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BioLiP
Download all results in tab-seperated text for 44457 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    27601 5tr2:A (2.5) BS01 CA 5.4.2.2 GO:0000287 ... P36871 28117557
    27602 5tr2:B (2.5) BS01 CA 5.4.2.2 GO:0000287 ... P36871 28117557
    27603 5trq:A (1.3) BS01 CA ? GO:0046872 ... A0A067YX61 N/A
    27604 5trx:B (2.38) BS02 CA ? GO:0046872 ... Q45135 N/A
    27605 5ts2:A (2.3) BS02 CA 2.7.7.3 GO:0003824 ... Q9I6D1 N/A
    27606 5tsp:A (1.24) BS02 CA 3.2.1.18 GO:0004308 ... A0A0H2YQR1 28315686
    27607 5tsp:B (1.24) BS02 CA 3.2.1.18 GO:0004308 ... A0A0H2YQR1 28315686
    27608 5tsq:A (1.53) BS01 CA 3.2.2.1 GO:0005829 ... A4H9Q9 N/A
    27609 5tua:A (3.3) BS01 CA ? GO:0000325 ... Q94KI8 28096396
    27610 5tua:A (3.3) BS02 CA ? GO:0000325 ... Q94KI8 28096396
    27611 5tvq:A (2.35) BS01 CA 3.1.4.- GO:0003824 ... Q9JJX7 28912134
    27612 5twt:A (1.296) BS02 CA 1.11.1.7 GO:0004601 ... A0A1S4NYF8 27879392
    27613 5twt:A (1.296) BS03 CA 1.11.1.7 GO:0004601 ... A0A1S4NYF8 27879392
    27614 5tx6:A (2.746) BS01 CA ? GO:0005576 ... P27090 28228478
    27615 5txx:A (1.948) BS05 CA 2.7.7.7 GO:0003677 ... Q9NP87 28811466
    27616 5txx:A (1.948) BS06 CA 2.7.7.7 GO:0003677 ... Q9NP87 28811466
    27617 5txz:A (1.651) BS07 CA 2.7.7.7 GO:0003677 ... Q9NP87 28811466
    27618 5tyb:A (1.848) BS06 CA 2.7.7.7 GO:0003677 ... Q9NP87 28811466
    27619 5tyc:A (2.101) BS07 CA 2.7.7.7 GO:0003677 ... Q9NP87 28811466
    27620 5tyu:A (2.048) BS07 CA 2.7.7.7 GO:0003677 ... Q9NP87 28811466
    27621 5tzb:A (1.977) BS01 CA N/A N/A N/A 28695846
    27622 5tzb:B (1.977) BS01 CA N/A N/A N/A 28695846
    27623 5tzb:C (1.977) BS01 CA N/A N/A N/A 28695846
    27624 5tzb:D (1.977) BS01 CA N/A N/A N/A 28695846
    27625 5tzb:E (1.977) BS01 CA N/A N/A N/A 28695846
    27626 5tzb:F (1.977) BS01 CA N/A N/A N/A 28695846
    27627 5tzb:G (1.977) BS01 CA N/A N/A N/A 28695846
    27628 5tzb:H (1.977) BS01 CA N/A N/A N/A 28695846
    27629 5u08:B (1.52) BS03 CA ? GO:0008080 ... A0A059WZ16 28756664
    27630 5u08:C (1.52) BS02 CA ? GO:0008080 ... A0A059WZ16 28756664
    27631 5u08:C (1.52) BS03 CA ? GO:0008080 ... A0A059WZ16 28756664
    27632 5u1i:A (1.932) BS02 CA ? GO:0003677 ... Q2MG72 28876898
    27633 5u2r:A (1.8) BS05 CA 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 28402499
    27634 5u2r:A (1.8) BS06 CA 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 28402499
    27635 5u2s:A (2.3) BS05 CA 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 28402499
    27636 5u2t:A (1.79) BS05 CA 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 28402499
    27637 5u38:A (1.6) BS04 CA ? GO:0030246 ... G1EUI6 28867234
    27638 5u3a:A (0.95) BS01 CA 3.2.1.1 GO:0003824 ... P04746 31241898
    27639 5u3e:A (2.3) BS03 CA ? GO:0030246 ... P58906 28803976
    27640 5u3k:H (2.637) BS02 CA N/A N/A N/A 28783671
    27641 5u5i:A (2.2) BS02 CA 1.17.1.8 GO:0000166 ... D8R6G2 29187521
    27642 5u5n:A (2.1) BS02 CA 1.17.1.8 GO:0000166 ... D8R6G2 29187521
    27643 5u6j:H (2.3) BS02 CA 3.4.21.21 GO:0004252 ... P08709 28460818
    27644 5u8o:A (2.4) BS03 CA ? GO:0016787 ... A0A0H3KRR5 N/A
    27645 5u8o:B (2.4) BS01 CA ? GO:0016787 ... A0A0H3KRR5 N/A
    27646 5u95:B (2.25) BS01 CA 6.2.1.-
    6.2.1.12
    6.2.1.34    		 GO:0003824 ... O24146 N/A
    27647 5u95:C (2.25) BS01 CA 6.2.1.-
    6.2.1.12
    6.2.1.34    		 GO:0003824 ... O24146 N/A
    27648 5u95:D (2.25) BS01 CA 6.2.1.-
    6.2.1.12
    6.2.1.34    		 GO:0003824 ... O24146 N/A
    27649 5ub5:B (2.089) BS01 CA ? GO:0005509 ... P46531 28775322
    27650 5uba:A (1.54) BS01 CA 5.4.99.- GO:0001522 ... Q96CM3 N/A
    27651 5ubj:A (1.7) BS01 CA 3.2.1.55 GO:0046373 ... Q5AUX2 28890404
    27652 5ubj:A (1.7) BS02 CA 3.2.1.55 GO:0046373 ... Q5AUX2 28890404
    27653 5ubo:S (2.39) BS01 CA ? GO:0051015 ... P06396 29259197
    27654 5ubo:S (2.39) BS02 CA ? GO:0051015 ... P06396 29259197
    27655 5ucq:A (1.4) BS01 CA 3.6.1.1 GO:0000287 ... H0USY5 N/A
    27656 5ucq:A (1.4) BS02 CA 3.6.1.1 GO:0000287 ... H0USY5 N/A
    27657 5ucq:A (1.4) BS03 CA 3.6.1.1 GO:0000287 ... H0USY5 N/A
    27658 5ucq:B (1.4) BS01 CA 3.6.1.1 GO:0000287 ... H0USY5 N/A
    27659 5ucq:B (1.4) BS02 CA 3.6.1.1 GO:0000287 ... H0USY5 N/A
    27660 5ucq:C (1.4) BS01 CA 3.6.1.1 GO:0000287 ... H0USY5 N/A
    27661 5ucq:C (1.4) BS02 CA 3.6.1.1 GO:0000287 ... H0USY5 N/A
    27662 5ucq:C (1.4) BS03 CA 3.6.1.1 GO:0000287 ... H0USY5 N/A
    27663 5ud0:B (1.647) BS03 CA 4.1.2.13 GO:0004332 ... P56109 29593097
    27664 5ud6:A (2.4) BS01 CA 4.3.3.7 GO:0008840 ... M1V4H9 N/A
    27665 5ud6:B (2.4) BS02 CA 4.3.3.7 GO:0008840 ... M1V4H9 N/A
    27666 5ud6:C (2.4) BS01 CA 4.3.3.7 GO:0008840 ... M1V4H9 N/A
    27667 5ud6:D (2.4) BS02 CA 4.3.3.7 GO:0008840 ... M1V4H9 N/A
    27668 5ue1:A (1.14) BS02 CA 3.2.2.9 GO:0003824 ... Q5E2X3 N/A
    27669 5ue2:A (-1.00) BS03 CA 3.4.24.23 GO:0002779 ... P09237 28648610
    27670 5ue2:A (-1.00) BS04 CA 3.4.24.23 GO:0002779 ... P09237 28648610
    27671 5ue3:A (1.599) BS03 CA 3.4.24.35 GO:0004222 ... P14780 28860188
    27672 5ue3:A (1.599) BS04 CA 3.4.24.35 GO:0004222 ... P14780 28860188
    27673 5ue3:A (1.599) BS05 CA 3.4.24.35 GO:0004222 ... P14780 28860188
    27674 5ue3:B (1.599) BS03 CA 3.4.24.35 GO:0004222 ... P14780 28860188
    27675 5ue3:B (1.599) BS04 CA 3.4.24.35 GO:0004222 ... P14780 28860188
    27676 5ue4:A (1.8) BS03 CA 3.4.24.35 GO:0004222 ... P14780 28860188
    27677 5ue4:A (1.8) BS04 CA 3.4.24.35 GO:0004222 ... P14780 28860188
    27678 5ue4:A (1.8) BS05 CA 3.4.24.35 GO:0004222 ... P14780 28860188
    27679 5ue4:B (1.8) BS03 CA 3.4.24.35 GO:0004222 ... P14780 28860188
    27680 5ue4:B (1.8) BS04 CA 3.4.24.35 GO:0004222 ... P14780 28860188
    27681 5ue5:A (-1.00) BS05 CA 3.4.24.23 GO:0002779 ... P09237 28648610
    27682 5ue5:A (-1.00) BS06 CA 3.4.24.23 GO:0002779 ... P09237 28648610
    27683 5ufq:A (2.199) BS03 CA 3.6.5.2 GO:0003924 ... P01116 28724936
    27684 5ufq:B (2.199) BS03 CA 3.6.5.2 GO:0003924 ... P01116 28724936
    27685 5ug4:A (2.15) BS01 CA 2.3.1.57 GO:0000287 ... Q9KL03 N/A
    27686 5ug4:A (2.15) BS02 CA 2.3.1.57 GO:0000287 ... Q9KL03 N/A
    27687 5ug4:A (2.15) BS03 CA 2.3.1.57 GO:0000287 ... Q9KL03 N/A
    27688 5ug4:B (2.15) BS01 CA 2.3.1.57 GO:0000287 ... Q9KL03 N/A
    27689 5ug4:B (2.15) BS02 CA 2.3.1.57 GO:0000287 ... Q9KL03 N/A
    27690 5ug4:B (2.15) BS03 CA 2.3.1.57 GO:0000287 ... Q9KL03 N/A
    27691 5ug4:C (2.15) BS01 CA 2.3.1.57 GO:0000287 ... Q9KL03 N/A
    27692 5ug4:C (2.15) BS02 CA 2.3.1.57 GO:0000287 ... Q9KL03 N/A
    27693 5ug4:C (2.15) BS03 CA 2.3.1.57 GO:0000287 ... Q9KL03 N/A
    27694 5ug7:A (1.8) BS01 CA ? N/A P10820 29416110
    27695 5ug7:A (1.8) BS02 CA ? N/A P10820 29416110
    27696 5ug7:A (1.8) BS03 CA ? N/A P10820 29416110
    27697 5ugo:A (1.897) BS05 CA 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 28759020
    27698 5ugo:A (1.897) BS06 CA 2.7.7.7
    4.2.99.-
    4.2.99.18    		 GO:0001701 ... P06746 28759020
    27699 5uj6:A (1.9) BS01 CA ? GO:0004553 ... A0A078SUX9 28578872
    27700 5uj6:B (1.9) BS01 CA ? GO:0004553 ... A0A078SUX9 28578872
    27701 5ujp:A (1.42) BS01 CA ? GO:0046872 ... A0A125SA29 N/A
    27702 5ujp:B (1.42) BS01 CA ? GO:0046872 ... A0A125SA29 N/A
    27703 5uk5:A (2.506) BS03 CA ? GO:0005509 ... Q07008 28254785
    27704 5uk5:A (2.506) BS04 CA ? GO:0005509 ... Q07008 28254785
    27705 5uk5:A (2.506) BS05 CA ? GO:0005509 ... Q07008 28254785
    27706 5ukg:A (2.36) BS01 CA N/A GO:0005509 ... N/A 29338710
    27707 5ukg:A (2.36) BS02 CA N/A GO:0005509 ... N/A 29338710
    27708 5ukg:A (2.36) BS03 CA N/A GO:0005509 ... N/A 29338710
    27709 5ukg:A (2.36) BS04 CA N/A GO:0005509 ... N/A 29338710
    27710 5ukg:B (2.36) BS01 CA N/A GO:0005509 ... N/A 29338710
    27711 5ukg:B (2.36) BS02 CA N/A GO:0005509 ... N/A 29338710
    27712 5ukg:B (2.36) BS03 CA N/A GO:0005509 ... N/A 29338710
    27713 5ukg:B (2.36) BS04 CA N/A GO:0005509 ... N/A 29338710
    27714 5ukh:A (1.98) BS01 CA ? N/A T1ZG69 28696203
    27715 5uli:A (2.1) BS01 CA 3.1.13.-
    3.6.1.-    		 GO:0000166 ... O70348 28283058
    27716 5ulj:A (1.911) BS01 CA 3.6.1.- GO:0000166 ... A3LNL5 28283058
    27717 5ulj:B (1.911) BS01 CA 3.6.1.- GO:0000166 ... A3LNL5 28283058
    27718 5ulu:A (2.85) BS01 CA ? GO:0005509 ... Q99PF4 30033219
    27719 5ulu:A (2.85) BS02 CA ? GO:0005509 ... Q99PF4 30033219
    27720 5ulu:A (2.85) BS03 CA ? GO:0005509 ... Q99PF4 30033219
    27721 5ulu:A (2.85) BS04 CA ? GO:0005509 ... Q99PF4 30033219
    27722 5ulu:A (2.85) BS05 CA ? GO:0005509 ... Q99PF4 30033219
    27723 5ulu:A (2.85) BS06 CA ? GO:0005509 ... Q99PF4 30033219
    27724 5uly:A (2.64) BS01 CA ? GO:0005509 ... Q96QU1 32963095
    27725 5uly:A (2.64) BS02 CA ? GO:0005509 ... Q96QU1 32963095
    27726 5uly:B (2.64) BS01 CA ? GO:0005509 ... Q96QU1 32963095
    27727 5uly:B (2.64) BS02 CA ? GO:0005509 ... Q96QU1 32963095
    27728 5uly:C (2.64) BS01 CA ? GO:0005509 ... Q96QU1 32963095
    27729 5uly:C (2.64) BS02 CA ? GO:0005509 ... Q96QU1 32963095
    27730 5uly:D (2.64) BS01 CA ? GO:0005509 ... Q96QU1 32963095
    27731 5uly:D (2.64) BS02 CA ? GO:0005509 ... Q96QU1 32963095
    27732 5un2:A (2.96) BS01 CA ? GO:0005509 ... Q99PF4 30033219
    27733 5un2:A (2.96) BS02 CA ? GO:0005509 ... Q99PF4 30033219
    27734 5un2:A (2.96) BS03 CA ? GO:0005509 ... Q99PF4 30033219
    27735 5un2:A (2.96) BS04 CA ? GO:0005509 ... Q99PF4 30033219
    27736 5un2:A (2.96) BS05 CA ? GO:0005509 ... Q99PF4 30033219
    27737 5un2:A (2.96) BS06 CA ? GO:0005509 ... Q99PF4 30033219
    27738 5un2:A (2.96) BS07 CA ? GO:0005509 ... Q99PF4 30033219
    27739 5un2:A (2.96) BS08 CA ? GO:0005509 ... Q99PF4 30033219
    27740 5un3:A (1.60004) BS01 CA 3.4.24.27 GO:0004222 ... P00800 30198901
    27741 5un3:A (1.60004) BS03 CA 3.4.24.27 GO:0004222 ... P00800 30198901
    27742 5un3:A (1.60004) BS04 CA 3.4.24.27 GO:0004222 ... P00800 30198901
    27743 5up7:A (1.79) BS01 CA 1.16.3.1 GO:0004322 ... P02794 28590729
    27744 5uqz:A (1.149) BS01 CA ? N/A Q8DTF1 29685986
    27745 5uu7:A (1.60001) BS01 CA 3.4.24.27 GO:0004222 ... P00800 30198901
    27746 5uu7:A (1.60001) BS03 CA 3.4.24.27 GO:0004222 ... P00800 30198901
    27747 5uu7:A (1.60001) BS04 CA 3.4.24.27 GO:0004222 ... P00800 30198901
    27748 5uu8:A (2.5) BS01 CA 3.4.24.27 GO:0004222 ... P00800 30198901
    27749 5uu8:A (2.5) BS03 CA 3.4.24.27 GO:0004222 ... P00800 30198901
    27750 5uu8:A (2.5) BS04 CA 3.4.24.27 GO:0004222 ... P00800 30198901
    27751 5uu9:A (1.59969) BS01 CA 3.4.24.27 GO:0004222 ... P00800 30198901
    27752 5uu9:A (1.59969) BS03 CA 3.4.24.27 GO:0004222 ... P00800 30198901
    27753 5uu9:A (1.59969) BS04 CA 3.4.24.27 GO:0004222 ... P00800 30198901
    27754 5uua:A (1.6) BS01 CA 3.4.24.27 GO:0004222 ... P00800 30198901
    27755 5uua:A (1.6) BS04 CA 3.4.24.27 GO:0004222 ... P00800 30198901
    27756 5uub:A (1.6) BS01 CA 3.4.24.27 GO:0004222 ... P00800 30198901
    27757 5uub:A (1.6) BS03 CA 3.4.24.27 GO:0004222 ... P00800 30198901
    27758 5uub:A (1.6) BS04 CA 3.4.24.27 GO:0004222 ... P00800 30198901
    27759 5uuc:A (1.60001) BS01 CA 3.4.24.27 GO:0004222 ... P00800 30198901
    27760 5uuc:A (1.60001) BS03 CA 3.4.24.27 GO:0004222 ... P00800 30198901
    27761 5uuc:A (1.60001) BS04 CA 3.4.24.27 GO:0004222 ... P00800 30198901
    27762 5uud:A (1.6) BS01 CA 3.4.24.27 GO:0004222 ... P00800 30198901
    27763 5uud:A (1.6) BS03 CA 3.4.24.27 GO:0004222 ... P00800 30198901
    27764 5uud:A (1.6) BS04 CA 3.4.24.27 GO:0004222 ... P00800 30198901
    27765 5uue:A (1.6) BS01 CA 3.4.24.27 GO:0004222 ... P00800 30198901
    27766 5uue:A (1.6) BS03 CA 3.4.24.27 GO:0004222 ... P00800 30198901
    27767 5uue:A (1.6) BS04 CA 3.4.24.27 GO:0004222 ... P00800 30198901
    27768 5uuy:A (1.88) BS02 CA ? GO:0005537 ... P58907 28939357
    27769 5uvl:A (2.65) BS01 CA 3.4.21.64 GO:0004252 ... P06873 28875031
    27770 5uvl:A (2.65) BS02 CA 3.4.21.64 GO:0004252 ... P06873 28875031
    27771 5uw5:A (2.94) BS02 CA 3.4.21.-
    3.4.21.26    		 GO:0004252 ... R4P353 28584123
    27772 5uw5:A (2.94) BS03 CA 3.4.21.-
    3.4.21.26    		 GO:0004252 ... R4P353 28584123
    27773 5uw5:B (2.94) BS02 CA 3.4.21.-
    3.4.21.26    		 GO:0004252 ... R4P353 28584123
    27774 5uw5:C (2.94) BS02 CA 3.4.21.-
    3.4.21.26    		 GO:0004252 ... R4P353 28584123
    27775 5uw6:A (3.3) BS03 CA 3.4.21.-
    3.4.21.26    		 GO:0004252 ... R4P353 28584123
    27776 5uw6:B (3.3) BS03 CA 3.4.21.-
    3.4.21.26    		 GO:0004252 ... R4P353 28584123
    27777 5uw6:B (3.3) BS04 CA 3.4.21.-
    3.4.21.26    		 GO:0004252 ... R4P353 28584123
    27778 5uw6:C (3.3) BS03 CA 3.4.21.-
    3.4.21.26    		 GO:0004252 ... R4P353 28584123
    27779 5uwk:A (1.6) BS03 CA 3.4.24.- GO:0004222 ... P45452 28653849
    27780 5uwk:A (1.6) BS04 CA 3.4.24.- GO:0004222 ... P45452 28653849
    27781 5uwk:A (1.6) BS05 CA 3.4.24.- GO:0004222 ... P45452 28653849
    27782 5uwk:B (1.6) BS03 CA 3.4.24.- GO:0004222 ... P45452 28653849
    27783 5uwk:B (1.6) BS04 CA 3.4.24.- GO:0004222 ... P45452 28653849
    27784 5uwk:B (1.6) BS05 CA 3.4.24.- GO:0004222 ... P45452 28653849
    27785 5uwl:A (2.55) BS03 CA 3.4.24.- GO:0004222 ... P45452 28653849
    27786 5uwl:A (2.55) BS04 CA 3.4.24.- GO:0004222 ... P45452 28653849
    27787 5uwl:A (2.55) BS05 CA 3.4.24.- GO:0004222 ... P45452 28653849
    27788 5uwl:B (2.55) BS02 CA 3.4.24.- GO:0004222 ... P45452 28653849
    27789 5uwl:B (2.55) BS03 CA 3.4.24.- GO:0004222 ... P45452 28653849
    27790 5uwm:A (1.62) BS04 CA 3.4.24.- GO:0004222 ... P45452 28653849
    27791 5uwm:A (1.62) BS05 CA 3.4.24.- GO:0004222 ... P45452 28653849
    27792 5uwm:A (1.62) BS06 CA 3.4.24.- GO:0004222 ... P45452 28653849
    27793 5uwm:B (1.62) BS05 CA 3.4.24.- GO:0004222 ... P45452 28653849
    27794 5uwm:B (1.62) BS06 CA 3.4.24.- GO:0004222 ... P45452 28653849
    27795 5uwm:B (1.62) BS07 CA 3.4.24.- GO:0004222 ... P45452 28653849
    27796 5uwn:A (3.2) BS03 CA 3.4.24.- GO:0004222 ... P45452 28653849
    27797 5uwn:A (3.2) BS04 CA 3.4.24.- GO:0004222 ... P45452 28653849
    27798 5uwn:B (3.2) BS03 CA 3.4.24.- GO:0004222 ... P45452 28653849
    27799 5uwn:B (3.2) BS04 CA 3.4.24.- GO:0004222 ... P45452 28653849
    27800 5uwn:C (3.2) BS03 CA 3.4.24.- GO:0004222 ... P45452 28653849
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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