Home Research COVID-19 Services Publications People Teaching Job Opening News Forum Lab Only
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 44457 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    24601 5gxp:A (2.8) BS07 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    24602 5gxp:A (2.8) BS08 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    24603 5gxp:B (2.8) BS01 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    24604 5gxp:B (2.8) BS02 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    24605 5gxp:B (2.8) BS03 CA 3.4.21.4 GO:0004175 ... P00760 N/A
    24606 5gxx:A (1.5) BS01 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    24607 5gxx:A (1.5) BS02 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    24608 5gxx:B (1.5) BS01 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    24609 5gxx:B (1.5) BS02 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    24610 5gxy:A (1.7) BS03 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    24611 5gxy:A (1.7) BS04 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    24612 5gxy:B (1.7) BS03 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    24613 5gxy:B (1.7) BS04 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    24614 5gxz:A (2.05) BS06 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    24615 5gxz:A (2.05) BS07 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    24616 5gxz:B (2.05) BS06 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    24617 5gxz:B (2.05) BS07 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    24618 5gy0:A (1.74) BS05 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    24619 5gy0:A (1.74) BS06 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    24620 5gy0:B (1.74) BS05 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    24621 5gy0:B (1.74) BS06 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    24622 5gy1:A (1.99) BS04 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    24623 5gy1:A (1.99) BS05 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    24624 5gy1:B (1.99) BS04 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    24625 5gy1:B (1.99) BS05 CA 3.2.1.- GO:0004553 ... Q9AJF8 30609216
    24626 5gz4:A (2.55) BS03 CA 3.6.1.- GO:0003676 ... A0A2D0TC04 N/A
    24627 5gz5:A (2.093) BS03 CA 3.6.1.- GO:0003676 ... A0A2D0TC04 N/A
    24628 5h05:A (2.55) BS04 CA N/A GO:0005975 ... N/A 28303907
    24629 5h05:A (2.55) BS05 CA N/A GO:0005975 ... N/A 28303907
    24630 5h05:B (2.55) BS04 CA N/A GO:0005975 ... N/A 28303907
    24631 5h05:B (2.55) BS05 CA N/A GO:0005975 ... N/A 28303907
    24632 5h05:C (2.55) BS04 CA N/A GO:0005975 ... N/A 28303907
    24633 5h05:C (2.55) BS05 CA N/A GO:0005975 ... N/A 28303907
    24634 5h05:D (2.55) BS04 CA N/A GO:0005975 ... N/A 28303907
    24635 5h05:D (2.55) BS05 CA N/A GO:0005975 ... N/A 28303907
    24636 5h06:A (1.95) BS03 CA N/A GO:0005975 ... N/A 28303907
    24637 5h06:A (1.95) BS04 CA N/A GO:0005975 ... N/A 28303907
    24638 5h06:B (1.95) BS03 CA N/A GO:0005975 ... N/A 28303907
    24639 5h06:B (1.95) BS04 CA N/A GO:0005975 ... N/A 28303907
    24640 5h06:C (1.95) BS04 CA N/A GO:0005975 ... N/A 28303907
    24641 5h06:C (1.95) BS05 CA N/A GO:0005975 ... N/A 28303907
    24642 5h06:D (1.95) BS04 CA N/A GO:0005975 ... N/A 28303907
    24643 5h06:D (1.95) BS05 CA N/A GO:0005975 ... N/A 28303907
    24644 5h0p:A (1.862) BS01 CA ? GO:0005509 ... Q96C19 28011271
    24645 5h0p:A (1.862) BS02 CA ? GO:0005509 ... Q96C19 28011271
    24646 5h0u:A (2.239) BS02 CA 3.4.24.80 GO:0004222 ... P50281 28951896
    24647 5h0u:A (2.239) BS05 CA 3.4.24.80 GO:0004222 ... P50281 28951896
    24648 5h18:A (1.4) BS02 CA ? GO:0000166 ... A0A2D0TCJ6 28939828
    24649 5h2f:O (2.2) BS01 CA ? GO:0009523 ... P0A431 28272640
    24650 5h2f:c (2.2) BS02 CA ? GO:0005737 ... Q8DIF8 28272640
    24651 5h2f:o (2.2) BS01 CA ? GO:0009523 ... P0A431 28272640
    24652 5h3z:B (2.0) BS01 CA 2.4.1.333 GO:0005975 ... A9KJS6 28198470
    24653 5h4y:A (1.9) BS01 CA ? GO:0016020 ... O00445 27793683
    24654 5h4y:A (1.9) BS02 CA ? GO:0016020 ... O00445 27793683
    24655 5h4y:A (1.9) BS03 CA ? GO:0016020 ... O00445 27793683
    24656 5h4z:A (3.01) BS01 CA ? GO:0016020 ... O00445 27793683
    24657 5h4z:A (3.01) BS02 CA ? GO:0016020 ... O00445 27793683
    24658 5h4z:A (3.01) BS03 CA ? GO:0016020 ... O00445 27793683
    24659 5h4z:B (3.01) BS01 CA ? GO:0016020 ... O00445 27793683
    24660 5h4z:B (3.01) BS02 CA ? GO:0016020 ... O00445 27793683
    24661 5h4z:B (3.01) BS03 CA ? GO:0016020 ... O00445 27793683
    24662 5h5g:A (2.2) BS02 CA ? GO:0003924 ... Q6GHP9 28456664
    24663 5h5h:A (1.7) BS02 CA ? GO:0003924 ... Q6GHP9 28456664
    24664 5h6u:A (2.006) BS06 CA ? GO:0042597 ... Q9KWT5 28768763
    24665 5h6u:A (2.006) BS07 CA ? GO:0042597 ... Q9KWT5 28768763
    24666 5h6u:B (2.006) BS06 CA ? GO:0042597 ... Q9KWT5 28768763
    24667 5h71:A (1.549) BS04 CA ? GO:0042597 ... Q9KWT5 28768763
    24668 5h71:B (1.549) BS04 CA ? GO:0042597 ... Q9KWT5 28768763
    24669 5h74:A (2.6) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 N/A
    24670 5h74:C (2.6) BS03 CA 3.6.5.- GO:0000226 ... Q2XVP4 N/A
    24671 5h7d:E (2.57) BS01 CA ? GO:0005509 ... O16305 28572639
    24672 5h7d:E (2.57) BS02 CA ? GO:0005509 ... O16305 28572639
    24673 5h7d:F (2.57) BS01 CA ? GO:0005509 ... O16305 28572639
    24674 5h7d:F (2.57) BS02 CA ? GO:0005509 ... O16305 28572639
    24675 5h7d:G (2.57) BS01 CA ? GO:0005509 ... O16305 28572639
    24676 5h7d:G (2.57) BS02 CA ? GO:0005509 ... O16305 28572639
    24677 5h7d:H (2.57) BS01 CA ? GO:0005509 ... O16305 28572639
    24678 5h7d:H (2.57) BS02 CA ? GO:0005509 ... O16305 28572639
    24679 5h7d:K (2.57) BS01 CA ? GO:0005509 ... O16305 28572639
    24680 5h7d:K (2.57) BS02 CA ? GO:0005509 ... O16305 28572639
    24681 5h7d:L (2.57) BS01 CA ? GO:0005509 ... O16305 28572639
    24682 5h7d:L (2.57) BS02 CA ? GO:0005509 ... O16305 28572639
    24683 5h7d:O (2.57) BS01 CA ? GO:0005509 ... O16305 28572639
    24684 5h7d:O (2.57) BS02 CA ? GO:0005509 ... O16305 28572639
    24685 5h7d:P (2.57) BS01 CA ? GO:0005509 ... O16305 28572639
    24686 5h7d:P (2.57) BS02 CA ? GO:0005509 ... O16305 28572639
    24687 5h7o:A (2.8) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 29180476
    24688 5h7o:C (2.8) BS02 CA 3.6.5.- GO:0000226 ... Q2XVP4 29180476
    24689 5h7w:A (1.9) BS03 CA 3.1.3.5 GO:0000166 ... A0A2I4HXH5 N/A
    24690 5h7w:B (1.9) BS03 CA 3.1.3.5 GO:0000166 ... A0A2I4HXH5 N/A
    24691 5h8x:A (1.3) BS01 CA 3.4.24.34 GO:0004222 ... P22894 27556138
    24692 5h8x:A (1.3) BS02 CA 3.4.24.34 GO:0004222 ... P22894 27556138
    24693 5h9o:B (2.37) BS01 CA ? N/A O08795 27462106
    24694 5h9o:B (2.37) BS02 CA ? N/A O08795 27462106
    24695 5h9o:D (2.37) BS01 CA ? N/A O08795 27462106
    24696 5h9o:D (2.37) BS02 CA ? N/A O08795 27462106
    24697 5hca:A (2.15) BS01 CA ? GO:0005509 ... P83003 27840680
    24698 5hca:B (2.15) BS01 CA ? GO:0005509 ... P83003 27840680
    24699 5hca:C (2.15) BS01 CA ? GO:0005509 ... P83003 27840680
    24700 5hcb:A (2.9) BS01 CA ? GO:0005509 ... P83003 27840680
    24701 5hcb:B (2.9) BS01 CA ? GO:0005509 ... P83003 27840680
    24702 5hch:A (2.9) BS01 CA ? GO:0030246 ... Q9HYN5 26898721
    24703 5hch:A (2.9) BS02 CA ? GO:0030246 ... Q9HYN5 26898721
    24704 5hdb:A (2.7012) BS01 CA ? GO:0007155 ... P08514 26631735
    24705 5hdb:A (2.7012) BS02 CA ? GO:0007155 ... P08514 26631735
    24706 5hdb:A (2.7012) BS03 CA ? GO:0007155 ... P08514 26631735
    24707 5hdb:A (2.7012) BS04 CA ? GO:0007155 ... P08514 26631735
    24708 5hdb:B (2.7012) BS02 CA ? N/A P05106 26631735
    24709 5hdb:C (2.7012) BS01 CA ? GO:0007155 ... P08514 26631735
    24710 5hdb:C (2.7012) BS02 CA ? GO:0007155 ... P08514 26631735
    24711 5hdb:C (2.7012) BS03 CA ? GO:0007155 ... P08514 26631735
    24712 5hdb:C (2.7012) BS04 CA ? GO:0007155 ... P08514 26631735
    24713 5hdb:D (2.7012) BS03 CA ? N/A P05106 26631735
    24714 5hdb:D (2.7012) BS04 CA ? N/A P05106 26631735
    24715 5hgj:A (1.399) BS01 CA ? N/A P56199 29440721
    24716 5hgj:B (1.399) BS01 CA ? N/A P56199 29440721
    24717 5hgt:A (1.75) BS01 CA 3.1.31.1 N/A P00644 N/A
    24718 5hha:A (1.24) BS01 CA ? GO:0002049 ... Q9I185 N/A
    24719 5hha:B (1.24) BS01 CA ? GO:0002049 ... Q9I185 N/A
    24720 5hht:A (1.5) BS01 CA 2.2.1.1 GO:0000287 ... P27302 27767080
    24721 5hht:B (1.5) BS03 CA 2.2.1.1 GO:0000287 ... P27302 27767080
    24722 5hi6:A (2.051) BS02 CA 1.5.1.3 GO:0004146 ... A0A3N4BLI0 N/A
    24723 5hit:A (2.85) BS02 CA ? GO:0005509 ... P62149 27618660
    24724 5hit:A (2.85) BS03 CA ? GO:0005509 ... P62149 27618660
    24725 5hj2:A (2.153) BS01 CA ? N/A P17301 29440721
    24726 5hj2:B (2.153) BS01 CA ? N/A P17301 29440721
    24727 5hj2:C (2.153) BS01 CA ? N/A P17301 29440721
    24728 5hj2:D (2.153) BS01 CA ? N/A P17301 29440721
    24729 5hj2:E (2.153) BS01 CA ? N/A P17301 29440721
    24730 5hje:A (1.4) BS02 CA 2.2.1.1 GO:0003824 ... P34736 27578891
    24731 5hjo:B (2.29) BS01 CA ? N/A O08795 27462106
    24732 5hjo:B (2.29) BS02 CA ? N/A O08795 27462106
    24733 5hjo:D (2.29) BS01 CA ? N/A O08795 27462106
    24734 5hjo:D (2.29) BS02 CA ? N/A O08795 27462106
    24735 5hjr:B (2.4) BS01 CA ? N/A O08795 27462106
    24736 5hjr:B (2.4) BS02 CA ? N/A O08795 27462106
    24737 5hjr:D (2.4) BS01 CA ? N/A O08795 27462106
    24738 5hjr:D (2.4) BS02 CA ? N/A O08795 27462106
    24739 5hkj:A (1.35) BS01 CA ? N/A P02745
    P02746
    P02747
    26973654
    24740 5hl3:A (1.4) BS01 CA ? GO:0046872 ... Q8Y4H2 29847585
    24741 5hl3:A (1.4) BS02 CA ? GO:0046872 ... Q8Y4H2 29847585
    24742 5hl3:A (1.4) BS03 CA ? GO:0046872 ... Q8Y4H2 29847585
    24743 5hl3:A (1.4) BS04 CA ? GO:0046872 ... Q8Y4H2 29847585
    24744 5hl3:A (1.4) BS05 CA ? GO:0046872 ... Q8Y4H2 29847585
    24745 5hlo:A (2.1) BS01 CA ? GO:0002523 ... P05109 27251136
    24746 5hlo:A (2.1) BS02 CA ? GO:0002523 ... P05109 27251136
    24747 5hlo:B (2.1) BS01 CA ? GO:0002523 ... P05109 27251136
    24748 5hlo:B (2.1) BS02 CA ? GO:0002523 ... P05109 27251136
    24749 5hlo:C (2.1) BS03 CA ? GO:0002523 ... P05109 27251136
    24750 5hlo:C (2.1) BS04 CA ? GO:0002523 ... P05109 27251136
    24751 5hlo:D (2.1) BS03 CA ? GO:0002523 ... P05109 27251136
    24752 5hlo:D (2.1) BS04 CA ? GO:0002523 ... P05109 27251136
    24753 5hlv:A (2.2) BS01 CA ? GO:0002523 ... P05109 27251136
    24754 5hlv:A (2.2) BS02 CA ? GO:0002523 ... P05109 27251136
    24755 5hlv:B (2.2) BS01 CA ? GO:0002523 ... P05109 27251136
    24756 5hlv:B (2.2) BS02 CA ? GO:0002523 ... P05109 27251136
    24757 5hlv:C (2.2) BS01 CA ? GO:0002523 ... P05109 27251136
    24758 5hlv:C (2.2) BS02 CA ? GO:0002523 ... P05109 27251136
    24759 5hlv:D (2.2) BS03 CA ? GO:0002523 ... P05109 27251136
    24760 5hlv:D (2.2) BS04 CA ? GO:0002523 ... P05109 27251136
    24761 5hlv:E (2.2) BS03 CA ? GO:0002523 ... P05109 27251136
    24762 5hlv:E (2.2) BS04 CA ? GO:0002523 ... P05109 27251136
    24763 5hlv:F (2.2) BS01 CA ? GO:0002523 ... P05109 27251136
    24764 5hlv:F (2.2) BS02 CA ? GO:0002523 ... P05109 27251136
    24765 5hlv:G (2.2) BS02 CA ? GO:0002523 ... P05109 27251136
    24766 5hlv:G (2.2) BS03 CA ? GO:0002523 ... P05109 27251136
    24767 5hlv:H (2.2) BS03 CA ? GO:0002523 ... P05109 27251136
    24768 5hlv:H (2.2) BS04 CA ? GO:0002523 ... P05109 27251136
    24769 5hm4:B (2.0) BS01 CA ? GO:0015833 ... Q9X0V3 28876049
    24770 5ho0:A (2.35) BS01 CA ? GO:0004553 ... B3EYN2 N/A
    24771 5ho2:A (2.37) BS01 CA ? GO:0004553 ... B3EYN2 N/A
    24772 5hof:A (2.96) BS04 CA ? GO:0004553 ... B3EYN2 N/A
    24773 5hoh:D (2.0) BS01 CA 4.6.1.24 GO:0001411 ... P00651 10211818
    24774 5hon:A (2.001) BS03 CA ? N/A B3EYN2 N/A
    24775 5hon:B (2.001) BS04 CA ? N/A B3EYN2 N/A
    24776 5hp4:A (1.86) BS02 CA 3.1.11.-
    3.1.11.3
    GO:0003677 ... P06229 27273516
    24777 5hp5:A (3.198) BS01 CA 3.5.3.15 GO:0004668 ... Q9ULC6 27393304
    24778 5hp5:A (3.198) BS02 CA 3.5.3.15 GO:0004668 ... Q9ULC6 27393304
    24779 5hp5:A (3.198) BS03 CA 3.5.3.15 GO:0004668 ... Q9ULC6 27393304
    24780 5hp5:A (3.198) BS04 CA 3.5.3.15 GO:0004668 ... Q9ULC6 27393304
    24781 5hp5:B (3.198) BS01 CA 3.5.3.15 GO:0004668 ... Q9ULC6 27393304
    24782 5hp5:B (3.198) BS02 CA 3.5.3.15 GO:0004668 ... Q9ULC6 27393304
    24783 5hp5:B (3.198) BS03 CA 3.5.3.15 GO:0004668 ... Q9ULC6 27393304
    24784 5hp5:B (3.198) BS04 CA 3.5.3.15 GO:0004668 ... Q9ULC6 27393304
    24785 5hp6:A (2.093) BS01 CA ? GO:0004553 ... B3EYN2 N/A
    24786 5hpo:A (1.8) BS05 CA ? GO:0003824 ... Q8Y4J2 28089449
    24787 5hpw:A (2.5) BS01 CA 1.11.1.7 GO:0004601 ... A0A452E9Y6 N/A
    24788 5hpw:B (2.5) BS01 CA 1.11.1.7 GO:0004601 ... A0A452E9Y6 N/A
    24789 5hpw:C (2.5) BS01 CA 1.11.1.7 GO:0004601 ... A0A452E9Y6 N/A
    24790 5hpw:D (2.5) BS01 CA 1.11.1.7 GO:0004601 ... A0A452E9Y6 N/A
    24791 5hq4:A (1.926) BS01 CA ? GO:0030246 ... A0A0Y0DFX2 27645700
    24792 5hqa:A (1.747) BS03 CA ? GO:0030246 ... A0A0Y0DFX2 27645700
    24793 5hqb:A (1.8) BS03 CA ? GO:0030246 ... A0A0Y0DFX2 27645700
    24794 5hqc:A (2.001) BS02 CA ? GO:0030246 ... A0A0Y0DFX2 27645700
    24795 5hqd:A (2.52) BS01 CA 3.4.24.- GO:0004222 ... V5IRV7 26996959
    24796 5hqd:A (2.52) BS02 CA 3.4.24.- GO:0004222 ... V5IRV7 26996959
    24797 5hqd:A (2.52) BS03 CA 3.4.24.- GO:0004222 ... V5IRV7 26996959
    24798 5hqd:A (2.52) BS04 CA 3.4.24.- GO:0004222 ... V5IRV7 26996959
    24799 5hr4:C (2.5964) BS03 CA 2.1.1.72 GO:0008168 ... B2MU09 27082731
    24800 5hr4:J (2.5964) BS03 CA 2.1.1.72 GO:0008168 ... B2MU09 27082731

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218