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BioLiP
Download all results in tab-seperated text for 44457 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    31401 6lja:A (1.978) BS03 CA ? GO:0016829 ... B3C5J6 33627653
    31402 6lja:A (1.978) BS04 CA ? GO:0016829 ... B3C5J6 33627653
    31403 6ljc:C (1.85) BS01 CA ? GO:0051015 ... Q94707 31863323
    31404 6ljc:C (1.85) BS02 CA ? GO:0051015 ... Q94707 31863323
    31405 6ljd:C (2.15) BS01 CA ? GO:0051015 ... Q94707 31863323
    31406 6ljd:C (2.15) BS02 CA ? GO:0051015 ... Q94707 31863323
    31407 6ljd:C (2.15) BS03 CA ? GO:0051015 ... Q94707 31863323
    31408 6lje:A (1.4) BS01 CA ? GO:0051015 ... P06396 31863323
    31409 6lje:B (1.4) BS01 CA ? GO:0051015 ... P06396 31863323
    31410 6ljf:A (1.5) BS01 CA ? GO:0051015 ... P06396 31863323
    31411 6ljf:B (1.5) BS01 CA ? GO:0051015 ... P06396 31863323
    31412 6ljl:A (1.73) BS05 CA ? GO:0016829 ... B3C5J6 33627653
    31413 6ljl:A (1.73) BS06 CA ? GO:0016829 ... B3C5J6 33627653
    31414 6lkc:A (1.998) BS02 CA 1.3.1.9 GO:0000166 ... B8CQB6 33587627
    31415 6lkc:B (1.998) BS02 CA 1.3.1.9 GO:0000166 ... B8CQB6 33587627
    31416 6lkr:A (1.84) BS01 CA ? N/A Q9D8Q7 32139512
    31417 6lkr:B (1.84) BS01 CA ? N/A Q9D8Q7 32139512
    31418 6ll7:A (2.2) BS03 CA 3.6.1.1 GO:0004427 ... L8AXY8 32152422
    31419 6ll7:B (2.2) BS01 CA 3.6.1.1 GO:0004427 ... L8AXY8 32152422
    31420 6ll7:C (2.2) BS03 CA 3.6.1.1 GO:0004427 ... L8AXY8 32152422
    31421 6ll8:A (1.3) BS05 CA 3.6.1.1 GO:0004427 ... L8AXY8 32152422
    31422 6ll8:B (1.3) BS01 CA 3.6.1.1 GO:0004427 ... L8AXY8 32152422
    31423 6lle:A (2.9) BS03 CA 7.2.2.10 GO:0000045 ... P16615 32851169
    31424 6lle:A (2.9) BS04 CA 7.2.2.10 GO:0000045 ... P16615 32851169
    31425 6ln5:A (2.8) BS03 CA 7.2.2.10 GO:0000045 ... P16615 32851169
    31426 6ln5:A (2.8) BS04 CA 7.2.2.10 GO:0000045 ... P16615 32851169
    31427 6ln6:A (2.9) BS03 CA 7.2.2.10 GO:0000045 ... P16615 32851169
    31428 6ln6:A (2.9) BS04 CA 7.2.2.10 GO:0000045 ... P16615 32851169
    31429 6ln7:A (2.8) BS03 CA 7.2.2.10 GO:0000045 ... P16615 32851169
    31430 6ln7:A (2.8) BS04 CA 7.2.2.10 GO:0000045 ... P16615 32851169
    31431 6lp1:A (2.01) BS01 CA 2.8.3.5 GO:0005737 ... Q386P1 32763239
    31432 6lp1:B (2.01) BS01 CA 2.8.3.5 GO:0005737 ... Q386P1 32763239
    31433 6lp1:C (2.01) BS01 CA 2.8.3.5 GO:0005737 ... Q386P1 32763239
    31434 6lp1:D (2.01) BS01 CA 2.8.3.5 GO:0005737 ... Q386P1 32763239
    31435 6lqw:A (2.6) BS02 CA 1.11.1.7 GO:0004601 ... L8ICE9 N/A
    31436 6lqw:B (2.6) BS02 CA 1.11.1.7 GO:0004601 ... L8ICE9 N/A
    31437 6lsm:A (2.751) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 N/A
    31438 6lsm:C (2.751) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 N/A
    31439 6lsn:A (2.445) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 N/A
    31440 6lsn:C (2.445) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 N/A
    31441 6lxi:A (2.5) BS02 CA 3.2.1.18 GO:0004308 ... Q9IGQ6 33024040
    31442 6lxi:A (2.5) BS03 CA 3.2.1.18 GO:0004308 ... Q9IGQ6 33024040
    31443 6lxi:B (2.5) BS02 CA 3.2.1.18 GO:0004308 ... Q9IGQ6 33024040
    31444 6lxi:B (2.5) BS03 CA 3.2.1.18 GO:0004308 ... Q9IGQ6 33024040
    31445 6lxj:A (2.903) BS04 CA 3.2.1.18 GO:0004308 ... A0A024E1X5 33024040
    31446 6lxj:B (2.903) BS05 CA 3.2.1.18 GO:0004308 ... A0A024E1X5 33024040
    31447 6lxj:C (2.903) BS05 CA 3.2.1.18 GO:0004308 ... A0A024E1X5 33024040
    31448 6lxj:D (2.903) BS05 CA 3.2.1.18 GO:0004308 ... A0A024E1X5 33024040
    31449 6lxk:A (3.608) BS01 CA 3.2.1.18 GO:0004308 ... A0A5P1N996 33024040
    31450 6lxk:A (3.608) BS02 CA 3.2.1.18 GO:0004308 ... A0A5P1N996 33024040
    31451 6lxk:B (3.608) BS01 CA 3.2.1.18 GO:0004308 ... A0A5P1N996 33024040
    31452 6lxk:B (3.608) BS02 CA 3.2.1.18 GO:0004308 ... A0A5P1N996 33024040
    31453 6lxk:C (3.608) BS01 CA 3.2.1.18 GO:0004308 ... A0A5P1N996 33024040
    31454 6lxk:C (3.608) BS02 CA 3.2.1.18 GO:0004308 ... A0A5P1N996 33024040
    31455 6lxk:D (3.608) BS01 CA 3.2.1.18 GO:0004308 ... A0A5P1N996 33024040
    31456 6lxk:D (3.608) BS02 CA 3.2.1.18 GO:0004308 ... A0A5P1N996 33024040
    31457 6lxs:A (1.58) BS01 CA ? GO:0005618 ... Q2G0L5 32250096
    31458 6lxv:A (2.1) BS02 CA N/A GO:0003824 ... N/A 35181457
    31459 6lxv:B (2.1) BS03 CA N/A GO:0003824 ... N/A 35181457
    31460 6lxv:C (2.1) BS02 CA N/A GO:0003824 ... N/A 35181457
    31461 6lxv:D (2.1) BS03 CA N/A GO:0003824 ... N/A 35181457
    31462 6lxv:E (2.1) BS02 CA N/A GO:0003824 ... N/A 35181457
    31463 6lxv:F (2.1) BS03 CA N/A GO:0003824 ... N/A 35181457
    31464 6lxv:G (2.1) BS02 CA N/A GO:0003824 ... N/A 35181457
    31465 6lxv:H (2.1) BS03 CA N/A GO:0003824 ... N/A 35181457
    31466 6lxx:A (2.4) BS01 CA ? GO:0005509 ... F6VRB7 N/A
    31467 6lzn:A (1.5) BS02 CA 3.4.24.27 GO:0004222 ... P00800 33310458
    31468 6lzn:A (1.5) BS03 CA 3.4.24.27 GO:0004222 ... P00800 33310458
    31469 6lzn:A (1.5) BS04 CA 3.4.24.27 GO:0004222 ... P00800 33310458
    31470 6lzo:A (1.8) BS01 CA 3.4.24.27 GO:0004222 ... P00800 33310458
    31471 6lzo:A (1.8) BS02 CA 3.4.24.27 GO:0004222 ... P00800 33310458
    31472 6lzq:A (1.8) BS03 CA N/A GO:0043190 ... N/A 34400168
    31473 6lzt:A (1.853) BS02 CA N/A GO:0043190 ... N/A 34400168
    31474 6lzu:A (1.9) BS01 CA N/A GO:0043190 ... N/A 34400168
    31475 6lzu:A (1.9) BS02 CA N/A GO:0043190 ... N/A 34400168
    31476 6lzv:A (2.2) BS01 CA N/A GO:0043190 ... N/A 34400168
    31477 6lzv:A (2.2) BS02 CA N/A GO:0043190 ... N/A 34400168
    31478 6lzw:A (1.9) BS01 CA N/A GO:0043190 ... N/A 34400168
    31479 6m2w:A (3.8) BS02 CA ? GO:0003151 ... P11716 32807966
    31480 6m2w:D (3.8) BS02 CA ? GO:0003151 ... P11716 32807966
    31481 6m2w:G (3.8) BS02 CA ? GO:0003151 ... P11716 32807966
    31482 6m2w:J (3.8) BS02 CA ? GO:0003151 ... P11716 32807966
    31483 6m32:A (2.7) BS16 CA ? GO:0009579 ... Q8KAY0 33214250
    31484 6m32:a (2.7) BS21 CA ? GO:0009579 ... Q8KAY0 33214250
    31485 6m4k:A (1.3) BS01 CA 3.2.1.1 GO:0003824 ... A0A173N065 32876059
    31486 6m4l:A (1.6) BS01 CA 3.2.1.1 GO:0003824 ... A0A173N065 32876059
    31487 6m4m:A (1.7) BS09 CA 3.2.1.1 GO:0003824 ... A0A173N065 32876059
    31488 6m4s:A (1.85) BS01 CA ? GO:0004497 ... M1GMS4 32775708
    31489 6m5a:A (1.85) BS01 CA 3.2.1.187 GO:0005975 ... E8MGH9 32479540
    31490 6m5a:A (1.85) BS02 CA 3.2.1.187 GO:0005975 ... E8MGH9 32479540
    31491 6m5a:A (1.85) BS03 CA 3.2.1.187 GO:0005975 ... E8MGH9 32479540
    31492 6m5m:A (1.7) BS01 CA ? N/A A0A2Z6G7U6 32510468
    31493 6m5m:A (1.7) BS02 CA ? N/A A0A2Z6G7U6 32510468
    31494 6m5m:B (1.7) BS01 CA ? N/A A0A2Z6G7U3 32510468
    31495 6m5m:B (1.7) BS02 CA ? N/A A0A2Z6G7U3 32510468
    31496 6m6p:A (2.27) BS03 CA ? GO:0004553 ... A0A6F9D674 32917756
    31497 6m77:A (1.9) BS01 CA ? GO:0003824 ... A0A125W693 32367553
    31498 6m7e:A (2.42) BS01 CA 1.11.1.7 GO:0004601 ... P80025 N/A
    31499 6m7h:A (1.6) BS04 CA ? GO:0000086 ... P0DP23 31401388
    31500 6m7h:A (1.6) BS05 CA ? GO:0000086 ... P0DP23 31401388
    31501 6m7h:A (1.6) BS06 CA ? GO:0000086 ... P0DP23 31401388
    31502 6m7h:A (1.6) BS07 CA ? GO:0000086 ... P0DP23 31401388
    31503 6m7t:A (2.8) BS04 CA 2.7.7.7 GO:0003684 ... Q9Y253 30275308
    31504 6m8m:A (1.2) BS02 CA N/A N/A N/A 31335890
    31505 6m8m:A (1.2) BS03 CA N/A N/A N/A 31335890
    31506 6m8m:A (1.2) BS04 CA N/A N/A N/A 31335890
    31507 6m8n:A (1.55) BS01 CA ? N/A A0A452CSY7 30282808
    31508 6m8w:A (1.1) BS02 CA 3.4.21.100 GO:0004252 ... P42790 11747435
    31509 6m8y:A (1.1) BS02 CA 3.4.21.100 GO:0004252 ... P42790 11747435
    31510 6m9c:A (1.8) BS02 CA 3.4.21.100 GO:0004252 ... P42790 11747435
    31511 6m9d:A (2.0) BS02 CA 3.4.21.100 GO:0004252 ... P42790 11747435
    31512 6m9f:A (1.3) BS02 CA 3.4.21.100 GO:0004252 ... P42790 11747435
    31513 6mav:A (2.37) BS01 CA 3.4.24.17 GO:0004222 ... P08254 31040180
    31514 6mav:A (2.37) BS02 CA 3.4.24.17 GO:0004222 ... P08254 31040180
    31515 6mav:A (2.37) BS03 CA 3.4.24.17 GO:0004222 ... P08254 31040180
    31516 6mc9:B (3.3) BS01 CA ? GO:0000086 ... P0DP29 30944319
    31517 6mc9:B (3.3) BS02 CA ? GO:0000086 ... P0DP29 30944319
    31518 6mc9:B (3.3) BS03 CA ? GO:0000086 ... P0DP29 30944319
    31519 6mc9:B (3.3) BS04 CA ? GO:0000086 ... P0DP29 30944319
    31520 6mcx:A (2.3) BS01 CA 3.2.1.18 GO:0004308 ... P03472 30713159
    31521 6mds:A (2.5) BS04 CA 3.2.1.96 GO:0004553 ... T1WGN1 30937380
    31522 6mds:B (2.5) BS03 CA 3.2.1.96 GO:0004553 ... T1WGN1 30937380
    31523 6mdv:A (2.5) BS05 CA 3.2.1.96 GO:0004553 ... T1WGN1 30937380
    31524 6mdv:B (2.5) BS04 CA 3.2.1.96 GO:0004553 ... T1WGN1 30937380
    31525 6meq:A (2.9) BS01 CA ? GO:0005509 ... Q9Y5G1 31431536
    31526 6meq:A (2.9) BS02 CA ? GO:0005509 ... Q9Y5G1 31431536
    31527 6meq:A (2.9) BS03 CA ? GO:0005509 ... Q9Y5G1 31431536
    31528 6meq:A (2.9) BS04 CA ? GO:0005509 ... Q9Y5G1 31431536
    31529 6meq:A (2.9) BS05 CA ? GO:0005509 ... Q9Y5G1 31431536
    31530 6meq:A (2.9) BS06 CA ? GO:0005509 ... Q9Y5G1 31431536
    31531 6meq:A (2.9) BS07 CA ? GO:0005509 ... Q9Y5G1 31431536
    31532 6meq:A (2.9) BS08 CA ? GO:0005509 ... Q9Y5G1 31431536
    31533 6meq:A (2.9) BS09 CA ? GO:0005509 ... Q9Y5G1 31431536
    31534 6mer:A (3.0) BS01 CA ? GO:0005509 ... Q9Y5G1 31431536
    31535 6mer:A (3.0) BS02 CA ? GO:0005509 ... Q9Y5G1 31431536
    31536 6mer:A (3.0) BS03 CA ? GO:0005509 ... Q9Y5G1 31431536
    31537 6mer:A (3.0) BS04 CA ? GO:0005509 ... Q9Y5G1 31431536
    31538 6mer:A (3.0) BS05 CA ? GO:0005509 ... Q9Y5G1 31431536
    31539 6mer:A (3.0) BS06 CA ? GO:0005509 ... Q9Y5G1 31431536
    31540 6mer:A (3.0) BS07 CA ? GO:0005509 ... Q9Y5G1 31431536
    31541 6mer:A (3.0) BS08 CA ? GO:0005509 ... Q9Y5G1 31431536
    31542 6mer:A (3.0) BS09 CA ? GO:0005509 ... Q9Y5G1 31431536
    31543 6mf0:A (3.2) BS01 CA ? GO:0005507 ... P00451
    P12263
    31454152
    31544 6mf0:B (3.2) BS01 CA ? GO:0005507 ... P00451
    P12263
    31454152
    31545 6mf2:A (3.60936) BS01 CA ? GO:0005507 ... P00451 31454152
    31546 6mfo:A (3.15) BS01 CA ? GO:0005509 ... Q96QU1 32963095
    31547 6mfo:A (3.15) BS02 CA ? GO:0005509 ... Q96QU1 32963095
    31548 6mfo:A (3.15) BS03 CA ? GO:0005509 ... Q96QU1 32963095
    31549 6mfo:A (3.15) BS04 CA ? GO:0005509 ... Q96QU1 32963095
    31550 6mfo:A (3.15) BS05 CA ? GO:0005509 ... Q96QU1 32963095
    31551 6mga:A (3.15) BS01 CA ? GO:0005509 ... Q08174 31583286
    31552 6mga:A (3.15) BS02 CA ? GO:0005509 ... Q08174 31583286
    31553 6mga:A (3.15) BS03 CA ? GO:0005509 ... Q08174 31583286
    31554 6mga:A (3.15) BS04 CA ? GO:0005509 ... Q08174 31583286
    31555 6mga:A (3.15) BS05 CA ? GO:0005509 ... Q08174 31583286
    31556 6mga:A (3.15) BS06 CA ? GO:0005509 ... Q08174 31583286
    31557 6mga:A (3.15) BS07 CA ? GO:0005509 ... Q08174 31583286
    31558 6mga:A (3.15) BS08 CA ? GO:0005509 ... Q08174 31583286
    31559 6mga:A (3.15) BS09 CA ? GO:0005509 ... Q08174 31583286
    31560 6mh6:A (1.8) BS01 CA 3.4.21.64 GO:0004252 ... P06873 31098022
    31561 6mh6:A (1.8) BS02 CA 3.4.21.64 GO:0004252 ... P06873 31098022
    31562 6mj2:A (6.36) BS01 CA ? GO:0001659 ... O94759 30467180
    31563 6mj2:B (6.36) BS01 CA ? GO:0001659 ... O94759 30467180
    31564 6mj2:C (6.36) BS01 CA ? GO:0001659 ... O94759 30467180
    31565 6mj2:D (6.36) BS01 CA ? GO:0001659 ... O94759 30467180
    31566 6mjp:A (2.85) BS01 CA 3.6.3.- GO:0005524 ... O30650 30894747
    31567 6ml1:A (1.9) BS02 CA 3.4.19.12 GO:0004843 ... Q9Y4E8 30713027
    31568 6ml1:A (1.9) BS03 CA 3.4.19.12 GO:0004843 ... Q9Y4E8 30713027
    31569 6ml1:B (1.9) BS01 CA 3.4.19.12 GO:0004843 ... Q9Y4E8 30713027
    31570 6ml1:B (1.9) BS02 CA 3.4.19.12 GO:0004843 ... Q9Y4E8 30713027
    31571 6mlt:A (1.9) BS01 CA ? GO:0003674 ... Q9KQW0 31439670
    31572 6mlt:A (1.9) BS02 CA ? GO:0003674 ... Q9KQW0 31439670
    31573 6mm2:A (1.04) BS02 CA ? GO:0005524 ... B5II98 N/A
    31574 6mqr:H (2.45) BS02 CA N/A N/A N/A 31348886
    31575 6mqr:L (2.45) BS02 CA N/A N/A N/A 31348886
    31576 6mr7:A (2.144) BS05 CA 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0001701 ... P06746 30649431
    31577 6mr8:A (1.897) BS05 CA 2.7.7.7
    4.2.99.-
    4.2.99.18
    GO:0001701 ... P06746 30649431
    31578 6mrl:A (3.2) BS01 CA ? GO:0005198 ... A8CZ19 31694952
    31579 6mrl:A (3.2) BS02 CA ? GO:0005198 ... A8CZ19 31694952
    31580 6mrl:B (3.2) BS01 CA ? GO:0005198 ... A8CZ19 31694952
    31581 6mrl:B (3.2) BS02 CA ? GO:0005198 ... A8CZ19 31694952
    31582 6mrl:D (3.2) BS01 CA ? GO:0005198 ... A8CZ19 31694952
    31583 6mrl:D (3.2) BS02 CA ? GO:0005198 ... A8CZ19 31694952
    31584 6mrm:A (2.9) BS01 CA ? GO:0003723 ... P22955 31694952
    31585 6mrm:A (2.9) BS02 CA ? GO:0003723 ... P22955 31694952
    31586 6mrm:B (2.9) BS01 CA ? GO:0003723 ... P22955 31694952
    31587 6mrm:B (2.9) BS02 CA ? GO:0003723 ... P22955 31694952
    31588 6mrm:C (2.9) BS01 CA ? GO:0003723 ... P22955 31694952
    31589 6mrm:C (2.9) BS02 CA ? GO:0003723 ... P22955 31694952
    31590 6mro:A (1.6) BS02 CA ? GO:0008168 ... Q8TNZ0 N/A
    31591 6mro:A (1.6) BS03 CA ? GO:0008168 ... Q8TNZ0 N/A
    31592 6mrq:A (1.288) BS01 CA 3.4.21.4 GO:0004175 ... P00760 32787139
    31593 6ms2:A (2.494) BS01 CA ? GO:0004553 ... Q65MB6 30556897
    31594 6ms3:A (1.95) BS01 CA ? GO:0004553 ... Q65MB6 30556897
    31595 6ms3:B (1.95) BS01 CA ? GO:0004553 ... Q65MB6 30556897
    31596 6mud:A (2.69) BS01 CA ? GO:0000086 ... P0DP24 31072926
    31597 6mud:A (2.69) BS02 CA ? GO:0000086 ... P0DP24 31072926
    31598 6mud:A (2.69) BS03 CA ? GO:0000086 ... P0DP24 31072926
    31599 6mud:A (2.69) BS04 CA ? GO:0000086 ... P0DP24 31072926
    31600 6mue:A (1.9) BS02 CA ? GO:0000086 ... P0DP23 31072926

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218