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BioLiP
Download all results in tab-seperated text for 44457 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    31201 6k9a:A (2.3) BS01 CA 2.7.7.-
    2.7.7.7
    3.6.4.12    		 N/A M5AAG8 N/A
    31202 6k9a:A (2.3) BS02 CA 2.7.7.-
    2.7.7.7
    3.6.4.12    		 N/A M5AAG8 N/A
    31203 6k9v:C (2.543) BS02 CA 3.6.5.- GO:0000226 ... P81947 31369682
    31204 6kbj:A (2.2) BS01 CA ? N/A E7E2M2 32112837
    31205 6kbj:A (2.2) BS02 CA ? N/A E7E2M2 32112837
    31206 6kbq:A (2.299) BS01 CA ? N/A E7E2M2 32112837
    31207 6kbq:A (2.299) BS02 CA ? N/A E7E2M2 32112837
    31208 6kc2:A (2.246) BS01 CA ? N/A E7E2M2 32112837
    31209 6kc2:A (2.246) BS02 CA ? N/A E7E2M2 32112837
    31210 6kck:A (2.5) BS04 CA 2.5.1.15
    2.7.6.3    		 GO:0003848 ... Q25704 31883412
    31211 6kck:B (2.5) BS04 CA 2.5.1.15
    2.7.6.3    		 GO:0003848 ... Q25704 31883412
    31212 6kcl:A (2.7) BS04 CA 2.5.1.15
    2.7.6.3    		 GO:0003848 ... Q25704 31883412
    31213 6kcl:B (2.7) BS04 CA 2.5.1.15
    2.7.6.3    		 GO:0003848 ... Q25704 31883412
    31214 6kcm:A (2.3) BS04 CA 2.5.1.15
    2.7.6.3    		 GO:0003848 ... Q25704 31883412
    31215 6kcm:B (2.3) BS04 CA 2.5.1.15
    2.7.6.3    		 GO:0003848 ... Q25704 31883412
    31216 6kcv:A (2.282) BS05 CA ? N/A A0A249T061 31682837
    31217 6kcv:B (2.282) BS05 CA ? N/A A0A249T061 31682837
    31218 6kcv:C (2.282) BS05 CA ? N/A A0A249T061 31682837
    31219 6kcw:A (2.28) BS01 CA ? N/A A0A249T061 31682837
    31220 6kd5:A (2.6) BS01 CA 3.4.21.- GO:0016020 ... Q9BYE2 33820827
    31221 6kde:A (2.999) BS01 CA 1.1.1.41 GO:0000287 ... P50213 31515270
    31222 6kde:C (2.999) BS01 CA 1.1.1.41 GO:0000287 ... P50213 31515270
    31223 6keb:C (3.2) BS01 CA ? GO:0001518 ... A8EVM5 31391290
    31224 6kg9:A (-1.00) BS01 CA ? GO:0000272 ... Q97KK2 33097546
    31225 6kg9:A (-1.00) BS02 CA ? GO:0000272 ... Q97KK2 33097546
    31226 6kgb:A (1.3) BS01 CA ? N/A P02766 32852783
    31227 6kgc:B (1.6) BS01 CA ? GO:0000272 ... Q97KK2 33097546
    31228 6kgc:B (1.6) BS02 CA ? GO:0000272 ... Q97KK2 33097546
    31229 6kgd:B (1.65) BS01 CA ? GO:0000272 ... Q97KK2 33097546
    31230 6kgd:B (1.65) BS02 CA ? GO:0000272 ... Q97KK2 33097546
    31231 6kge:B (2.0) BS01 CA ? GO:0000272 ... Q97KK2 33097546
    31232 6kge:B (2.0) BS02 CA ? GO:0000272 ... Q97KK2 33097546
    31233 6kge:D (2.0) BS01 CA ? GO:0000272 ... Q97KK2 33097546
    31234 6kge:D (2.0) BS02 CA ? GO:0000272 ... Q97KK2 33097546
    31235 6kgf:B (2.3) BS01 CA ? GO:0000272 ... Q97KK2 33097546
    31236 6kgf:B (2.3) BS02 CA ? GO:0000272 ... Q97KK2 33097546
    31237 6kgf:D (2.3) BS01 CA ? GO:0000272 ... Q97KK2 33097546
    31238 6kgf:D (2.3) BS02 CA ? GO:0000272 ... Q97KK2 33097546
    31239 6kjl:A (2.45) BS01 CA 3.2.1.8 GO:0004553 ... Q9RC94 31421720
    31240 6kjl:A (2.45) BS02 CA 3.2.1.8 GO:0004553 ... Q9RC94 31421720
    31241 6kjl:B (2.45) BS01 CA 3.2.1.8 GO:0004553 ... Q9RC94 31421720
    31242 6kjl:B (2.45) BS02 CA 3.2.1.8 GO:0004553 ... Q9RC94 31421720
    31243 6kka:A (2.36) BS01 CA 3.2.1.8 GO:0004553 ... Q9RC94 31421720
    31244 6kka:A (2.36) BS02 CA 3.2.1.8 GO:0004553 ... Q9RC94 31421720
    31245 6kka:A (2.36) BS03 CA 3.2.1.8 GO:0004553 ... Q9RC94 31421720
    31246 6kka:B (2.36) BS01 CA 3.2.1.8 GO:0004553 ... Q9RC94 31421720
    31247 6kka:B (2.36) BS02 CA 3.2.1.8 GO:0004553 ... Q9RC94 31421720
    31248 6kka:B (2.36) BS03 CA 3.2.1.8 GO:0004553 ... Q9RC94 31421720
    31249 6kkf:A (1.4) BS01 CA 3.4.21.64 GO:0004252 ... P06873 N/A
    31250 6kkf:A (1.4) BS02 CA 3.4.21.64 GO:0004252 ... P06873 N/A
    31251 6klo:A (2.8) BS01 CA ? GO:0005576 ... Q46221 32123390
    31252 6klo:A (2.8) BS02 CA ? GO:0005576 ... Q46221 32123390
    31253 6klo:B (2.8) BS01 CA ? GO:0005576 ... Q46221 32123390
    31254 6klo:B (2.8) BS02 CA ? GO:0005576 ... Q46221 32123390
    31255 6klo:C (2.8) BS01 CA ? GO:0005576 ... Q46221 32123390
    31256 6klo:C (2.8) BS02 CA ? GO:0005576 ... Q46221 32123390
    31257 6klo:D (2.8) BS01 CA ? GO:0005576 ... Q46221 32123390
    31258 6klo:D (2.8) BS02 CA ? GO:0005576 ... Q46221 32123390
    31259 6klo:E (2.8) BS01 CA ? GO:0005576 ... Q46221 32123390
    31260 6klo:E (2.8) BS02 CA ? GO:0005576 ... Q46221 32123390
    31261 6klo:F (2.8) BS01 CA ? GO:0005576 ... Q46221 32123390
    31262 6klo:F (2.8) BS02 CA ? GO:0005576 ... Q46221 32123390
    31263 6klo:G (2.8) BS01 CA ? GO:0005576 ... Q46221 32123390
    31264 6klo:G (2.8) BS02 CA ? GO:0005576 ... Q46221 32123390
    31265 6klt:A (12.0) BS01 CA ? GO:0002086 ... P19123 31954841
    31266 6klt:A (12.0) BS02 CA ? GO:0002086 ... P19123 31954841
    31267 6klu:A (12.0) BS01 CA ? GO:0002086 ... P19123 31954841
    31268 6klu:A (12.0) BS02 CA ? GO:0002086 ... P19123 31954841
    31269 6klu:A (12.0) BS03 CA ? GO:0002086 ... P19123 31954841
    31270 6klw:A (2.9) BS01 CA ? GO:0005576 ... Q46221 32123390
    31271 6klw:A (2.9) BS02 CA ? GO:0005576 ... Q46221 32123390
    31272 6klw:B (2.9) BS01 CA ? GO:0005576 ... Q46221 32123390
    31273 6klw:B (2.9) BS02 CA ? GO:0005576 ... Q46221 32123390
    31274 6klw:C (2.9) BS01 CA ? GO:0005576 ... Q46221 32123390
    31275 6klw:C (2.9) BS02 CA ? GO:0005576 ... Q46221 32123390
    31276 6klw:D (2.9) BS01 CA ? GO:0005576 ... Q46221 32123390
    31277 6klw:D (2.9) BS02 CA ? GO:0005576 ... Q46221 32123390
    31278 6klw:E (2.9) BS01 CA ? GO:0005576 ... Q46221 32123390
    31279 6klw:E (2.9) BS02 CA ? GO:0005576 ... Q46221 32123390
    31280 6klw:F (2.9) BS01 CA ? GO:0005576 ... Q46221 32123390
    31281 6klw:F (2.9) BS02 CA ? GO:0005576 ... Q46221 32123390
    31282 6klw:G (2.9) BS01 CA ? GO:0005576 ... Q46221 32123390
    31283 6klw:G (2.9) BS02 CA ? GO:0005576 ... Q46221 32123390
    31284 6klx:A (2.9) BS01 CA ? GO:0005576 ... Q46221 32123390
    31285 6klx:A (2.9) BS02 CA ? GO:0005576 ... Q46221 32123390
    31286 6klx:B (2.9) BS01 CA ? GO:0005576 ... Q46221 32123390
    31287 6klx:B (2.9) BS02 CA ? GO:0005576 ... Q46221 32123390
    31288 6klx:C (2.9) BS01 CA ? GO:0005576 ... Q46221 32123390
    31289 6klx:C (2.9) BS02 CA ? GO:0005576 ... Q46221 32123390
    31290 6klx:D (2.9) BS01 CA ? GO:0005576 ... Q46221 32123390
    31291 6klx:D (2.9) BS02 CA ? GO:0005576 ... Q46221 32123390
    31292 6klx:E (2.9) BS01 CA ? GO:0005576 ... Q46221 32123390
    31293 6klx:E (2.9) BS02 CA ? GO:0005576 ... Q46221 32123390
    31294 6klx:F (2.9) BS01 CA ? GO:0005576 ... Q46221 32123390
    31295 6klx:F (2.9) BS02 CA ? GO:0005576 ... Q46221 32123390
    31296 6klx:G (2.9) BS01 CA ? GO:0005576 ... Q46221 32123390
    31297 6klx:G (2.9) BS02 CA ? GO:0005576 ... Q46221 32123390
    31298 6kmk:A (2.3) BS02 CA 1.11.1.7 GO:0004601 ... P80025 N/A
    31299 6kmw:aL (2.35) BS08 CA 1.97.1.12 GO:0009522 ... A0A1Z3HS05 31932639
    31300 6kmw:bL (2.35) BS08 CA 1.97.1.12 GO:0009522 ... A0A1Z3HS05 31932639
    31301 6kmw:cL (2.35) BS09 CA 1.97.1.12 GO:0009522 ... A0A1Z3HS05 31932639
    31302 6kmx:aL (2.41) BS08 CA 1.97.1.12 GO:0009522 ... A0A1Z3HIQ7 31932639
    31303 6kmx:bL (2.41) BS09 CA 1.97.1.12 GO:0009522 ... A0A1Z3HIQ7 31932639
    31304 6kmx:cL (2.41) BS10 CA 1.97.1.12 GO:0009522 ... A0A1Z3HIQ7 31932639
    31305 6kns:A (2.15) BS01 CA ? GO:0016787 ... E0TYN8 31481231
    31306 6kns:B (2.15) BS01 CA ? GO:0016787 ... E0TYN8 31481231
    31307 6kns:D (2.15) BS01 CA ? GO:0016787 ... E0TYN8 31481231
    31308 6knz:A (2.475) BS02 CA 3.6.5.- GO:0000226 ... P81947 31628188
    31309 6knz:C (2.475) BS02 CA 3.6.5.- GO:0000226 ... P81947 31628188
    31310 6kpp:A (2.74524) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 32085900
    31311 6kpp:C (2.74524) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 32085900
    31312 6kqq:A (1.8) BS07 CA 2.1.1.357 GO:0005634 ... Q96L73 32868895
    31313 6kqu:A (2.0) BS01 CA 3.1.1.4 GO:0004623 ... Q9NZK7 32659444
    31314 6ksi:A (2.08) BS02 CA 3.1.1.3 N/A A0A0U1MWF9 32214208
    31315 6ksi:B (2.08) BS02 CA 3.1.1.3 N/A A0A0U1MWF9 32214208
    31316 6ksl:A (2.59) BS02 CA 3.1.1.3 N/A A0A0U1MWF9 32214208
    31317 6ksl:B (2.59) BS02 CA 3.1.1.3 N/A A0A0U1MWF9 32214208
    31318 6ksm:A (2.23) BS02 CA 3.1.1.3 N/A A0A0U1MWF9 32214208
    31319 6ksm:B (2.23) BS02 CA 3.1.1.3 N/A A0A0U1MWF9 32214208
    31320 6kth:A (1.22) BS01 CA N/A GO:0005509 ... N/A 33249150
    31321 6kvp:A (1.4) BS02 CA ? GO:0003924 ... Q6GHP9 31882782
    31322 6kvq:A (1.6) BS02 CA ? GO:0003924 ... Q6GHP9 31882782
    31323 6kvw:A (2.25) BS02 CA ? GO:0004792 ... B3ECE3 N/A
    31324 6kwz:A (1.551) BS01 CA ? GO:0051015 ... Q94707 31863323
    31325 6kwz:B (1.551) BS01 CA ? GO:0051015 ... Q94707 31863323
    31326 6kxk:D (2.5) BS01 CA ? GO:0005544 ... Q941L3 N/A
    31327 6kxk:F (2.5) BS01 CA ? GO:0005544 ... Q941L3 N/A
    31328 6ky7:A (2.27) BS01 CA 1.11.1.7 GO:0004601 ... P80025 N/A
    31329 6kz8:A (2.291) BS01 CA 3.1.4.4 GO:0003824 ... Q38882 31619765
    31330 6kz8:B (2.291) BS01 CA 3.1.4.4 GO:0003824 ... Q38882 31619765
    31331 6kz9:A (1.801) BS01 CA 3.1.4.4 GO:0003824 ... Q38882 31619765
    31332 6kzk:A (2.789) BS04 CA ? N/A A0A249T061 31682837
    31333 6kzk:B (2.789) BS04 CA ? N/A A0A249T061 31682837
    31334 6kzk:C (2.789) BS04 CA ? N/A A0A249T061 31682837
    31335 6kzp:A (3.1) BS01 CA ? GO:0005216 ... O43497 31766050
    31336 6kzr:A (2.304) BS01 CA ? N/A Q9D8Q7 32139512
    31337 6kzr:B (2.304) BS01 CA ? N/A Q9D8Q7 32139512
    31338 6l1x:A (3.15) BS04 CA 1.7.99.7 GO:0004129 ... C6S880 32431824
    31339 6l2h:A (2.096) BS01 CA 2.4.1.19 GO:0004556 ... P04830 N/A
    31340 6l2h:A (2.096) BS02 CA 2.4.1.19 GO:0004556 ... P04830 N/A
    31341 6l2j:A (1.933) BS07 CA 1.11.1.7 GO:0004601 ... P80025 N/A
    31342 6l2j:A (1.933) BS08 CA 1.11.1.7 GO:0004601 ... P80025 N/A
    31343 6l2j:A (1.933) BS09 CA 1.11.1.7 GO:0004601 ... P80025 N/A
    31344 6l2j:A (1.933) BS10 CA 1.11.1.7 GO:0004601 ... P80025 N/A
    31345 6l2j:A (1.933) BS11 CA 1.11.1.7 GO:0004601 ... P80025 N/A
    31346 6l32:A (2.3) BS01 CA 1.11.1.7 GO:0004601 ... L8ICE9 33427997
    31347 6l3h:A (3.06) BS04 CA 1.7.99.7 GO:0004129 ... C6S880 32431824
    31348 6l3h:B (3.06) BS04 CA 1.7.99.7 GO:0004129 ... C6S880 32431824
    31349 6l3u:A (2.53) BS01 CA ? GO:0005243 ... Q8NFK1 32923625
    31350 6l3u:A (2.53) BS02 CA ? GO:0005243 ... Q8NFK1 32923625
    31351 6l3u:B (2.53) BS01 CA ? GO:0005243 ... Q8NFK1 32923625
    31352 6l3u:B (2.53) BS02 CA ? GO:0005243 ... Q8NFK1 32923625
    31353 6l3u:C (2.53) BS01 CA ? GO:0005243 ... Q8NFK1 32923625
    31354 6l3u:C (2.53) BS02 CA ? GO:0005243 ... Q8NFK1 32923625
    31355 6l3u:D (2.53) BS01 CA ? GO:0005243 ... Q8NFK1 32923625
    31356 6l3u:D (2.53) BS02 CA ? GO:0005243 ... Q8NFK1 32923625
    31357 6l3u:E (2.53) BS01 CA ? GO:0005243 ... Q8NFK1 32923625
    31358 6l3u:E (2.53) BS02 CA ? GO:0005243 ... Q8NFK1 32923625
    31359 6l3u:F (2.53) BS01 CA ? GO:0005243 ... Q8NFK1 32923625
    31360 6l3u:F (2.53) BS02 CA ? GO:0005243 ... Q8NFK1 32923625
    31361 6l5g:A (2.5) BS01 CA 1.11.1.7 GO:0004601 ... P80025 33427997
    31362 6l84:A (2.602) BS03 CA 2.7.7.7 GO:0000287 ... Q97W02 31971182
    31363 6l84:A (2.602) BS04 CA 2.7.7.7 GO:0000287 ... Q97W02 31971182
    31364 6l84:A (2.602) BS05 CA 2.7.7.7 GO:0000287 ... Q97W02 31971182
    31365 6l9t:A (1.89) BS01 CA 1.11.1.7 GO:0004601 ... P80025 N/A
    31366 6l9z:N (2.5) BS03 CA ? GO:0000786 ... P06899 33590100
    31367 6la9:H (3.7) BS03 CA ? GO:0000786 ... P06899 32958761
    31368 6lb7:A (2.101) BS01 CA ? GO:0005509 ... Q9BPX6 32790952
    31369 6lb7:B (2.101) BS01 CA ? GO:0005509 ... Q8IYU8 32790952
    31370 6lco:A (1.995) BS02 CA 1.11.1.7 GO:0004601 ... P80025 N/A
    31371 6leh:A (2.0) BS04 CA 3.1.4.39 GO:0003676 ... Q9R1E6 32134652
    31372 6lf7:A (1.794) BS02 CA 1.11.1.7 GO:0004601 ... A0A452E9Y6 N/A
    31373 6lfj:A (1.84) BS01 CA ? N/A Q9D8Q7 32139512
    31374 6lfj:B (1.84) BS01 CA ? N/A Q9D8Q7 32139512
    31375 6lga:A (1.85) BS02 CA 3.2.1.20 GO:0005975 ... A0A077JI83 32381508
    31376 6lga:B (1.85) BS02 CA 3.2.1.20 GO:0005975 ... A0A077JI83 32381508
    31377 6lgb:A (1.7) BS02 CA 3.2.1.20 GO:0005975 ... A0A077JI83 32381508
    31378 6lgb:B (1.7) BS02 CA 3.2.1.20 GO:0005975 ... A0A077JI83 32381508
    31379 6lgc:A (1.9) BS02 CA 3.2.1.20 GO:0005975 ... A0A077JI83 32381508
    31380 6lgc:B (1.9) BS02 CA 3.2.1.20 GO:0005975 ... A0A077JI83 32381508
    31381 6lgd:A (1.75) BS02 CA 3.2.1.20 GO:0005975 ... A0A077JI83 32381508
    31382 6lgd:B (1.75) BS02 CA 3.2.1.20 GO:0005975 ... A0A077JI83 32381508
    31383 6lge:A (1.75) BS05 CA 3.2.1.20 GO:0005975 ... A0A077JI83 32381508
    31384 6lge:B (1.75) BS05 CA 3.2.1.20 GO:0005975 ... A0A077JI83 32381508
    31385 6lgf:A (1.85) BS04 CA 3.2.1.20 GO:0005975 ... A0A077JI83 32381508
    31386 6lgf:B (1.85) BS04 CA 3.2.1.20 GO:0005975 ... A0A077JI83 32381508
    31387 6lgg:A (1.84) BS04 CA 3.2.1.20 GO:0005975 ... A0A077JI83 32381508
    31388 6lgg:B (1.84) BS04 CA 3.2.1.20 GO:0005975 ... A0A077JI83 32381508
    31389 6lgh:A (1.7) BS02 CA 3.2.1.20 GO:0005975 ... A0A077JI83 32381508
    31390 6lgh:B (1.7) BS02 CA 3.2.1.20 GO:0005975 ... A0A077JI83 32381508
    31391 6lgi:A (1.6) BS02 CA 3.2.1.20 GO:0005975 ... A0A077JI83 32381508
    31392 6lgi:B (1.6) BS02 CA 3.2.1.20 GO:0005975 ... A0A077JI83 32381508
    31393 6li7:A (2.098) BS01 CA ? N/A E7E2M2 32112837
    31394 6li7:A (2.098) BS02 CA ? N/A E7E2M2 32112837
    31395 6li9:A (2.3) BS01 CA ? GO:0005515 ... Q07837 32494597
    31396 6li9:C (2.3) BS01 CA ? GO:0005515 ... Q07837 32494597
    31397 6lid:A (2.7) BS01 CA ? GO:0005515 ... Q07837 32494597
    31398 6lid:C (2.7) BS01 CA ? GO:0005515 ... Q07837 32494597
    31399 6lik:A (2.4) BS01 CA ? N/A E7E2M2 32112837
    31400 6lik:A (2.4) BS02 CA ? N/A E7E2M2 32112837
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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