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BioLiP
Download all results in tab-seperated text for 44457 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    29201 6bcf:A (2.92) BS04 CA ? GO:0004519 ... C7SWF3 30357419
    29202 6bcf:A (2.92) BS05 CA ? GO:0004519 ... C7SWF3 30357419
    29203 6bcf:D (2.92) BS03 CA ? GO:0004519 ... C7SWF3 30357419
    29204 6bcf:D (2.92) BS04 CA ? GO:0004519 ... C7SWF3 30357419
    29205 6bcf:D (2.92) BS05 CA ? GO:0004519 ... C7SWF3 30357419
    29206 6bcf:G (2.92) BS03 CA ? GO:0004519 ... C7SWF3 30357419
    29207 6bcf:G (2.92) BS04 CA ? GO:0004519 ... C7SWF3 30357419
    29208 6bcf:G (2.92) BS05 CA ? GO:0004519 ... C7SWF3 30357419
    29209 6bcf:J (2.92) BS03 CA ? GO:0004519 ... C7SWF3 30357419
    29210 6bcf:J (2.92) BS04 CA ? GO:0004519 ... C7SWF3 30357419
    29211 6bcg:A (2.9) BS03 CA ? GO:0004519 ... C7SWF3 30357419
    29212 6bcg:D (2.9) BS03 CA ? GO:0004519 ... C7SWF3 30357419
    29213 6bcg:G (2.9) BS03 CA ? GO:0004519 ... C7SWF3 30357419
    29214 6bcg:J (2.9) BS03 CA ? GO:0004519 ... C7SWF3 30357419
    29215 6bci:A (2.28) BS03 CA ? GO:0004519 ... C7SWF3 30357419
    29216 6bci:A (2.28) BS04 CA ? GO:0004519 ... C7SWF3 30357419
    29217 6bci:A (2.28) BS05 CA ? GO:0004519 ... C7SWF3 30357419
    29218 6bcn:A (2.5) BS03 CA ? GO:0004519 ... C7SWF3 30357419
    29219 6bcn:A (2.5) BS04 CA ? GO:0004519 ... C7SWF3 30357419
    29220 6bcn:A (2.5) BS05 CA ? GO:0004519 ... C7SWF3 30357419
    29221 6bcn:C (2.5) BS03 CA ? GO:0004519 ... C7SWF3 30357419
    29222 6bcn:C (2.5) BS04 CA ? GO:0004519 ... C7SWF3 30357419
    29223 6bcn:C (2.5) BS05 CA ? GO:0004519 ... C7SWF3 30357419
    29224 6bcn:G (2.5) BS03 CA ? GO:0004519 ... C7SWF3 30357419
    29225 6bcn:G (2.5) BS04 CA ? GO:0004519 ... C7SWF3 30357419
    29226 6bcn:J (2.5) BS03 CA ? GO:0004519 ... C7SWF3 30357419
    29227 6bcn:J (2.5) BS04 CA ? GO:0004519 ... C7SWF3 30357419
    29228 6bcn:J (2.5) BS05 CA ? GO:0004519 ... C7SWF3 30357419
    29229 6bct:A (2.73) BS03 CA ? GO:0004519 ... C7SWF3 30357419
    29230 6bct:A (2.73) BS04 CA ? GO:0004519 ... C7SWF3 30357419
    29231 6bct:A (2.73) BS05 CA ? GO:0004519 ... C7SWF3 30357419
    29232 6bd0:A (1.45) BS03 CA ? GO:0004519 ... Q4VWW5 N/A
    29233 6bd0:A (1.45) BS04 CA ? GO:0004519 ... Q4VWW5 N/A
    29234 6bdt:A (2.3) BS01 CA 3.4.22.54 GO:0004198 ... P20807 29382717
    29235 6bdt:A (2.3) BS02 CA 3.4.22.54 GO:0004198 ... P20807 29382717
    29236 6bdt:B (2.3) BS01 CA 3.4.22.54 GO:0004198 ... P20807 29382717
    29237 6bdt:B (2.3) BS02 CA 3.4.22.54 GO:0004198 ... P20807 29382717
    29238 6bdt:C (2.3) BS01 CA 3.4.22.54 GO:0004198 ... P20807 29382717
    29239 6bdt:C (2.3) BS02 CA 3.4.22.54 GO:0004198 ... P20807 29382717
    29240 6bdt:D (2.3) BS01 CA 3.4.22.54 GO:0004198 ... P20807 29382717
    29241 6bdt:D (2.3) BS02 CA 3.4.22.54 GO:0004198 ... P20807 29382717
    29242 6bdz:A (3.1) BS01 CA 3.4.24.81 GO:0004222 ... O14672 29224781
    29243 6be6:A (2.8) BS02 CA 3.4.24.81 GO:0004222 ... O14672 29224781
    29244 6be6:B (2.8) BS03 CA 3.4.24.81 GO:0004222 ... O14672 29224781
    29245 6be6:C (2.8) BS02 CA 3.4.24.81 GO:0004222 ... O14672 29224781
    29246 6be6:D (2.8) BS02 CA 3.4.24.81 GO:0004222 ... O14672 29224781
    29247 6bea:A (1.97) BS01 CA ? N/A A0A0H2V5A3 31036849
    29248 6bfp:A (1.292) BS01 CA 3.4.21.4 GO:0004175 ... P00760 30876891
    29249 6bgc:A (2.082) BS02 CA ? GO:0005886 ... Q08255 29318719
    29250 6bgc:B (2.082) BS02 CA ? GO:0005886 ... Q08255 29318719
    29251 6bgd:A (1.47) BS01 CA ? GO:0005886 ... Q08255 29318719
    29252 6bgi:A (3.8) BS01 CA ? GO:0005229 ... Q8BHY3 29236684
    29253 6bgi:A (3.8) BS02 CA ? GO:0005229 ... Q8BHY3 29236684
    29254 6bgi:B (3.8) BS01 CA ? GO:0005229 ... Q8BHY3 29236684
    29255 6bgi:B (3.8) BS02 CA ? GO:0005229 ... Q8BHY3 29236684
    29256 6bgj:A (3.8) BS01 CA ? GO:0005229 ... Q8BHY3 29236684
    29257 6bgj:B (3.8) BS01 CA ? GO:0005229 ... Q8BHY3 29236684
    29258 6bgp:A (2.75) BS01 CA 3.4.22.54 GO:0004198 ... P20807 29382717
    29259 6bgp:A (2.75) BS02 CA 3.4.22.54 GO:0004198 ... P20807 29382717
    29260 6bgp:B (2.75) BS01 CA 3.4.22.54 GO:0004198 ... P20807 29382717
    29261 6bgp:B (2.75) BS02 CA 3.4.22.54 GO:0004198 ... P20807 29382717
    29262 6bgp:C (2.75) BS01 CA 3.4.22.54 GO:0004198 ... P20807 29382717
    29263 6bgp:C (2.75) BS02 CA 3.4.22.54 GO:0004198 ... P20807 29382717
    29264 6bgp:D (2.75) BS01 CA 3.4.22.54 GO:0004198 ... P20807 29382717
    29265 6bgp:D (2.75) BS02 CA 3.4.22.54 GO:0004198 ... P20807 29382717
    29266 6bia:A (2.8) BS01 CA N/A N/A N/A 29681469
    29267 6bia:B (2.8) BS01 CA N/A N/A N/A 29681469
    29268 6bia:C (2.8) BS01 CA N/A N/A N/A 29681469
    29269 6bjd:A (2.8) BS01 CA 3.4.22.54 GO:0004198 ... P20807 29382717
    29270 6bjd:A (2.8) BS02 CA 3.4.22.54 GO:0004198 ... P20807 29382717
    29271 6bjd:B (2.8) BS01 CA 3.4.22.54 GO:0004198 ... P20807 29382717
    29272 6bjd:B (2.8) BS02 CA 3.4.22.54 GO:0004198 ... P20807 29382717
    29273 6bjd:C (2.8) BS02 CA 3.4.22.54 GO:0004198 ... P20807 29382717
    29274 6bjd:C (2.8) BS03 CA 3.4.22.54 GO:0004198 ... P20807 29382717
    29275 6bjd:D (2.8) BS01 CA 3.4.22.54 GO:0004198 ... P20807 29382717
    29276 6bjd:D (2.8) BS02 CA 3.4.22.54 GO:0004198 ... P20807 29382717
    29277 6bk5:A (2.401) BS01 CA 2.3.2.27 GO:0001784 ... F2UL73 29498112
    29278 6bkj:A (3.2) BS02 CA 3.4.22.54 GO:0004198 ... P20807 29382717
    29279 6bkj:A (3.2) BS03 CA 3.4.22.54 GO:0004198 ... P20807 29382717
    29280 6bkj:B (3.2) BS02 CA 3.4.22.54 GO:0004198 ... P20807 29382717
    29281 6bkj:B (3.2) BS03 CA 3.4.22.54 GO:0004198 ... P20807 29382717
    29282 6bkj:C (3.2) BS02 CA 3.4.22.54 GO:0004198 ... P20807 29382717
    29283 6bkj:C (3.2) BS03 CA 3.4.22.54 GO:0004198 ... P20807 29382717
    29284 6bkj:D (3.2) BS02 CA 3.4.22.54 GO:0004198 ... P20807 29382717
    29285 6bkj:D (3.2) BS03 CA 3.4.22.54 GO:0004198 ... P20807 29382717
    29286 6bkx:A (1.65) BS01 CA 1.1.1.42 GO:0000287 ... O75874 30004704
    29287 6bkx:B (1.65) BS02 CA 1.1.1.42 GO:0000287 ... O75874 30004704
    29288 6bkx:C (1.65) BS01 CA 1.1.1.42 GO:0000287 ... O75874 30004704
    29289 6bl1:A (2.02) BS01 CA 1.1.1.42 GO:0000287 ... O75874 30004704
    29290 6bl1:B (2.02) BS02 CA 1.1.1.42 GO:0000287 ... O75874 30004704
    29291 6bl1:C (2.02) BS01 CA 1.1.1.42 GO:0000287 ... O75874 30004704
    29292 6bl2:B (1.92) BS01 CA 1.1.1.42 GO:0000287 ... O75874 30004704
    29293 6bl2:C (1.92) BS01 CA 1.1.1.42 GO:0000287 ... O75874 30004704
    29294 6bmt:A (2.403) BS01 CA 1.11.2.2 GO:0004601 ... P05164 29524428
    29295 6bn2:A (1.65) BS01 CA 2.3.1.9 GO:0003985 ... A0A077EEP0 N/A
    29296 6bqv:A (3.1) BS01 CA ? GO:0002250 ... Q8TD43 29217581
    29297 6bqv:B (3.1) BS01 CA ? GO:0002250 ... Q8TD43 29217581
    29298 6bqv:C (3.1) BS02 CA ? GO:0002250 ... Q8TD43 29217581
    29299 6bqv:D (3.1) BS02 CA ? GO:0002250 ... Q8TD43 29217581
    29300 6br1:A (2.304) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 29406710
    29301 6br1:C (2.304) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 29406710
    29302 6br5:A (2.03791) BS01 CA 3.2.1.18 GO:0004308 ... E0UY46 29453852
    29303 6br6:A (2.03984) BS01 CA 3.2.1.18 GO:0004308 ... E0UY46 29453852
    29304 6brf:A (2.5) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 29406710
    29305 6brf:C (2.5) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 29406710
    29306 6bry:A (2.7) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 29406710
    29307 6bry:C (2.7) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 29406710
    29308 6bs2:A (2.65) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 29406710
    29309 6bs2:C (2.65) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 29406710
    29310 6bs3:B (2.3) BS02 CA N/A GO:0005524 ... N/A 31036728
    29311 6bs6:A (2.17) BS11 CA 3.2.1.1 GO:0000272 ... Q8A1G3 29603462
    29312 6bs6:A (2.17) BS12 CA 3.2.1.1 GO:0000272 ... Q8A1G3 29603462
    29313 6bs6:B (2.17) BS11 CA 3.2.1.1 GO:0000272 ... Q8A1G3 29603462
    29314 6bs6:B (2.17) BS12 CA 3.2.1.1 GO:0000272 ... Q8A1G3 29603462
    29315 6bsg:A (2.44) BS04 CA 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 29295939
    29316 6bsg:A (2.44) BS05 CA 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 29295939
    29317 6bsh:A (2.649) BS04 CA 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 29295939
    29318 6bsh:A (2.649) BS05 CA 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 29295939
    29319 6bsi:A (3.25) BS04 CA 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 29295939
    29320 6bsj:A (2.89) BS04 CA 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 29295939
    29321 6bt9:A (2.26) BS01 CA N/A GO:0004553 ... N/A 30796308
    29322 6bt9:B (2.26) BS01 CA N/A GO:0004553 ... N/A 30796308
    29323 6btx:A (3.2) BS01 CA ? GO:0005381 ... Q6MLJ0 30082682
    29324 6bum:A (1.51) BS01 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    29325 6bum:B (1.51) BS01 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    29326 6bum:C (1.51) BS01 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    29327 6bum:D (1.51) BS01 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    29328 6bun:A (1.78) BS01 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    29329 6bun:A (1.78) BS06 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    29330 6bun:B (1.78) BS01 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    29331 6bun:C (1.78) BS01 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    29332 6bun:C (1.78) BS05 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    29333 6bun:C (1.78) BS06 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    29334 6bun:D (1.78) BS02 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    29335 6buo:A (1.85) BS01 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    29336 6buo:B (1.85) BS01 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    29337 6buo:C (1.85) BS01 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    29338 6buo:D (1.85) BS03 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    29339 6bup:A (1.88) BS01 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    29340 6bup:B (1.88) BS02 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    29341 6bup:C (1.88) BS02 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    29342 6bup:D (1.88) BS01 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    29343 6buq:A (1.88) BS01 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    29344 6buq:B (1.88) BS02 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    29345 6buq:C (1.88) BS02 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    29346 6buq:D (1.88) BS03 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    29347 6bur:A (2.18) BS02 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    29348 6bur:B (2.18) BS02 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    29349 6bur:C (2.18) BS02 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    29350 6bur:D (2.18) BS02 CA 3.5.2.15 GO:0016787 ... Q2RGM7 31181074
    29351 6bvd:A (2.09) BS01 CA ? GO:0004222 ... A0A384E125 29688327
    29352 6bvd:B (2.09) BS01 CA ? GO:0004222 ... A0A384E125 29688327
    29353 6bvh:A (1.927) BS02 CA 3.4.21.4 GO:0004175 ... P00760 30668585
    29354 6bwn:A (2.94) BS01 CA ? GO:0005509 ... Q99PJ1 32963095
    29355 6bwn:A (2.94) BS02 CA ? GO:0005509 ... Q99PJ1 32963095
    29356 6bx7:A (2.85) BS01 CA ? GO:0005509 ... Q08174 31583286
    29357 6bx7:A (2.85) BS02 CA ? GO:0005509 ... Q08174 31583286
    29358 6bx7:A (2.85) BS03 CA ? GO:0005509 ... Q08174 31583286
    29359 6bx7:A (2.85) BS04 CA ? GO:0005509 ... Q08174 31583286
    29360 6bx7:A (2.85) BS05 CA ? GO:0005509 ... Q08174 31583286
    29361 6bx7:A (2.85) BS06 CA ? GO:0005509 ... Q08174 31583286
    29362 6bx7:A (2.85) BS07 CA ? GO:0005509 ... Q08174 31583286
    29363 6bx7:A (2.85) BS08 CA ? GO:0005509 ... Q08174 31583286
    29364 6bx7:A (2.85) BS09 CA ? GO:0005509 ... Q08174 31583286
    29365 6bx7:A (2.85) BS10 CA ? GO:0005509 ... Q08174 31583286
    29366 6bx7:A (2.85) BS11 CA ? GO:0005509 ... Q08174 31583286
    29367 6bxb:A (2.39) BS01 CA ? N/A P05106
    P20701    		 30018079
    29368 6bxf:A (3.2) BS01 CA ? N/A P05106
    P20701    		 30018079
    29369 6bxu:A (3.79) BS01 CA ? GO:0005509 ... Q99PJ1 32963095
    29370 6bxu:A (3.79) BS02 CA ? GO:0005509 ... Q99PJ1 32963095
    29371 6bxu:A (3.79) BS03 CA ? GO:0005509 ... Q99PJ1 32963095
    29372 6bxu:A (3.79) BS04 CA ? GO:0005509 ... Q99PJ1 32963095
    29373 6bxu:A (3.79) BS05 CA ? GO:0005509 ... Q99PJ1 32963095
    29374 6bxu:B (3.79) BS01 CA ? GO:0005509 ... Q99PJ1 32963095
    29375 6bxu:B (3.79) BS02 CA ? GO:0005509 ... Q99PJ1 32963095
    29376 6bxu:B (3.79) BS03 CA ? GO:0005509 ... Q99PJ1 32963095
    29377 6bxu:B (3.79) BS04 CA ? GO:0005509 ... Q99PJ1 32963095
    29378 6bxu:B (3.79) BS05 CA ? GO:0005509 ... Q99PJ1 32963095
    29379 6bxz:A (2.09) BS01 CA ? GO:0005509 ... F1SD06 30527337
    29380 6bxz:A (2.09) BS02 CA ? GO:0005509 ... F1SD06 30527337
    29381 6bxz:A (2.09) BS03 CA ? GO:0005509 ... F1SD06 30527337
    29382 6bxz:C (2.09) BS01 CA ? GO:0005509 ... F1SD06 30527337
    29383 6bxz:C (2.09) BS02 CA ? GO:0005509 ... F1SD06 30527337
    29384 6bxz:C (2.09) BS03 CA ? GO:0005509 ... F1SD06 30527337
    29385 6byp:A (1.9) BS01 CA 4.2.2.- GO:0005576 ... A0A109PTH9 29382716
    29386 6byp:A (1.9) BS02 CA 4.2.2.- GO:0005576 ... A0A109PTH9 29382716
    29387 6byp:B (1.9) BS01 CA 4.2.2.- GO:0005576 ... A0A109PTH9 29382716
    29388 6byp:B (1.9) BS02 CA 4.2.2.- GO:0005576 ... A0A109PTH9 29382716
    29389 6byt:A (2.2) BS04 CA 4.2.2.- GO:0005576 ... A0A109PTH9 29382716
    29390 6byt:A (2.2) BS05 CA 4.2.2.- GO:0005576 ... A0A109PTH9 29382716
    29391 6byt:B (2.2) BS03 CA 4.2.2.- GO:0005576 ... A0A109PTH9 29382716
    29392 6byt:B (2.2) BS04 CA 4.2.2.- GO:0005576 ... A0A109PTH9 29382716
    29393 6byv:A (-1.00) BS01 CA ? N/A P98155 29965730
    29394 6byv:A (-1.00) BS02 CA ? N/A P98155 29965730
    29395 6byv:A (-1.00) BS03 CA ? N/A P98155 29965730
    29396 6byx:A (2.208) BS03 CA 4.2.2.- GO:0005576 ... A0A109PTH9 29382716
    29397 6byx:A (2.208) BS04 CA 4.2.2.- GO:0005576 ... A0A109PTH9 29382716
    29398 6byx:B (2.208) BS01 CA 4.2.2.- GO:0005576 ... A0A109PTH9 29382716
    29399 6byx:B (2.208) BS02 CA 4.2.2.- GO:0005576 ... A0A109PTH9 29382716
    29400 6bz3:A (2.497) BS03 CA 2.7.10.2 GO:0004713 ... P34152 29479476
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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