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BioLiP
Download all results in tab-seperated text for 44457 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    34401 6wxe:j (3.4) BS01 CA ? GO:0019028 ... P12476 33442061
    34402 6wxe:j (3.4) BS02 CA ? GO:0019028 ... P12476 33442061
    34403 6wxe:j (3.4) BS03 CA ? GO:0019028 ... P12476 33442061
    34404 6wxe:k (3.4) BS01 CA ? GO:0019028 ... P12476 33442061
    34405 6wxe:k (3.4) BS02 CA ? GO:0019028 ... P12476 33442061
    34406 6wxe:k (3.4) BS03 CA ? GO:0019028 ... P12476 33442061
    34407 6wxe:l (3.4) BS01 CA ? GO:0019028 ... P12476 33442061
    34408 6wxe:l (3.4) BS02 CA ? GO:0019028 ... P12476 33442061
    34409 6wxe:l (3.4) BS03 CA ? GO:0019028 ... P12476 33442061
    34410 6wxe:m (3.4) BS01 CA ? GO:0019028 ... P12476 33442061
    34411 6wxe:m (3.4) BS02 CA ? GO:0019028 ... P12476 33442061
    34412 6wxe:m (3.4) BS03 CA ? GO:0019028 ... P12476 33442061
    34413 6wxe:n (3.4) BS01 CA ? GO:0019028 ... P12476 33442061
    34414 6wxe:n (3.4) BS02 CA ? GO:0019028 ... P12476 33442061
    34415 6wxe:n (3.4) BS03 CA ? GO:0019028 ... P12476 33442061
    34416 6wxe:o (3.4) BS01 CA ? GO:0019028 ... P12476 33442061
    34417 6wxe:o (3.4) BS02 CA ? GO:0019028 ... P12476 33442061
    34418 6wxe:o (3.4) BS03 CA ? GO:0019028 ... P12476 33442061
    34419 6wxe:p (3.4) BS01 CA ? GO:0019028 ... P12476 33442061
    34420 6wxe:p (3.4) BS02 CA ? GO:0019028 ... P12476 33442061
    34421 6wxe:p (3.4) BS03 CA ? GO:0019028 ... P12476 33442061
    34422 6wxe:q (3.4) BS01 CA ? GO:0019028 ... P12476 33442061
    34423 6wxe:q (3.4) BS02 CA ? GO:0019028 ... P12476 33442061
    34424 6wxe:q (3.4) BS03 CA ? GO:0019028 ... P12476 33442061
    34425 6wxe:r (3.4) BS01 CA ? GO:0019028 ... P12476 33442061
    34426 6wxe:r (3.4) BS02 CA ? GO:0019028 ... P12476 33442061
    34427 6wxe:r (3.4) BS03 CA ? GO:0019028 ... P12476 33442061
    34428 6wxf:a (4.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34429 6wxf:a (4.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34430 6wxf:a (4.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34431 6wxf:b (4.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34432 6wxf:b (4.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34433 6wxf:b (4.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34434 6wxf:c (4.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34435 6wxf:c (4.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34436 6wxf:c (4.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34437 6wxf:d (4.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34438 6wxf:d (4.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34439 6wxf:d (4.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34440 6wxf:e (4.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34441 6wxf:e (4.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34442 6wxf:e (4.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34443 6wxf:f (4.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34444 6wxf:f (4.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34445 6wxf:f (4.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34446 6wxf:g (4.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34447 6wxf:g (4.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34448 6wxf:g (4.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34449 6wxf:h (4.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34450 6wxf:h (4.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34451 6wxf:h (4.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34452 6wxf:i (4.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34453 6wxf:i (4.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34454 6wxf:i (4.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34455 6wxf:j (4.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34456 6wxf:j (4.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34457 6wxf:k (4.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34458 6wxf:k (4.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34459 6wxf:k (4.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34460 6wxf:l (4.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34461 6wxf:l (4.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34462 6wxf:l (4.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34463 6wxf:m (4.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34464 6wxf:m (4.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34465 6wxf:m (4.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34466 6wxf:n (4.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34467 6wxf:n (4.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34468 6wxf:n (4.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34469 6wxf:o (4.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34470 6wxf:o (4.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34471 6wxf:o (4.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34472 6wxf:p (4.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34473 6wxf:p (4.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34474 6wxf:p (4.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34475 6wxf:q (4.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34476 6wxf:q (4.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34477 6wxf:q (4.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34478 6wxf:r (4.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34479 6wxf:r (4.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34480 6wxf:r (4.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34481 6wxg:a (3.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34482 6wxg:a (3.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34483 6wxg:a (3.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34484 6wxg:b (3.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34485 6wxg:b (3.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34486 6wxg:b (3.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34487 6wxg:c (3.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34488 6wxg:c (3.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34489 6wxg:c (3.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34490 6wxg:d (3.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34491 6wxg:d (3.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34492 6wxg:d (3.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34493 6wxg:e (3.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34494 6wxg:e (3.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34495 6wxg:e (3.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34496 6wxg:f (3.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34497 6wxg:f (3.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34498 6wxg:f (3.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34499 6wxg:g (3.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34500 6wxg:g (3.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34501 6wxg:g (3.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34502 6wxg:h (3.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34503 6wxg:h (3.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34504 6wxg:h (3.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34505 6wxg:i (3.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34506 6wxg:i (3.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34507 6wxg:i (3.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34508 6wxg:j (3.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34509 6wxg:j (3.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34510 6wxg:j (3.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34511 6wxg:k (3.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34512 6wxg:k (3.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34513 6wxg:k (3.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34514 6wxg:l (3.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34515 6wxg:l (3.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34516 6wxg:l (3.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34517 6wxg:m (3.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34518 6wxg:m (3.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34519 6wxg:m (3.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34520 6wxg:n (3.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34521 6wxg:n (3.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34522 6wxg:n (3.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34523 6wxg:o (3.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34524 6wxg:o (3.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34525 6wxg:o (3.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34526 6wxg:p (3.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34527 6wxg:p (3.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34528 6wxg:p (3.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34529 6wxg:q (3.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34530 6wxg:q (3.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34531 6wxg:q (3.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34532 6wxg:r (3.3) BS01 CA ? GO:0019028 ... P12476 33442061
    34533 6wxg:r (3.3) BS02 CA ? GO:0019028 ... P12476 33442061
    34534 6wxg:r (3.3) BS03 CA ? GO:0019028 ... P12476 33442061
    34535 6wxp:A (2.5) BS01 CA N/A N/A N/A 33203677
    34536 6wxp:B (2.5) BS01 CA N/A N/A N/A 33203677
    34537 6wxp:C (2.5) BS01 CA N/A N/A N/A 33203677
    34538 6wxp:D (2.5) BS01 CA N/A N/A N/A 33203677
    34539 6wxp:E (2.5) BS01 CA N/A N/A N/A 33203677
    34540 6wxp:F (2.5) BS01 CA N/A N/A N/A 33203677
    34541 6wxv:A (3.3) BS05 CA 1.6.3.1 GO:0004601 ... A2AQ92 32929281
    34542 6wxz:B (2.226) BS02 CA 1.11.2.2 GO:0004601 ... P05164 33007547
    34543 6wxz:E (2.226) BS02 CA 1.11.2.2 GO:0004601 ... P05164 33007547
    34544 6wy0:B (2.799) BS03 CA 1.11.2.2 GO:0004601 ... P05164 33007547
    34545 6wy0:E (2.799) BS04 CA 1.11.2.2 GO:0004601 ... P05164 33007547
    34546 6wy0:G (2.799) BS03 CA 1.11.2.2 GO:0004601 ... P05164 33007547
    34547 6wy0:I (2.799) BS03 CA 1.11.2.2 GO:0004601 ... P05164 33007547
    34548 6wy5:B (2.898) BS03 CA 1.11.2.2 GO:0004601 ... P05164 33007547
    34549 6wy5:E (2.898) BS03 CA 1.11.2.2 GO:0004601 ... P05164 33007547
    34550 6wy7:B (2.089) BS03 CA 1.11.2.2 GO:0004601 ... P05164 33007547
    34551 6wy7:E (2.089) BS03 CA 1.11.2.2 GO:0004601 ... P05164 33007547
    34552 6wyd:B (2.55) BS04 CA 1.11.2.2 GO:0004601 ... P05164 33007547
    34553 6wyd:E (2.55) BS05 CA 1.11.2.2 GO:0004601 ... P05164 33007547
    34554 6wyd:G (2.55) BS05 CA 1.11.2.2 GO:0004601 ... P05164 33007547
    34555 6wyd:I (2.55) BS06 CA 1.11.2.2 GO:0004601 ... P05164 33007547
    34556 6wyf:A (1.25) BS01 CA 1.16.3.1 GO:0004322 ... P02794 33124805
    34557 6wyf:A (1.25) BS02 CA 1.16.3.1 GO:0004322 ... P02794 33124805
    34558 6wyf:A (1.25) BS03 CA 1.16.3.1 GO:0004322 ... P02794 33124805
    34559 6wyf:A (1.25) BS04 CA 1.16.3.1 GO:0004322 ... P02794 33124805
    34560 6wyf:A (1.25) BS05 CA 1.16.3.1 GO:0004322 ... P02794 33124805
    34561 6wyg:A (2.27) BS03 CA 1.16.3.1 GO:0004322 ... P02794 33124805
    34562 6wyg:C (2.27) BS03 CA 1.16.3.1 GO:0004322 ... P02794 33124805
    34563 6wyg:D (2.27) BS03 CA 1.16.3.1 GO:0004322 ... P02794 33124805
    34564 6wyh:C (2.22) BS03 CA 1.16.3.1 GO:0004322 ... P02794 33124805
    34565 6wz1:C (1.999) BS03 CA ? GO:0005506 ... P0ABE7 32830423
    34566 6wz7:A (2.3) BS03 CA ? GO:0005506 ... P0ABE7 32830423
    34567 6wz7:A (2.3) BS04 CA ? GO:0005506 ... P0ABE7 32830423
    34568 6wz7:B (2.3) BS03 CA ? GO:0005506 ... P0ABE7 32830423
    34569 6wz7:B (2.3) BS04 CA ? GO:0005506 ... P0ABE7 32830423
    34570 6wz7:C (2.3) BS03 CA ? GO:0005506 ... P0ABE7 32830423
    34571 6wzc:A (2.195) BS02 CA ? GO:0005506 ... P0ABE7 32830423
    34572 6x0o:A (3.3) BS01 CA 2.4.2.- GO:0005886 ... A0R614 32636380
    34573 6x0o:A (3.3) BS02 CA 2.4.2.- GO:0005886 ... A0R614 32636380
    34574 6x1c:A (2.9) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 34406768
    34575 6x1c:C (2.9) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 34406768
    34576 6x1e:A (2.9) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 34406768
    34577 6x1e:C (2.9) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 34406768
    34578 6x1f:A (2.7) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 34406768
    34579 6x1f:C (2.7) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 34406768
    34580 6x42:X (1.2) BS01 CA 3.4.22.- GO:0006508 ... Q9TY95 32955133
    34581 6x42:X (1.2) BS02 CA 3.4.22.- GO:0006508 ... Q9TY95 32955133
    34582 6x5v:A (1.6) BS02 CA ? N/A A1YIY3 N/A
    34583 6x5v:A (1.6) BS03 CA ? N/A A1YIY3 N/A
    34584 6x5v:A (1.6) BS04 CA ? N/A A1YIY3 N/A
    34585 6x5v:A (1.6) BS05 CA ? N/A A1YIY3 N/A
    34586 6x5v:A (1.6) BS06 CA ? N/A A1YIY3 N/A
    34587 6x5v:A (1.6) BS07 CA ? N/A A1YIY3 N/A
    34588 6x5v:A (1.6) BS08 CA ? N/A A1YIY3 N/A
    34589 6x5v:A (1.6) BS09 CA ? N/A A1YIY3 N/A
    34590 6x5v:A (1.6) BS10 CA ? N/A A1YIY3 N/A
    34591 6x5v:A (1.6) BS11 CA ? N/A A1YIY3 N/A
    34592 6x5v:A (1.6) BS12 CA ? N/A A1YIY3 N/A
    34593 6x5v:A (1.6) BS13 CA ? N/A A1YIY3 N/A
    34594 6x5v:A (1.6) BS14 CA ? N/A A1YIY3 N/A
    34595 6x5v:A (1.6) BS15 CA ? N/A A1YIY3 N/A
    34596 6x5v:A (1.6) BS16 CA ? N/A A1YIY3 N/A
    34597 6x5v:A (1.6) BS17 CA ? N/A A1YIY3 N/A
    34598 6x5w:A (1.8) BS02 CA ? N/A A1YIY3 N/A
    34599 6x5w:A (1.8) BS03 CA ? N/A A1YIY3 N/A
    34600 6x5w:A (1.8) BS04 CA ? N/A A1YIY3 N/A
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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