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BioLiP
Download all results in tab-seperated text for 44457 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    30601 6i02:A (2.45) BS06 CA 5.1.3.17 GO:0015012 ... O94923 30872481
    30602 6i02:B (2.45) BS05 CA 5.1.3.17 GO:0015012 ... O94923 30872481
    30603 6i1q:A (1.99) BS01 CA ? N/A A0A024S820 31604773
    30604 6i1t:A (1.8) BS01 CA ? N/A A0A024S820 31604773
    30605 6i1t:A (1.8) BS02 CA ? N/A A0A024S820 31604773
    30606 6i28:A (1.65) BS01 CA ? GO:0004721 ... Q91EV7 30950823
    30607 6i2q:A (2.15) BS03 CA 1.2.4.2
    2.2.1.5
    2.3.1.61
    4.1.1.71    		 GO:0016624 ... A0R2B1 31064884
    30608 6i2r:A (2.2) BS03 CA 1.2.4.2
    2.2.1.5
    2.3.1.61
    4.1.1.71    		 GO:0016624 ... A0R2B1 31064884
    30609 6i2r:C (2.2) BS04 CA 1.2.4.2
    2.2.1.5
    2.3.1.61
    4.1.1.71    		 GO:0016624 ... A0R2B1 31064884
    30610 6i2s:A (2.4) BS02 CA 1.2.4.2
    2.2.1.5
    2.3.1.61
    4.1.1.71    		 GO:0016624 ... A0R2B1 31064884
    30611 6i4d:G (1.24) BS01 CA ? GO:0051015 ... P13020 31199804
    30612 6i4d:G (1.24) BS02 CA ? GO:0051015 ... P13020 31199804
    30613 6i4e:A (1.22) BS02 CA 3.6.4.- GO:0005200 ... Q8I4X0 31199804
    30614 6i4e:G (1.22) BS01 CA ? GO:0051015 ... P13020 31199804
    30615 6i4e:G (1.22) BS02 CA ? GO:0051015 ... P13020 31199804
    30616 6i4f:G (1.5) BS01 CA ? GO:0051015 ... P13020 31199804
    30617 6i4f:G (1.5) BS02 CA ? GO:0051015 ... P13020 31199804
    30618 6i4g:G (2.0) BS01 CA ? GO:0051015 ... P13020 31199804
    30619 6i4g:G (2.0) BS02 CA ? GO:0051015 ... P13020 31199804
    30620 6i4g:H (2.0) BS01 CA ? GO:0051015 ... P13020 31199804
    30621 6i4g:H (2.0) BS02 CA ? GO:0051015 ... P13020 31199804
    30622 6i4h:G (1.4) BS01 CA ? GO:0051015 ... P13020 31199804
    30623 6i4h:G (1.4) BS02 CA ? GO:0051015 ... P13020 31199804
    30624 6i4i:G (1.9) BS01 CA ? GO:0051015 ... P13020 31199804
    30625 6i4i:G (1.9) BS02 CA ? GO:0051015 ... P13020 31199804
    30626 6i4j:G (1.5) BS01 CA ? GO:0051015 ... P13020 31199804
    30627 6i4j:G (1.5) BS02 CA ? GO:0051015 ... P13020 31199804
    30628 6i4k:G (1.83) BS01 CA ? GO:0051015 ... P13020 31199804
    30629 6i4k:G (1.83) BS02 CA ? GO:0051015 ... P13020 31199804
    30630 6i4l:G (1.83) BS01 CA ? GO:0051015 ... P13020 31199804
    30631 6i4l:G (1.83) BS02 CA ? GO:0051015 ... P13020 31199804
    30632 6i4m:G (1.873) BS01 CA ? GO:0051015 ... P13020 31199804
    30633 6i4m:G (1.873) BS02 CA ? GO:0051015 ... P13020 31199804
    30634 6i5c:A (2.95) BS02 CA 3.6.5.- GO:0000226 ... P81947 31098019
    30635 6i5c:C (2.95) BS03 CA 3.6.5.- GO:0000226 ... P81947 31098019
    30636 6i7s:A (2.5) BS01 CA 5.3.4.1 GO:0003723 ... P07237 31395737
    30637 6i7s:B (2.5) BS01 CA 5.3.4.1 GO:0003723 ... P07237 31395737
    30638 6i8a:A (2.652) BS04 CA 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P21951 30670696
    30639 6i8a:A (2.652) BS05 CA 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P21951 30670696
    30640 6i8a:B (2.652) BS06 CA 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P21951 30670696
    30641 6i8a:B (2.652) BS07 CA 2.7.7.7
    3.1.11.-    		 GO:0000166 ... P21951 30670696
    30642 6i8v:A (1.991) BS02 CA ? GO:0005886 ... P39760 30753894
    30643 6i9a:A (1.2) BS01 CA 3.4.22.47 GO:0006508 ... Q51817 30894633
    30644 6i9a:A (1.2) BS02 CA 3.4.22.47 GO:0006508 ... Q51817 30894633
    30645 6i9a:B (1.2) BS01 CA 3.4.22.47 GO:0006508 ... Q51817 30894633
    30646 6i9a:B (1.2) BS02 CA 3.4.22.47 GO:0006508 ... Q51817 30894633
    30647 6ial:C (1.45) BS01 CA ? GO:0005576 ... P32890 30736336
    30648 6iav:A (2.0) BS02 CA ? GO:0005507 ... P00282 N/A
    30649 6iav:A (2.0) BS03 CA ? GO:0005507 ... P00282 N/A
    30650 6iav:B (2.0) BS02 CA ? GO:0005507 ... P00282 N/A
    30651 6iav:C (2.0) BS02 CA ? GO:0005507 ... P00282 N/A
    30652 6ibs:A (1.37) BS04 CA 3.5.2.6 N/A C7C422 30996812
    30653 6ibs:A (1.37) BS05 CA 3.5.2.6 N/A C7C422 30996812
    30654 6ibs:B (1.37) BS04 CA 3.5.2.6 N/A C7C422 30996812
    30655 6ibs:B (1.37) BS05 CA 3.5.2.6 N/A C7C422 30996812
    30656 6ibv:A (1.4) BS04 CA 3.5.2.6 N/A C7C422 30996812
    30657 6ibv:A (1.4) BS05 CA 3.5.2.6 N/A C7C422 30996812
    30658 6ibv:B (1.4) BS01 CA 3.5.2.6 N/A C7C422 30996812
    30659 6idn:A (1.5) BS01 CA 3.2.1.14 GO:0004553 ... A0A493R6X2 31790908
    30660 6idy:A (2.15) BS01 CA ? GO:0003674 ... Q4WG73 N/A
    30661 6idy:B (2.15) BS01 CA ? GO:0003674 ... Q4WG73 N/A
    30662 6idy:C (2.15) BS01 CA ? GO:0003674 ... Q4WG73 N/A
    30663 6iej:A (2.206) BS01 CA 3.1.1.4
    3.1.1.5    		 GO:0005509 ... P49147 31050338
    30664 6iej:A (2.206) BS02 CA 3.1.1.4
    3.1.1.5    		 GO:0005509 ... P49147 31050338
    30665 6iej:B (2.206) BS02 CA 3.1.1.4
    3.1.1.5    		 GO:0005509 ... P49147 31050338
    30666 6iej:B (2.206) BS03 CA 3.1.1.4
    3.1.1.5    		 GO:0005509 ... P49147 31050338
    30667 6iej:B (2.206) BS04 CA 3.1.1.4
    3.1.1.5    		 GO:0005509 ... P49147 31050338
    30668 6iej:C (2.206) BS01 CA 3.1.1.4
    3.1.1.5    		 GO:0005509 ... P49147 31050338
    30669 6iej:C (2.206) BS02 CA 3.1.1.4
    3.1.1.5    		 GO:0005509 ... P49147 31050338
    30670 6iej:C (2.206) BS03 CA 3.1.1.4
    3.1.1.5    		 GO:0005509 ... P49147 31050338
    30671 6ifc:A (1.99) BS02 CA 3.1.-.- GO:0000287 ... Q8ZM86 31908032
    30672 6ifc:C (1.99) BS02 CA 3.1.-.- GO:0000287 ... Q8ZM86 31908032
    30673 6ifc:E (1.99) BS02 CA 3.1.-.- GO:0000287 ... Q8ZM86 31908032
    30674 6ifc:G (1.99) BS02 CA 3.1.-.- GO:0000287 ... Q8ZM86 31908032
    30675 6ifq:A (1.95) BS01 CA 3.1.4.52 GO:0000166 ... A0A0H3AJ04 31647518
    30676 6ifq:B (1.95) BS01 CA 3.1.4.52 GO:0000166 ... A0A0H3AJ04 31647518
    30677 6ig7:A (1.8) BS02 CA 3.4.24.27 GO:0004222 ... P00800 30792457
    30678 6ig7:A (1.8) BS03 CA 3.4.24.27 GO:0004222 ... P00800 30792457
    30679 6ig7:A (1.8) BS04 CA 3.4.24.27 GO:0004222 ... P00800 30792457
    30680 6ig7:A (1.8) BS05 CA 3.4.24.27 GO:0004222 ... P00800 30792457
    30681 6ih1:A (1.95) BS02 CA 3.1.4.52 GO:0000166 ... A0A0H3AJ04 31647518
    30682 6ih1:A (1.95) BS03 CA 3.1.4.52 GO:0000166 ... A0A0H3AJ04 31647518
    30683 6ih1:B (1.95) BS02 CA 3.1.4.52 GO:0000166 ... A0A0H3AJ04 31647518
    30684 6ih1:B (1.95) BS03 CA 3.1.4.52 GO:0000166 ... A0A0H3AJ04 31647518
    30685 6ih1:C (1.95) BS02 CA 3.1.4.52 GO:0000166 ... A0A0H3AJ04 31647518
    30686 6ih1:C (1.95) BS03 CA 3.1.4.52 GO:0000166 ... A0A0H3AJ04 31647518
    30687 6ih1:D (1.95) BS02 CA 3.1.4.52 GO:0000166 ... A0A0H3AJ04 31647518
    30688 6ih1:D (1.95) BS03 CA 3.1.4.52 GO:0000166 ... A0A0H3AJ04 31647518
    30689 6ih7:A (2.25) BS02 CA 3.1.4.52 GO:0000166 ... A0A0H3AJ04 31647518
    30690 6ih7:A (2.25) BS03 CA 3.1.4.52 GO:0000166 ... A0A0H3AJ04 31647518
    30691 6ih7:B (2.25) BS02 CA 3.1.4.52 GO:0000166 ... A0A0H3AJ04 31647518
    30692 6ih7:B (2.25) BS03 CA 3.1.4.52 GO:0000166 ... A0A0H3AJ04 31647518
    30693 6iie:A (2.142) BS01 CA 2.7.1.107
    2.7.1.93    		 GO:0005509 ... P23743 30653270
    30694 6iie:A (2.142) BS02 CA 2.7.1.107
    2.7.1.93    		 GO:0005509 ... P23743 30653270
    30695 6iih:A (1.958) BS01 CA 3.2.1.17 GO:0003796 ... P00720
    Q8IYU8    		 31397067
    30696 6iih:B (1.958) BS01 CA 3.2.1.17 GO:0003796 ... P00720
    Q8IYU8    		 31397067
    30697 6iih:B (1.958) BS02 CA 3.2.1.17 GO:0003796 ... P00720
    Q8IYU8    		 31397067
    30698 6ij2:A (1.7) BS02 CA ? GO:0000166 ... A0A0H3AJ04 31647518
    30699 6ij2:A (1.7) BS03 CA ? GO:0000166 ... A0A0H3AJ04 31647518
    30700 6ij2:A (1.7) BS04 CA ? GO:0000166 ... A0A0H3AJ04 31647518
    30701 6ij2:A (1.7) BS05 CA ? GO:0000166 ... A0A0H3AJ04 31647518
    30702 6ij2:B (1.7) BS02 CA ? GO:0000166 ... A0A0H3AJ04 31647518
    30703 6ij2:B (1.7) BS03 CA ? GO:0000166 ... A0A0H3AJ04 31647518
    30704 6ij2:B (1.7) BS04 CA ? GO:0000166 ... A0A0H3AJ04 31647518
    30705 6ij2:B (1.7) BS05 CA ? GO:0000166 ... A0A0H3AJ04 31647518
    30706 6ij2:C (1.7) BS02 CA ? GO:0000166 ... A0A0H3AJ04 31647518
    30707 6ij2:C (1.7) BS03 CA ? GO:0000166 ... A0A0H3AJ04 31647518
    30708 6ij2:C (1.7) BS04 CA ? GO:0000166 ... A0A0H3AJ04 31647518
    30709 6ij2:C (1.7) BS05 CA ? GO:0000166 ... A0A0H3AJ04 31647518
    30710 6ij2:D (1.7) BS02 CA ? GO:0000166 ... A0A0H3AJ04 31647518
    30711 6ij2:D (1.7) BS03 CA ? GO:0000166 ... A0A0H3AJ04 31647518
    30712 6ij2:D (1.7) BS04 CA ? GO:0000166 ... A0A0H3AJ04 31647518
    30713 6ij2:D (1.7) BS05 CA ? GO:0000166 ... A0A0H3AJ04 31647518
    30714 6im0:A (2.6) BS03 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30715 6im0:A (2.6) BS04 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30716 6im0:A (2.6) BS05 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30717 6im0:A (2.6) BS06 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30718 6im0:B (2.6) BS03 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30719 6im0:B (2.6) BS04 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30720 6im0:B (2.6) BS05 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30721 6im0:B (2.6) BS06 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30722 6im0:C (2.6) BS01 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30723 6im0:C (2.6) BS02 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30724 6im0:C (2.6) BS03 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30725 6im0:C (2.6) BS04 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30726 6im0:D (2.6) BS03 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30727 6im0:D (2.6) BS04 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30728 6im0:D (2.6) BS05 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30729 6im0:F (2.6) BS03 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30730 6im0:F (2.6) BS04 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30731 6im1:A (2.0) BS02 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30732 6im1:A (2.0) BS03 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30733 6im1:A (2.0) BS04 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30734 6im1:B (2.0) BS02 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30735 6im1:B (2.0) BS03 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30736 6im1:B (2.0) BS04 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30737 6im1:D (2.0) BS02 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30738 6im1:D (2.0) BS03 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30739 6im1:E (2.0) BS01 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30740 6im1:E (2.0) BS02 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30741 6im1:E (2.0) BS03 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30742 6im1:F (2.0) BS01 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30743 6im1:F (2.0) BS02 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30744 6im1:F (2.0) BS03 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30745 6im3:A (2.0) BS03 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30746 6im3:A (2.0) BS04 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30747 6im3:A (2.0) BS05 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30748 6im3:A (2.0) BS06 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30749 6im3:B (2.0) BS03 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30750 6im3:B (2.0) BS04 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30751 6im3:B (2.0) BS05 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30752 6im3:B (2.0) BS06 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30753 6im3:D (2.0) BS03 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30754 6im3:D (2.0) BS04 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30755 6im3:E (2.0) BS01 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30756 6im3:E (2.0) BS02 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30757 6im3:F (2.0) BS01 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30758 6im3:F (2.0) BS02 CA 4.2.1.1 GO:0004089 ... C0QRB5 31250619
    30759 6im7:A (1.97) BS01 CA 1.16.3.4 GO:0004322 ... P36649 30770473
    30760 6int:A (1.942) BS01 CA 5.3.1.5 GO:0000287 ... A0A4V8H014 30602271
    30761 6int:A (1.942) BS02 CA 5.3.1.5 GO:0000287 ... A0A4V8H014 30602271
    30762 6int:A (1.942) BS03 CA 5.3.1.5 GO:0000287 ... A0A4V8H014 30602271
    30763 6int:B (1.942) BS01 CA 5.3.1.5 GO:0000287 ... A0A4V8H014 30602271
    30764 6int:B (1.942) BS02 CA 5.3.1.5 GO:0000287 ... A0A4V8H014 30602271
    30765 6int:B (1.942) BS03 CA 5.3.1.5 GO:0000287 ... A0A4V8H014 30602271
    30766 6int:C (1.942) BS01 CA 5.3.1.5 GO:0000287 ... A0A4V8H014 30602271
    30767 6int:C (1.942) BS02 CA 5.3.1.5 GO:0000287 ... A0A4V8H014 30602271
    30768 6int:C (1.942) BS03 CA 5.3.1.5 GO:0000287 ... A0A4V8H014 30602271
    30769 6int:D (1.942) BS01 CA 5.3.1.5 GO:0000287 ... A0A4V8H014 30602271
    30770 6int:D (1.942) BS02 CA 5.3.1.5 GO:0000287 ... A0A4V8H014 30602271
    30771 6int:D (1.942) BS03 CA 5.3.1.5 GO:0000287 ... A0A4V8H014 30602271
    30772 6int:E (1.942) BS01 CA 5.3.1.5 GO:0000287 ... A0A4V8H014 30602271
    30773 6int:E (1.942) BS02 CA 5.3.1.5 GO:0000287 ... A0A4V8H014 30602271
    30774 6int:E (1.942) BS03 CA 5.3.1.5 GO:0000287 ... A0A4V8H014 30602271
    30775 6int:F (1.942) BS01 CA 5.3.1.5 GO:0000287 ... A0A4V8H014 30602271
    30776 6int:F (1.942) BS02 CA 5.3.1.5 GO:0000287 ... A0A4V8H014 30602271
    30777 6int:F (1.942) BS03 CA 5.3.1.5 GO:0000287 ... A0A4V8H014 30602271
    30778 6int:G (1.942) BS01 CA 5.3.1.5 GO:0000287 ... A0A4V8H014 30602271
    30779 6int:G (1.942) BS02 CA 5.3.1.5 GO:0000287 ... A0A4V8H014 30602271
    30780 6int:G (1.942) BS03 CA 5.3.1.5 GO:0000287 ... A0A4V8H014 30602271
    30781 6int:H (1.942) BS01 CA 5.3.1.5 GO:0000287 ... A0A4V8H014 30602271
    30782 6int:H (1.942) BS02 CA 5.3.1.5 GO:0000287 ... A0A4V8H014 30602271
    30783 6int:H (1.942) BS03 CA 5.3.1.5 GO:0000287 ... A0A4V8H014 30602271
    30784 6inz:A (2.289) BS06 CA ? GO:0046872 ... D1AWE0 31204616
    30785 6iop:A (2.3) BS01 CA ? N/A Q9KQ43 30745373
    30786 6iop:B (2.3) BS02 CA ? N/A Q9KQ43 30745373
    30787 6ioq:A (2.143) BS02 CA ? N/A Q9KQ43 30745373
    30788 6ior:A (2.5) BS02 CA ? N/A Q9KQ43 30745373
    30789 6ior:B (2.5) BS02 CA ? N/A Q9KQ43 30745373
    30790 6ior:C (2.5) BS02 CA ? N/A Q9KQ43 30745373
    30791 6ior:D (2.5) BS02 CA ? N/A Q9KQ43 30745373
    30792 6ios:A (2.35) BS02 CA ? N/A Q9KQ43 30745373
    30793 6iot:A (2.7) BS02 CA ? N/A Q9KQ43 30745373
    30794 6iot:B (2.7) BS02 CA ? N/A Q9KQ43 30745373
    30795 6iot:C (2.7) BS02 CA ? N/A Q9KQ43 30745373
    30796 6iot:D (2.7) BS02 CA ? N/A Q9KQ43 30745373
    30797 6iou:A (2.1) BS02 CA ? N/A Q9KQ43 30745373
    30798 6iou:B (2.1) BS02 CA ? N/A Q9KQ43 30745373
    30799 6ioz:A (3.1) BS01 CA 3.1.6.13 GO:0004423 ... P22304 N/A
    30800 6iqq:C (2.8) BS01 CA 3.4.21.102 GO:0006508 ... P23865 31387902
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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