7aq4:A (1.708) BS01 CA 1.7.2.4 GO:0005507 ... P19573 33377777
    35386 7aq4:B (1.708) BS01 CA 1.7.2.4 GO:0005507 ... P19573 33377777
    35387 7aq5:A (1.7) BS01 CA 1.7.2.4 GO:0005507 ... P19573 33377777
    35388 7aq5:B (1.7) BS01 CA 1.7.2.4 GO:0005507 ... P19573 33377777
    35389 7aq6:A (1.514) BS01 CA 1.7.2.4 GO:0005507 ... P19573 33377777
    35390 7aq6:B (1.514) BS01 CA 1.7.2.4 GO:0005507 ... P19573 33377777
    35391 7aq7:A (1.608) BS01 CA 1.7.2.4 GO:0005507 ... P19573 33377777
    35392 7aq7:B (1.608) BS01 CA 1.7.2.4 GO:0005507 ... P19573 33377777
    35393 7aq8:A (1.791) BS01 CA 1.7.2.4 GO:0005507 ... P19573 33377777
    35394 7aq8:B (1.791) BS01 CA 1.7.2.4 GO:0005507 ... P19573 33377777
    35395 7aq9:B (1.585) BS01 CA 1.7.2.4 GO:0005507 ... P19573 33377777
    35396 7aqa:A (1.497) BS02 CA 1.7.2.4 GO:0004129 ... P19573 34164092
    35397 7aqa:B (1.497) BS02 CA 1.7.2.4 GO:0004129 ... P19573 34164092
    35398 7aqp:A (2.6) BS02 CA 3.4.17.18 GO:0004181 ... P29068 N/A
    35399 7aqp:A (2.6) BS03 CA 3.4.17.18 GO:0004181 ... P29068 N/A
    35400 7aqp:A (2.6) BS04 CA 3.4.17.18 GO:0004181 ... P29068 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218