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BioLiP
Download all results in tab-seperated text for 44457 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    32401 6qlb:B (2.32) BS02 CA ? GO:0005509 ... P04632 N/A
    32402 6qlb:B (2.32) BS03 CA ? GO:0005509 ... P04632 N/A
    32403 6qlb:B (2.32) BS04 CA ? GO:0005509 ... P04632 N/A
    32404 6qlb:B (2.32) BS05 CA ? GO:0005509 ... P04632 N/A
    32405 6qlb:C (2.32) BS01 CA ? GO:0005509 ... P04632 N/A
    32406 6qlb:C (2.32) BS02 CA ? GO:0005509 ... P04632 N/A
    32407 6qlb:C (2.32) BS03 CA ? GO:0005509 ... P04632 N/A
    32408 6qlb:C (2.32) BS04 CA ? GO:0005509 ... P04632 N/A
    32409 6qlb:C (2.32) BS05 CA ? GO:0005509 ... P04632 N/A
    32410 6qlb:D (2.32) BS01 CA ? GO:0005509 ... P04632 N/A
    32411 6qlb:D (2.32) BS02 CA ? GO:0005509 ... P04632 N/A
    32412 6qlb:D (2.32) BS03 CA ? GO:0005509 ... P04632 N/A
    32413 6qlb:D (2.32) BS04 CA ? GO:0005509 ... P04632 N/A
    32414 6qlb:D (2.32) BS05 CA ? GO:0005509 ... P04632 N/A
    32415 6qm3:A (2.0) BS01 CA ? N/A O88998 31726976
    32416 6qm3:B (2.0) BS01 CA ? N/A O88998 31726976
    32417 6qm5:A (3.6) BS01 CA ? GO:0005254 ... C7Z7K1 30785398
    32418 6qm5:A (3.6) BS02 CA ? GO:0005254 ... C7Z7K1 30785398
    32419 6qm5:B (3.6) BS01 CA ? GO:0005254 ... C7Z7K1 30785398
    32420 6qm5:B (3.6) BS02 CA ? GO:0005254 ... C7Z7K1 30785398
    32421 6qm9:A (3.6) BS01 CA ? GO:0005254 ... C7Z7K1 30785398
    32422 6qm9:A (3.6) BS02 CA ? GO:0005254 ... C7Z7K1 30785398
    32423 6qm9:B (3.6) BS01 CA ? GO:0005254 ... C7Z7K1 30785398
    32424 6qm9:B (3.6) BS02 CA ? GO:0005254 ... C7Z7K1 30785398
    32425 6qma:A (3.7) BS01 CA ? GO:0005254 ... C7Z7K1 30785398
    32426 6qma:A (3.7) BS02 CA ? GO:0005254 ... C7Z7K1 30785398
    32427 6qma:B (3.7) BS01 CA ? GO:0005254 ... C7Z7K1 30785398
    32428 6qma:B (3.7) BS02 CA ? GO:0005254 ... C7Z7K1 30785398
    32429 6qmb:A (3.6) BS01 CA ? GO:0005254 ... C7Z7K1 30785398
    32430 6qmb:A (3.6) BS02 CA ? GO:0005254 ... C7Z7K1 30785398
    32431 6qmb:B (3.6) BS01 CA ? GO:0005254 ... C7Z7K1 30785398
    32432 6qmb:B (3.6) BS02 CA ? GO:0005254 ... C7Z7K1 30785398
    32433 6qp6:A (3.2) BS01 CA ? GO:0002407 ... Q6P9J9 30785399
    32434 6qp6:A (3.2) BS02 CA ? GO:0002407 ... Q6P9J9 30785399
    32435 6qp6:A (3.2) BS03 CA ? GO:0002407 ... Q6P9J9 30785399
    32436 6qp6:B (3.2) BS01 CA ? GO:0002407 ... Q6P9J9 30785399
    32437 6qp6:B (3.2) BS02 CA ? GO:0002407 ... Q6P9J9 30785399
    32438 6qp6:B (3.2) BS03 CA ? GO:0002407 ... Q6P9J9 30785399
    32439 6qpc:A (3.5) BS01 CA ? GO:0002407 ... Q6P9J9 30785399
    32440 6qpc:A (3.5) BS02 CA ? GO:0002407 ... Q6P9J9 30785399
    32441 6qpc:B (3.5) BS01 CA ? GO:0002407 ... Q6P9J9 30785399
    32442 6qpc:B (3.5) BS02 CA ? GO:0002407 ... Q6P9J9 30785399
    32443 6qph:B (3.4) BS46 CA 1.97.1.12 GO:0000287 ... D0FXZ0 32123351
    32444 6qps:A (1.287) BS01 CA 3.2.1.22
    3.2.1.n1    		 GO:0004557 ... E2NM07 31530640
    32445 6qps:B (1.287) BS01 CA 3.2.1.22
    3.2.1.n1    		 GO:0004557 ... E2NM07 31530640
    32446 6qq5:A (3.9) BS04 CA N/A GO:0004129 ... N/A 31489376
    32447 6qq5:B (3.9) BS04 CA N/A GO:0004129 ... N/A 31489376
    32448 6qq6:A (3.3) BS04 CA N/A GO:0004129 ... N/A 31489376
    32449 6qq6:B (3.3) BS04 CA N/A GO:0004129 ... N/A 31489376
    32450 6qqn:A (2.301) BS02 CA 3.6.5.- GO:0000226 ... P81947 31302152
    32451 6qqn:C (2.301) BS02 CA 3.6.5.- GO:0000226 ... P81947 31302152
    32452 6qs9:A (2.802) BS02 CA ? GO:0005615 ... P02769 31460455
    32453 6qs9:B (2.802) BS02 CA ? GO:0005615 ... P02769 31460455
    32454 6qs9:B (2.802) BS03 CA ? GO:0005615 ... P02769 31460455
    32455 6qtn:A (1.9) BS02 CA 3.6.5.- GO:0000226 ... P81947 30897704
    32456 6qtn:C (1.9) BS02 CA 3.6.5.- GO:0000226 ... P81947 30897704
    32457 6qub:A (1.95) BS02 CA 3.2.1.23 GO:0004553 ... Q9F4D5 N/A
    32458 6qub:A (1.95) BS03 CA 3.2.1.23 GO:0004553 ... Q9F4D5 N/A
    32459 6qub:B (1.95) BS02 CA 3.2.1.23 GO:0004553 ... Q9F4D5 N/A
    32460 6qub:B (1.95) BS03 CA 3.2.1.23 GO:0004553 ... Q9F4D5 N/A
    32461 6quc:A (2.3) BS01 CA 3.2.1.23 GO:0004553 ... Q9F4D5 N/A
    32462 6quc:A (2.3) BS02 CA 3.2.1.23 GO:0004553 ... Q9F4D5 N/A
    32463 6quc:B (2.3) BS01 CA 3.2.1.23 GO:0004553 ... Q9F4D5 N/A
    32464 6quc:B (2.3) BS02 CA 3.2.1.23 GO:0004553 ... Q9F4D5 N/A
    32465 6qud:A (2.1) BS02 CA 3.2.1.23 GO:0004553 ... Q9F4D5 N/A
    32466 6qvm:A (2.5) BS12 CA N/A N/A N/A N/A
    32467 6qw3:A (1.3) BS01 CA ? GO:0051015 ... P06396 31416615
    32468 6qxf:A (3.6) BS01 CA ? GO:0003677 ... G3ECR4 31080012
    32469 6qxf:A (3.6) BS02 CA ? GO:0003677 ... G3ECR4 31080012
    32470 6qxf:B (3.6) BS01 CA ? GO:0003677 ... G3ECR4 31080012
    32471 6qxf:C (3.6) BS01 CA ? GO:0003677 ... G3ECR4 31080012
    32472 6qxf:D (3.6) BS01 CA ? GO:0003677 ... G3ECR4 31080012
    32473 6qxf:E (3.6) BS01 CA ? GO:0003677 ... G3ECR4 31080012
    32474 6qxf:F (3.6) BS01 CA ? GO:0003677 ... G3ECR4 31080012
    32475 6qxf:G (3.6) BS01 CA ? GO:0003677 ... G3ECR4 31080012
    32476 6qxf:H (3.6) BS01 CA ? GO:0003677 ... G3ECR4 31080012
    32477 6qxr:A (1.2) BS03 CA ? GO:0000287 ... B1MD73 32128972
    32478 6qxv:A (1.94) BS01 CA 3.4.21.64 GO:0004252 ... P06873 31576225
    32479 6qxv:A (1.94) BS02 CA 3.4.21.64 GO:0004252 ... P06873 31576225
    32480 6qyc:A (2.29) BS11 CA ? GO:0016491 ... P0DSN4 32289252
    32481 6qyc:A (2.29) BS12 CA ? GO:0016491 ... P0DSN4 32289252
    32482 6qyc:B (2.29) BS13 CA ? GO:0016491 ... P0DSN4 32289252
    32483 6qyc:B (2.29) BS14 CA ? GO:0016491 ... P0DSN4 32289252
    32484 6qyc:B (2.29) BS15 CA ? GO:0016491 ... P0DSN4 32289252
    32485 6qyc:C (2.29) BS14 CA ? GO:0016491 ... P0DSN4 32289252
    32486 6qyc:C (2.29) BS15 CA ? GO:0016491 ... P0DSN4 32289252
    32487 6qyc:C (2.29) BS16 CA ? GO:0016491 ... P0DSN4 32289252
    32488 6qyh:B (1.94) BS01 CA 1.14.14.9 GO:0004497 ... Q57160 31155821
    32489 6qz1:A (1.7) BS01 CA 3.1.1.102 GO:0009279 ... A0A0K8P8E7 32989159
    32490 6qz2:A (1.9) BS01 CA 3.1.1.102 N/A A0A0K8P8E7 32989159
    32491 6qz2:B (1.9) BS01 CA 3.1.1.102 N/A A0A0K8P8E7 32989159
    32492 6qz2:C (1.9) BS01 CA 3.1.1.102 N/A A0A0K8P8E7 32989159
    32493 6qz2:D (1.9) BS01 CA 3.1.1.102 N/A A0A0K8P8E7 32989159
    32494 6qz2:E (1.9) BS01 CA 3.1.1.102 N/A A0A0K8P8E7 32989159
    32495 6qz2:F (1.9) BS01 CA 3.1.1.102 N/A A0A0K8P8E7 32989159
    32496 6qz2:G (1.9) BS01 CA 3.1.1.102 N/A A0A0K8P8E7 32989159
    32497 6qz2:H (1.9) BS01 CA 3.1.1.102 N/A A0A0K8P8E7 32989159
    32498 6qz2:I (1.9) BS01 CA 3.1.1.102 N/A A0A0K8P8E7 32989159
    32499 6qz2:J (1.9) BS01 CA 3.1.1.102 N/A A0A0K8P8E7 32989159
    32500 6qz3:A (1.6) BS01 CA 3.1.1.102 N/A A0A0K8P8E7 32989159
    32501 6qz4:A (1.8) BS01 CA 3.1.1.102 N/A A0A0K8P8E7 32989159
    32502 6qz4:B (1.8) BS01 CA 3.1.1.102 N/A A0A0K8P8E7 32989159
    32503 6r26:A (3.11) BS02 CA 2.7.13.3 GO:0006355 ... Q7CY45 N/A
    32504 6r2b:A (1.96) BS03 CA 1.2.4.2
    2.2.1.5
    2.3.1.61
    4.1.1.71    		 GO:0016624 ... A0R2B1 31476368
    32505 6r2b:B (1.96) BS04 CA 1.2.4.2
    2.2.1.5
    2.3.1.61
    4.1.1.71    		 GO:0016624 ... A0R2B1 31476368
    32506 6r2b:C (1.96) BS03 CA 1.2.4.2
    2.2.1.5
    2.3.1.61
    4.1.1.71    		 GO:0016624 ... A0R2B1 31476368
    32507 6r2b:D (1.96) BS04 CA 1.2.4.2
    2.2.1.5
    2.3.1.61
    4.1.1.71    		 GO:0016624 ... A0R2B1 31476368
    32508 6r2c:A (2.09) BS03 CA 1.2.4.2
    2.2.1.5
    2.3.1.61
    4.1.1.71    		 GO:0016624 ... A0R2B1 31476368
    32509 6r2c:B (2.09) BS05 CA 1.2.4.2
    2.2.1.5
    2.3.1.61
    4.1.1.71    		 GO:0016624 ... A0R2B1 31476368
    32510 6r2c:C (2.09) BS03 CA 1.2.4.2
    2.2.1.5
    2.3.1.61
    4.1.1.71    		 GO:0016624 ... A0R2B1 31476368
    32511 6r2c:D (2.09) BS05 CA 1.2.4.2
    2.2.1.5
    2.3.1.61
    4.1.1.71    		 GO:0016624 ... A0R2B1 31476368
    32512 6r2d:A (2.3) BS03 CA 1.2.4.2
    2.2.1.5
    2.3.1.61
    4.1.1.71    		 GO:0016624 ... A0R2B1 31476368
    32513 6r2d:B (2.3) BS04 CA 1.2.4.2
    2.2.1.5
    2.3.1.61
    4.1.1.71    		 GO:0016624 ... A0R2B1 31476368
    32514 6r2d:C (2.3) BS03 CA 1.2.4.2
    2.2.1.5
    2.3.1.61
    4.1.1.71    		 GO:0016624 ... A0R2B1 31476368
    32515 6r2d:D (2.3) BS04 CA 1.2.4.2
    2.2.1.5
    2.3.1.61
    4.1.1.71    		 GO:0016624 ... A0R2B1 31476368
    32516 6r2q:B (2.697) BS05 CA ? N/A P0DSN2 32289252
    32517 6r2q:B (2.697) BS06 CA ? N/A P0DSN2 32289252
    32518 6r2q:C (2.697) BS11 CA ? N/A P0DSN4 32289252
    32519 6r2q:C (2.697) BS12 CA ? N/A P0DSN4 32289252
    32520 6r2w:H (1.25) BS01 CA 3.4.21.21 GO:0004252 ... P08709 31801825
    32521 6r2w:L (1.25) BS04 CA 3.4.21.21 GO:0005509 ... P08709 31801825
    32522 6r2w:L (1.25) BS05 CA 3.4.21.21 GO:0005509 ... P08709 31801825
    32523 6r2w:L (1.25) BS06 CA 3.4.21.21 GO:0005509 ... P08709 31801825
    32524 6r2w:L (1.25) BS07 CA 3.4.21.21 GO:0005509 ... P08709 31801825
    32525 6r2w:L (1.25) BS08 CA 3.4.21.21 GO:0005509 ... P08709 31801825
    32526 6r2w:L (1.25) BS09 CA 3.4.21.21 GO:0005509 ... P08709 31801825
    32527 6r2w:L (1.25) BS10 CA 3.4.21.21 GO:0005509 ... P08709 31801825
    32528 6r31:A (2.6) BS04 CA 3.2.1.4 GO:0008810 ... P16218 31794092
    32529 6r31:A (2.6) BS05 CA 3.2.1.4 GO:0008810 ... P16218 31794092
    32530 6r35:A (1.8) BS02 CA ? GO:0030246 ... Q9HYN5 31146126
    32531 6r35:A (1.8) BS03 CA ? GO:0030246 ... Q9HYN5 31146126
    32532 6r35:B (1.8) BS02 CA ? GO:0030246 ... Q9HYN5 31146126
    32533 6r35:B (1.8) BS03 CA ? GO:0030246 ... Q9HYN5 31146126
    32534 6r35:C (1.8) BS02 CA ? GO:0030246 ... Q9HYN5 31146126
    32535 6r35:C (1.8) BS03 CA ? GO:0030246 ... Q9HYN5 31146126
    32536 6r35:D (1.8) BS02 CA ? GO:0030246 ... Q9HYN5 31146126
    32537 6r35:D (1.8) BS03 CA ? GO:0030246 ... Q9HYN5 31146126
    32538 6r3m:A (1.45) BS05 CA 3.2.1.4 GO:0008810 ... P16218 31794092
    32539 6r3m:A (1.45) BS06 CA 3.2.1.4 GO:0008810 ... P16218 31794092
    32540 6r65:A (3.5) BS01 CA ? GO:0005227 ... Q9NW15 31477691
    32541 6r65:A (3.5) BS02 CA ? GO:0005227 ... Q9NW15 31477691
    32542 6r65:A (3.5) BS03 CA ? GO:0005227 ... Q9NW15 31477691
    32543 6r65:B (3.5) BS01 CA ? GO:0005227 ... Q9NW15 31477691
    32544 6r65:B (3.5) BS02 CA ? GO:0005227 ... Q9NW15 31477691
    32545 6r65:B (3.5) BS03 CA ? GO:0005227 ... Q9NW15 31477691
    32546 6r7u:A (1.6) BS01 CA ? GO:0008237 ... G8ULV1 31949901
    32547 6r7u:A (1.6) BS02 CA ? GO:0008237 ... G8ULV1 31949901
    32548 6r7u:B (1.6) BS01 CA ? GO:0008237 ... G8ULV1 31949901
    32549 6r7u:B (1.6) BS02 CA ? GO:0008237 ... G8ULV1 31949901
    32550 6r7v:A (1.4) BS01 CA ? GO:0008237 ... G8ULV1 31949901
    32551 6r7v:A (1.4) BS02 CA ? GO:0008237 ... G8ULV1 31949901
    32552 6r7w:A (1.5) BS02 CA ? GO:0008237 ... G8ULV1 31949901
    32553 6r7w:A (1.5) BS03 CA ? GO:0008237 ... G8ULV1 31949901
    32554 6r7x:A (3.47) BS01 CA ? GO:0005227 ... Q9NW15 31477691
    32555 6r7x:A (3.47) BS02 CA ? GO:0005227 ... Q9NW15 31477691
    32556 6r7x:A (3.47) BS03 CA ? GO:0005227 ... Q9NW15 31477691
    32557 6r7x:B (3.47) BS01 CA ? GO:0005227 ... Q9NW15 31477691
    32558 6r7x:B (3.47) BS02 CA ? GO:0005227 ... Q9NW15 31477691
    32559 6r7x:B (3.47) BS03 CA ? GO:0005227 ... Q9NW15 31477691
    32560 6r7y:A (4.2) BS01 CA ? GO:0005227 ... Q9NW15 31477691
    32561 6r7y:A (4.2) BS02 CA ? GO:0005227 ... Q9NW15 31477691
    32562 6r7y:A (4.2) BS03 CA ? GO:0005227 ... Q9NW15 31477691
    32563 6r7y:B (4.2) BS01 CA ? GO:0005227 ... Q9NW15 31477691
    32564 6r7y:B (4.2) BS02 CA ? GO:0005227 ... Q9NW15 31477691
    32565 6r7y:B (4.2) BS03 CA ? GO:0005227 ... Q9NW15 31477691
    32566 6rb2:A (3.20001) BS01 CA 7.2.2.10 GO:0000166 ... P04191 33229570
    32567 6rb2:A (3.20001) BS02 CA 7.2.2.10 GO:0000166 ... P04191 33229570
    32568 6rb2:A (3.20001) BS04 CA 7.2.2.10 GO:0000166 ... P04191 33229570
    32569 6rbc:A (1.77) BS03 CA 3.4.17.21 GO:0004180 ... Q04609 32097010
    32570 6rbf:A (2.704) BS01 CA ? N/A Q02817 31310764
    32571 6rbf:B (2.704) BS01 CA ? N/A Q02817 31310764
    32572 6rbf:C (2.704) BS01 CA ? N/A Q02817 31310764
    32573 6rbf:D (2.704) BS01 CA ? N/A Q02817 31310764
    32574 6rd0:A (1.9) BS03 CA 3.4.24.65 GO:0004222 ... P39900 31711716
    32575 6rd0:A (1.9) BS04 CA 3.4.24.65 GO:0004222 ... P39900 31711716
    32576 6rd0:A (1.9) BS05 CA 3.4.24.65 GO:0004222 ... P39900 31711716
    32577 6rfk:S (1.6) BS02 CA 3.4.21.22 GO:0004252 ... P00740 N/A
    32578 6rj7:A (1.73002) BS01 CA 3.5.2.6 GO:0008658 ... Q6XEC0 31310409
    32579 6rjb:A (1.15) BS03 CA 2.2.1.1 GO:0000287 ... P29401 31534226
    32580 6rjb:B (1.15) BS04 CA 2.2.1.1 GO:0000287 ... P29401 31534226
    32581 6rjc:A (1.05) BS01 CA 2.2.1.1 GO:0000287 ... P27302 31534226
    32582 6rjc:B (1.05) BS01 CA 2.2.1.1 GO:0000287 ... P27302 31534226
    32583 6rjy:A (1.621) BS03 CA ? GO:0046872 ... B3EYM9 32067952
    32584 6rkh:A (2.471) BS05 CA ? GO:0046872 ... B3EYM9 32067952
    32585 6rkj:A (1.601) BS05 CA ? GO:0046872 ... B3EYM9 32067952
    32586 6rkl:A (2.0) BS05 CA ? GO:0046872 ... B3EYM9 32067952
    32587 6rkx:A (2.094) BS05 CA ? GO:0046872 ... B3EYM9 32067952
    32588 6rkz:A (1.601) BS01 CA 1.7.2.4 GO:0004129 ... P19573 31189605
    32589 6rkz:B (1.601) BS01 CA 1.7.2.4 GO:0004129 ... P19573 31189605
    32590 6rl0:A (1.78) BS01 CA 1.7.2.4 GO:0004129 ... P19573 31189605
    32591 6rl0:B (1.78) BS01 CA 1.7.2.4 GO:0004129 ... P19573 31189605
    32592 6rl0:C (1.78) BS01 CA 1.7.2.4 GO:0004129 ... P19573 31189605
    32593 6rl0:D (1.78) BS01 CA 1.7.2.4 GO:0004129 ... P19573 31189605
    32594 6rl1:A (1.7) BS04 CA ? GO:0046872 ... B3EYM9 32067952
    32595 6rl2:A (1.94) BS05 CA ? GO:0046872 ... B3EYM9 32067952
    32596 6rly:A (2.2) BS03 CA 3.4.24.65 GO:0004222 ... P39900 31711716
    32597 6rly:A (2.2) BS04 CA 3.4.24.65 GO:0004222 ... P39900 31711716
    32598 6rly:A (2.2) BS05 CA 3.4.24.65 GO:0004222 ... P39900 31711716
    32599 6rp6:A (1.885) BS03 CA ? GO:0000122 ... P31947 32501690
    32600 6rti:A (2.2) BS04 CA 3.4.17.21 GO:0004180 ... Q04609 32525981
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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