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BioLiP
Download all results in tab-seperated text for 44457 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    33001 6t8e:D (1.86) BS02 CA 5.3.1.5 GO:0005975 ... Q9P8C9 31938040
    33002 6t8f:A (2.0) BS01 CA 5.3.1.5 GO:0005975 ... Q9P8C9 31938040
    33003 6t8f:A (2.0) BS02 CA 5.3.1.5 GO:0005975 ... Q9P8C9 31938040
    33004 6t8f:B (2.0) BS01 CA 5.3.1.5 GO:0005975 ... Q9P8C9 31938040
    33005 6t8f:B (2.0) BS02 CA 5.3.1.5 GO:0005975 ... Q9P8C9 31938040
    33006 6t8f:C (2.0) BS02 CA 5.3.1.5 GO:0005975 ... Q9P8C9 31938040
    33007 6t8f:C (2.0) BS03 CA 5.3.1.5 GO:0005975 ... Q9P8C9 31938040
    33008 6t8f:D (2.0) BS01 CA 5.3.1.5 GO:0005975 ... Q9P8C9 31938040
    33009 6t8f:D (2.0) BS02 CA 5.3.1.5 GO:0005975 ... Q9P8C9 31938040
    33010 6t9u:A (1.06751) BS03 CA 3.4.21.4 GO:0004252 ... P00760 N/A
    33011 6t9v:A (1.12643) BS02 CA 3.4.21.4 GO:0004252 ... P00760 N/A
    33012 6t9y:A (1.92) BS03 CA 3.4.17.18 GO:0004181 ... P29068 N/A
    33013 6t9y:A (1.92) BS04 CA 3.4.17.18 GO:0004181 ... P29068 N/A
    33014 6t9y:A (1.92) BS05 CA 3.4.17.18 GO:0004181 ... P29068 N/A
    33015 6t9y:A (1.92) BS06 CA 3.4.17.18 GO:0004181 ... P29068 N/A
    33016 6taa:A (2.1) BS01 CA 3.2.1.1 GO:0004556 ... P0C1B3 1930835
    33017 6taa:A (2.1) BS02 CA 3.2.1.1 GO:0004556 ... P0C1B3 1930835
    33018 6tb5:A (1.83) BS01 CA 1.16.-.- GO:0008199 ... Q9RZN1 N/A
    33019 6tb5:A (1.83) BS02 CA 1.16.-.- GO:0008199 ... Q9RZN1 N/A
    33020 6tcb:B (1.35) BS01 CA ? GO:0046872 ... Q9I0B9 N/A
    33021 6tfl:A (2.397) BS01 CA ? GO:0003723 ... B0R5R2 34284708
    33022 6tfl:B (2.397) BS01 CA ? GO:0003723 ... B0R5R2 34284708
    33023 6tfl:D (2.397) BS01 CA ? GO:0003723 ... B0R5R2 34284708
    33024 6tfl:D (2.397) BS02 CA ? GO:0003723 ... B0R5R2 34284708
    33025 6tfl:E (2.397) BS01 CA ? GO:0003723 ... B0R5R2 34284708
    33026 6tfl:H (2.397) BS01 CA ? GO:0003723 ... B0R5R2 34284708
    33027 6tfl:I (2.397) BS01 CA ? GO:0003723 ... B0R5R2 34284708
    33028 6tfl:J (2.397) BS01 CA ? GO:0003723 ... B0R5R2 34284708
    33029 6tg2:A (2.21) BS02 CA ? GO:0042597 ... Q44384 31922182
    33030 6tg2:A (2.21) BS03 CA ? GO:0042597 ... Q44384 31922182
    33031 6tg2:A (2.21) BS04 CA ? GO:0042597 ... Q44384 31922182
    33032 6tg2:B (2.21) BS02 CA ? GO:0042597 ... Q44384 31922182
    33033 6tgd:A (1.33) BS03 CA 3.5.2.6 GO:0016787 ... M4JT39 32728062
    33034 6tgd:A (1.33) BS04 CA 3.5.2.6 GO:0016787 ... M4JT39 32728062
    33035 6tgd:B (1.33) BS03 CA 3.5.2.6 GO:0016787 ... M4JT39 32728062
    33036 6tgd:B (1.33) BS04 CA 3.5.2.6 GO:0016787 ... M4JT39 32728062
    33037 6tgk:C (1.3) BS01 CA 2.3.2.26 GO:0000209 ... Q05086 31994269
    33038 6tgt:A (2.155) BS01 CA 1.16.-.- GO:0008199 ... Q9RZN1 N/A
    33039 6th5:A (1.99) BS01 CA 2.3.2.15 GO:0010038 ... Q8YY76 N/A
    33040 6th5:A (1.99) BS02 CA 2.3.2.15 GO:0010038 ... Q8YY76 N/A
    33041 6th5:B (1.99) BS01 CA 2.3.2.15 GO:0010038 ... Q8YY76 N/A
    33042 6th5:B (1.99) BS02 CA 2.3.2.15 GO:0010038 ... Q8YY76 N/A
    33043 6th7:A (2.2) BS03 CA 3.4.21.36 GO:0004252 ... P00772 31935054
    33044 6th7:B (2.2) BS02 CA 3.4.21.36 GO:0004252 ... P00772 31935054
    33045 6th7:B (2.2) BS03 CA 3.4.21.36 GO:0004252 ... P00772 31935054
    33046 6tho:A (1.09) BS02 CA 2.3.2.15 GO:0010038 ... Q8YY76 35377603
    33047 6tho:A (1.09) BS03 CA 2.3.2.15 GO:0010038 ... Q8YY76 35377603
    33048 6tho:A (1.09) BS04 CA 2.3.2.15 GO:0010038 ... Q8YY76 35377603
    33049 6tho:B (1.09) BS02 CA 2.3.2.15 GO:0010038 ... Q8YY76 35377603
    33050 6tit:A (2.07) BS01 CA ? GO:0019031 ... B7UCZ5 32814045
    33051 6tit:A (2.07) BS02 CA ? GO:0019031 ... B7UCZ5 32814045
    33052 6tit:A (2.07) BS03 CA ? GO:0019031 ... B7UCZ5 32814045
    33053 6tj5:A (2.394) BS01 CA ? GO:0005509 ... A0A0F7UZ05 33051581
    33054 6tj7:A (2.3) BS01 CA ? GO:0005509 ... B9PZ33 33051581
    33055 6tj8:A (0.921) BS02 CA 2.2.1.1 GO:0000287 ... P27302 32839604
    33056 6tj8:B (0.921) BS03 CA 2.2.1.1 GO:0000287 ... P27302 32839604
    33057 6tj9:A (0.95) BS03 CA 2.2.1.1 GO:0000287 ... P27302 32839604
    33058 6tj9:B (0.95) BS04 CA 2.2.1.1 GO:0000287 ... P27302 32839604
    33059 6tjl:A (1.87) BS01 CA 2.3.2.15 GO:0010038 ... Q8YY76 N/A
    33060 6tjl:A (1.87) BS02 CA 2.3.2.15 GO:0010038 ... Q8YY76 N/A
    33061 6tjl:B (1.87) BS01 CA 2.3.2.15 GO:0010038 ... Q8YY76 N/A
    33062 6tjl:B (1.87) BS02 CA 2.3.2.15 GO:0010038 ... Q8YY76 N/A
    33063 6tli:A (2.1) BS02 CA 3.4.24.27 GO:0004222 ... P00800 10651278
    33064 6tli:A (2.1) BS03 CA 3.4.24.27 GO:0004222 ... P00800 10651278
    33065 6tli:A (2.1) BS04 CA 3.4.24.27 GO:0004222 ... P00800 10651278
    33066 6tli:A (2.1) BS05 CA 3.4.24.27 GO:0004222 ... P00800 10651278
    33067 6tm2:A (2.95) BS01 CA ? N/A Q02817 33031746
    33068 6tm2:A (2.95) BS02 CA ? N/A Q02817 33031746
    33069 6tm2:B (2.95) BS01 CA ? N/A Q02817 33031746
    33070 6tm2:B (2.95) BS02 CA ? N/A Q02817 33031746
    33071 6tm2:C (2.95) BS01 CA ? N/A Q02817 33031746
    33072 6tm2:D (2.95) BS01 CA ? N/A Q02817 33031746
    33073 6tm2:E (2.95) BS01 CA ? N/A Q02817 33031746
    33074 6tm2:E (2.95) BS02 CA ? N/A Q02817 33031746
    33075 6tm2:F (2.95) BS01 CA ? N/A Q02817 33031746
    33076 6tm2:F (2.95) BS02 CA ? N/A Q02817 33031746
    33077 6tm6:A (1.63) BS01 CA ? N/A Q02817 33031746
    33078 6tm6:A (1.63) BS02 CA ? N/A Q02817 33031746
    33079 6tmn:E (1.6) BS02 CA 3.4.24.27 GO:0004222 ... P00800 3810156
    33080 6tmn:E (1.6) BS03 CA 3.4.24.27 GO:0004222 ... P00800 3810156
    33081 6tmn:E (1.6) BS04 CA 3.4.24.27 GO:0004222 ... P00800 3810156
    33082 6tmn:E (1.6) BS05 CA 3.4.24.27 GO:0004222 ... P00800 3810156
    33083 6tnj:A (1.85) BS01 CA ? N/A B2RHG5 33495563
    33084 6tnj:A (1.85) BS02 CA ? N/A B2RHG5 33495563
    33085 6tnk:A (1.9) BS03 CA 3.4.17.18 GO:0004181 ... P29068 N/A
    33086 6tnk:A (1.9) BS04 CA 3.4.17.18 GO:0004181 ... P29068 N/A
    33087 6tnk:A (1.9) BS05 CA 3.4.17.18 GO:0004181 ... P29068 N/A
    33088 6tnk:A (1.9) BS06 CA 3.4.17.18 GO:0004181 ... P29068 N/A
    33089 6tnk:A (1.9) BS07 CA 3.4.17.18 GO:0004181 ... P29068 N/A
    33090 6to1:A (1.8) BS02 CA ? N/A B2RHG5 33495563
    33091 6toy:A (1.95) BS01 CA 3.2.1.1 GO:0004553 ... I3P686 33058974
    33092 6toy:A (1.95) BS02 CA 3.2.1.1 GO:0004553 ... I3P686 33058974
    33093 6toz:A (1.94) BS05 CA 3.2.1.1 GO:0004553 ... I3P686 33058974
    33094 6toz:A (1.94) BS06 CA 3.2.1.1 GO:0004553 ... I3P686 33058974
    33095 6tp0:A (2.04) BS03 CA 3.2.1.1 GO:0004553 ... I3P686 33058974
    33096 6tp0:A (2.04) BS04 CA 3.2.1.1 GO:0004553 ... I3P686 33058974
    33097 6tp1:A (1.94) BS04 CA 3.2.1.1 GO:0004553 ... I3P686 33058974
    33098 6tp1:A (1.94) BS05 CA 3.2.1.1 GO:0004553 ... I3P686 33058974
    33099 6tp2:A (1.94) BS02 CA 3.2.1.1 GO:0004553 ... I3P686 33058974
    33100 6tp2:A (1.94) BS03 CA 3.2.1.1 GO:0004553 ... I3P686 33058974
    33101 6tp5:A (2.25) BS03 CA 1.14.11.29 GO:0005506 ... Q9NXG6 33334883
    33102 6tp5:A (2.25) BS04 CA 1.14.11.29 GO:0005506 ... Q9NXG6 33334883
    33103 6tp5:B (2.25) BS03 CA 1.14.11.29 GO:0005506 ... Q9NXG6 33334883
    33104 6tp5:B (2.25) BS04 CA 1.14.11.29 GO:0005506 ... Q9NXG6 33334883
    33105 6tr3:A (1.7) BS05 CA 3.2.1.187 GO:0004560 ... A0A6N3BKT0 32333083
    33106 6tr3:A (1.7) BS06 CA 3.2.1.187 GO:0004560 ... A0A6N3BKT0 32333083
    33107 6tr4:A (1.45) BS05 CA 3.2.1.187 GO:0004560 ... A0A6N3BKT0 32333083
    33108 6tr4:A (1.45) BS06 CA 3.2.1.187 GO:0004560 ... A0A6N3BKT0 32333083
    33109 6tr4:A (1.45) BS07 CA 3.2.1.187 GO:0004560 ... A0A6N3BKT0 32333083
    33110 6tr4:B (1.45) BS04 CA 3.2.1.187 GO:0004560 ... A0A6N3BKT0 32333083
    33111 6tr4:B (1.45) BS05 CA 3.2.1.187 GO:0004560 ... A0A6N3BKT0 32333083
    33112 6tr4:B (1.45) BS06 CA 3.2.1.187 GO:0004560 ... A0A6N3BKT0 32333083
    33113 6tra:B (2.85) BS09 CA 1.97.1.12 GO:0000287 ... P0A407 N/A
    33114 6tra:L (2.85) BS05 CA ? GO:0009522 ... Q8DGB4 N/A
    33115 6trc:0 (2.98) BS06 CA ? GO:0009522 ... Q8DGB4 N/A
    33116 6trc:2 (2.98) BS08 CA 1.97.1.12 GO:0000287 ... P0A407 N/A
    33117 6trc:B (2.98) BS08 CA 1.97.1.12 GO:0000287 ... P0A407 N/A
    33118 6trc:L (2.98) BS04 CA ? GO:0009522 ... Q8DGB4 N/A
    33119 6trc:b (2.98) BS08 CA 1.97.1.12 GO:0000287 ... P0A407 N/A
    33120 6trc:l (2.98) BS05 CA ? GO:0009522 ... Q8DGB4 N/A
    33121 6trd:0 (3.16) BS04 CA ? GO:0009522 ... Q8DGB4 N/A
    33122 6trd:2 (3.16) BS08 CA 1.97.1.12 GO:0000287 ... P0A407 N/A
    33123 6trd:B (3.16) BS09 CA 1.97.1.12 GO:0000287 ... P0A407 N/A
    33124 6trd:L (3.16) BS04 CA ? GO:0009522 ... Q8DGB4 N/A
    33125 6trd:b (3.16) BS08 CA 1.97.1.12 GO:0000287 ... P0A407 N/A
    33126 6trd:l (3.16) BS05 CA ? GO:0009522 ... Q8DGB4 N/A
    33127 6trf:A (4.106) BS02 CA ? GO:0003980 ... G0SB58 33352114
    33128 6ts2:A (5.74) BS01 CA ? GO:0003980 ... G0SB58 33352114
    33129 6ts2:B (5.74) BS01 CA ? GO:0003980 ... G0SB58 33352114
    33130 6ts2:C (5.74) BS01 CA ? GO:0003980 ... G0SB58 33352114
    33131 6ts2:D (5.74) BS01 CA ? GO:0003980 ... G0SB58 33352114
    33132 6tsd:111 (1.81) BS02 CA 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15    		 GO:0005198 ... V9VEF3 32845119
    33133 6tsd:111 (1.81) BS03 CA 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15    		 GO:0005198 ... V9VEF3 32845119
    33134 6tsd:444 (1.81) BS01 CA 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15    		 GO:0005198 ... V9VEF3 32845119
    33135 6tsl:AAA (1.4) BS06 CA ? GO:0046872 ... Q8X123 34235469
    33136 6tsl:AAA (1.4) BS07 CA ? GO:0046872 ... Q8X123 34235469
    33137 6tsm:AAA (1.4) BS06 CA ? GO:0046872 ... Q8X123 34235469
    33138 6tsm:AAA (1.4) BS07 CA ? GO:0046872 ... Q8X123 34235469
    33139 6tsn:AAA (1.6) BS07 CA ? GO:0046872 ... Q8X123 34235469
    33140 6tsn:AAA (1.6) BS08 CA ? GO:0046872 ... Q8X123 34235469
    33141 6tso:AAA (2.1) BS07 CA ? GO:0046872 ... Q8X123 34235469
    33142 6tso:AAA (2.1) BS08 CA ? GO:0046872 ... Q8X123 34235469
    33143 6tsp:AAA (1.85) BS07 CA ? GO:0046872 ... Q8X123 N/A
    33144 6tsp:AAA (1.85) BS08 CA ? GO:0046872 ... Q8X123 N/A
    33145 6tsq:AAA (1.85) BS09 CA ? GO:0046872 ... Q8X123 34235469
    33146 6tsr:AAA (1.85) BS07 CA ? GO:0046872 ... Q8X123 34235469
    33147 6tsr:AAA (1.85) BS08 CA ? GO:0046872 ... Q8X123 34235469
    33148 6tt9:AAA (1.9) BS01 CA ? GO:0030246 ... Q40750 32340396
    33149 6tt9:BBB (1.9) BS01 CA ? GO:0030246 ... Q40750 32340396
    33150 6tt9:CCC (1.9) BS01 CA ? GO:0030246 ... Q40750 32340396
    33151 6tt9:DDD (1.9) BS01 CA ? GO:0030246 ... Q40750 32340396
    33152 6tu2:A (2.3) BS01 CA ? GO:0005509 ... Q5XI77 32344647
    33153 6tu2:A (2.3) BS02 CA ? GO:0005509 ... Q5XI77 32344647
    33154 6tu2:A (2.3) BS03 CA ? GO:0005509 ... Q5XI77 32344647
    33155 6tu2:B (2.3) BS01 CA ? GO:0005509 ... Q5XI77 32344647
    33156 6tu2:B (2.3) BS02 CA ? GO:0005509 ... Q5XI77 32344647
    33157 6tu2:B (2.3) BS03 CA ? GO:0005509 ... Q5XI77 32344647
    33158 6tu2:B (2.3) BS04 CA ? GO:0005509 ... Q5XI77 32344647
    33159 6tu2:C (2.3) BS01 CA ? GO:0005509 ... Q5XI77 32344647
    33160 6tu2:C (2.3) BS02 CA ? GO:0005509 ... Q5XI77 32344647
    33161 6tu2:C (2.3) BS03 CA ? GO:0005509 ... Q5XI77 32344647
    33162 6tv7:A (2.9) BS01 CA ? GO:0000086 ... P0DP23 34845372
    33163 6tv7:A (2.9) BS02 CA ? GO:0000086 ... P0DP23 34845372
    33164 6tv7:A (2.9) BS03 CA ? GO:0000086 ... P0DP23 34845372
    33165 6tv7:A (2.9) BS04 CA ? GO:0000086 ... P0DP23 34845372
    33166 6tvd:A (2.7) BS02 CA ? GO:0019031 ... A0A0A7HR51 33031770
    33167 6tvd:K (2.7) BS02 CA ? GO:0019031 ... A0A0A7HR51 33031770
    33168 6tve:P (1.05) BS01 CA 3.1.3.35
    3.1.3.5
    3.1.3.89
    3.1.3.91
    3.1.3.99    		 GO:0000166 ... P21589 32045236
    33169 6tvf:A (2.6) BS02 CA ? GO:0019031 ... A0A0A7HR51 33031770
    33170 6tvf:I (2.6) BS02 CA ? GO:0019031 ... A0A0A7HR51 33031770
    33171 6tvg:A (1.48) BS04 CA 3.1.3.35
    3.1.3.5
    3.1.3.89
    3.1.3.91
    3.1.3.99    		 GO:0000166 ... P21589 32045236
    33172 6tvr:K (2.63) BS01 CA ? GO:0019031 ... A0A0A7HR51 33031770
    33173 6tw4:A (1.73) BS02 CA ? GO:0003677 ... O74036 33662256
    33174 6tw9:A (1.52) BS02 CA ? GO:0003677 ... O74036 33662256
    33175 6twa:A (2.0) BS04 CA 3.1.3.35
    3.1.3.5
    3.1.3.89
    3.1.3.91
    3.1.3.99    		 GO:0000166 ... P21589 32045236
    33176 6twf:A (2.5) BS03 CA 3.1.3.35
    3.1.3.5
    3.1.3.89
    3.1.3.91
    3.1.3.99    		 GO:0000166 ... P21589 32045236
    33177 6twq:A (2.65) BS02 CA ? GO:0001525 ... H7C535
    P07355    		 32294469
    33178 6twq:A (2.65) BS03 CA ? GO:0001525 ... H7C535
    P07355    		 32294469
    33179 6twq:A (2.65) BS04 CA ? GO:0001525 ... H7C535
    P07355    		 32294469
    33180 6twq:A (2.65) BS05 CA ? GO:0001525 ... H7C535
    P07355    		 32294469
    33181 6twq:A (2.65) BS06 CA ? GO:0001525 ... H7C535
    P07355    		 32294469
    33182 6twq:B (2.65) BS02 CA ? GO:0001525 ... H7C535
    P07355    		 32294469
    33183 6twq:B (2.65) BS03 CA ? GO:0001525 ... H7C535
    P07355    		 32294469
    33184 6twq:B (2.65) BS04 CA ? GO:0001525 ... H7C535
    P07355    		 32294469
    33185 6twq:B (2.65) BS05 CA ? GO:0001525 ... H7C535
    P07355    		 32294469
    33186 6twq:B (2.65) BS06 CA ? GO:0001525 ... H7C535
    P07355    		 32294469
    33187 6twq:B (2.65) BS07 CA ? GO:0001525 ... H7C535
    P07355    		 32294469
    33188 6twt:A (0.95) BS03 CA 3.5.2.6 GO:0008270 ... C7C422 32353499
    33189 6twt:A (0.95) BS04 CA 3.5.2.6 GO:0008270 ... C7C422 32353499
    33190 6twt:B (0.95) BS03 CA 3.5.2.6 GO:0008270 ... C7C422 32353499
    33191 6twt:B (0.95) BS04 CA 3.5.2.6 GO:0008270 ... C7C422 32353499
    33192 6twu:A (2.4) BS01 CA ? GO:0001525 ... P07355
    Q96QZ7    		 32294469
    33193 6twu:A (2.4) BS02 CA ? GO:0001525 ... P07355
    Q96QZ7    		 32294469
    33194 6twu:A (2.4) BS03 CA ? GO:0001525 ... P07355
    Q96QZ7    		 32294469
    33195 6twu:A (2.4) BS04 CA ? GO:0001525 ... P07355
    Q96QZ7    		 32294469
    33196 6twu:B (2.4) BS02 CA ? GO:0001525 ... P07355
    Q96QZ7    		 32294469
    33197 6twu:B (2.4) BS03 CA ? GO:0001525 ... P07355
    Q96QZ7    		 32294469
    33198 6twu:B (2.4) BS04 CA ? GO:0001525 ... P07355
    Q96QZ7    		 32294469
    33199 6twu:B (2.4) BS05 CA ? GO:0001525 ... P07355
    Q96QZ7    		 32294469
    33200 6twx:A (2.3) BS02 CA ? GO:0001525 ... P07355
    Q96QZ7    		 32294469
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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