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BioLiP
Download all results in tab-seperated text for 3964 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    3801 8xpk:B (2.0) BS02 BGC N/A N/A N/A N/A
    3802 8xpk:B (2.0) BS03 BGC N/A N/A N/A N/A
    3803 8xrv:A (2.4) BS01 BGC N/A GO:0004553 ... N/A 38527679
    3804 8xrv:B (2.4) BS01 BGC N/A GO:0004553 ... N/A 38527679
    3805 8xrv:C (2.4) BS01 BGC N/A GO:0004553 ... N/A 38527679
    3806 8xrv:D (2.4) BS01 BGC N/A GO:0004553 ... N/A 38527679
    3807 8xrv:E (2.4) BS01 BGC N/A GO:0004553 ... N/A 38527679
    3808 8xrv:F (2.4) BS01 BGC N/A GO:0004553 ... N/A 38527679
    3809 8xrx:A (2.5) BS01 BGC N/A GO:0004553 ... N/A 38527679
    3810 8xrx:A (2.5) BS02 BGC N/A GO:0004553 ... N/A 38527679
    3811 8xrx:B (2.5) BS01 BGC N/A GO:0004553 ... N/A 38527679
    3812 8xrx:C (2.5) BS01 BGC N/A GO:0004553 ... N/A 38527679
    3813 8xrx:D (2.5) BS01 BGC N/A GO:0004553 ... N/A 38527679
    3814 8xrx:F (2.5) BS01 BGC N/A GO:0004553 ... N/A 38527679
    3815 8xxa:A (1.55) BS01 BGC 3.2.1.1 GO:0005975 ... D0MDJ8 38641972
    3816 8zrz:A (1.26) BS05 BGC N/A N/A P36924 N/A
    3817 8zrz:A (1.26) BS12 BGC N/A N/A P36924 N/A
    3818 9eq7:A (3.23) BS01 BGC N/A N/A N/A 38992036
    3819 9eq7:A (3.23) BS02 BGC N/A N/A N/A 38992036
    3820 9eq7:B (3.23) BS01 BGC N/A N/A N/A 38992036
    3821 9eq7:B (3.23) BS02 BGC N/A N/A N/A 38992036
    3822 9eq7:C (3.23) BS01 BGC N/A N/A N/A 38992036
    3823 9eq7:C (3.23) BS02 BGC N/A N/A N/A 38992036
    3824 9eq7:D (3.23) BS01 BGC N/A N/A N/A 38992036
    3825 9eq7:D (3.23) BS02 BGC N/A N/A N/A 38992036
    3826 9eq7:E (3.23) BS01 BGC N/A N/A N/A 38992036
    3827 9eq7:E (3.23) BS02 BGC N/A N/A N/A 38992036
    3828 9eq7:F (3.23) BS01 BGC N/A N/A N/A 38992036
    3829 9eq7:F (3.23) BS02 BGC N/A N/A N/A 38992036
    3830 9eq7:G (3.23) BS01 BGC N/A N/A N/A 38992036
    3831 9eq7:G (3.23) BS02 BGC N/A N/A N/A 38992036
    3832 9eq7:H (3.23) BS01 BGC N/A N/A N/A 38992036
    3833 9eq7:H (3.23) BS02 BGC N/A N/A N/A 38992036
    3834 9eq7:I (3.23) BS01 BGC N/A N/A N/A 38992036
    3835 9eq7:I (3.23) BS03 BGC N/A N/A N/A 38992036
    3836 9eq7:J (3.23) BS01 BGC N/A N/A N/A 38992036
    3837 9eq7:J (3.23) BS02 BGC N/A N/A N/A 38992036
    3838 9eq7:K (3.23) BS01 BGC N/A N/A N/A 38992036
    3839 9eq7:K (3.23) BS02 BGC N/A N/A N/A 38992036
    3840 9eq7:L (3.23) BS01 BGC N/A N/A N/A 38992036
    3841 9eq7:L (3.23) BS02 BGC N/A N/A N/A 38992036
    3842 9eq7:M (3.23) BS01 BGC N/A N/A N/A 38992036
    3843 9eq7:M (3.23) BS02 BGC N/A N/A N/A 38992036
    3844 9eq7:N (3.23) BS01 BGC N/A N/A N/A 38992036
    3845 9eq7:N (3.23) BS02 BGC N/A N/A N/A 38992036
    3846 9eq7:O (3.23) BS01 BGC N/A N/A N/A 38992036
    3847 9eq7:O (3.23) BS02 BGC N/A N/A N/A 38992036
    3848 9eq7:P (3.23) BS01 BGC N/A N/A N/A 38992036
    3849 9eq7:P (3.23) BS02 BGC N/A N/A N/A 38992036
    3850 9eq7:Q (3.23) BS01 BGC N/A N/A N/A 38992036
    3851 9eq7:Q (3.23) BS02 BGC N/A N/A N/A 38992036
    3852 9eq7:R (3.23) BS01 BGC N/A N/A N/A 38992036
    3853 9eq7:R (3.23) BS02 BGC N/A N/A N/A 38992036
    3854 9eq7:S (3.23) BS01 BGC N/A N/A N/A 38992036
    3855 9eq7:S (3.23) BS02 BGC N/A N/A N/A 38992036
    3856 9eq7:T (3.23) BS01 BGC N/A N/A N/A 38992036
    3857 9eq7:T (3.23) BS02 BGC N/A N/A N/A 38992036
    3858 9eq7:U (3.23) BS01 BGC N/A N/A N/A 38992036
    3859 9eq7:U (3.23) BS02 BGC N/A N/A N/A 38992036
    3860 9eq7:V (3.23) BS01 BGC N/A N/A N/A 38992036
    3861 9eq7:V (3.23) BS02 BGC N/A N/A N/A 38992036
    3862 9eq7:W (3.23) BS01 BGC N/A N/A N/A 38992036
    3863 9eq7:W (3.23) BS02 BGC N/A N/A N/A 38992036
    3864 9eq7:X (3.23) BS01 BGC N/A N/A N/A 38992036
    3865 9eq7:X (3.23) BS02 BGC N/A N/A N/A 38992036
    3866 9eq7:Y (3.23) BS01 BGC N/A N/A N/A 38992036
    3867 9eq7:Y (3.23) BS02 BGC N/A N/A N/A 38992036
    3868 9eq7:Z (3.23) BS01 BGC N/A N/A N/A 38992036
    3869 9eq7:Z (3.23) BS02 BGC N/A N/A N/A 38992036
    3870 9esm:A (3.06) BS01 BGC N/A N/A N/A 38992036
    3871 9esm:A (3.06) BS02 BGC N/A N/A N/A 38992036
    3872 9esm:B (3.06) BS01 BGC N/A N/A N/A 38992036
    3873 9esm:C (3.06) BS01 BGC N/A N/A N/A 38992036
    3874 9esm:D (3.06) BS01 BGC N/A N/A N/A 38992036
    3875 9esm:E (3.06) BS01 BGC N/A N/A N/A 38992036
    3876 9esm:E (3.06) BS02 BGC N/A N/A N/A 38992036
    3877 9esm:F (3.06) BS01 BGC N/A N/A N/A 38992036
    3878 9esm:G (3.06) BS01 BGC N/A N/A N/A 38992036
    3879 9esm:G (3.06) BS03 BGC N/A N/A N/A 38992036
    3880 9esm:H (3.06) BS01 BGC N/A N/A N/A 38992036
    3881 9esm:H (3.06) BS02 BGC N/A N/A N/A 38992036
    3882 9esm:I (3.06) BS01 BGC N/A N/A N/A 38992036
    3883 9esm:I (3.06) BS02 BGC N/A N/A N/A 38992036
    3884 9esm:J (3.06) BS01 BGC N/A N/A N/A 38992036
    3885 9esm:J (3.06) BS02 BGC N/A N/A N/A 38992036
    3886 9esm:K (3.06) BS02 BGC N/A N/A N/A 38992036
    3887 9esm:K (3.06) BS03 BGC N/A N/A N/A 38992036
    3888 9esm:L (3.06) BS01 BGC N/A N/A N/A 38992036
    3889 9esm:L (3.06) BS02 BGC N/A N/A N/A 38992036
    3890 9esm:M (3.06) BS01 BGC N/A N/A N/A 38992036
    3891 9esm:N (3.06) BS02 BGC N/A N/A N/A 38992036
    3892 9esm:N (3.06) BS03 BGC N/A N/A N/A 38992036
    3893 9esm:O (3.06) BS01 BGC N/A N/A N/A 38992036
    3894 9esm:O (3.06) BS02 BGC N/A N/A N/A 38992036
    3895 9esm:P (3.06) BS01 BGC N/A N/A N/A 38992036
    3896 9esm:P (3.06) BS02 BGC N/A N/A N/A 38992036
    3897 9esm:Q (3.06) BS02 BGC N/A N/A N/A 38992036
    3898 9esm:Q (3.06) BS03 BGC N/A N/A N/A 38992036
    3899 9esm:R (3.06) BS01 BGC N/A N/A N/A 38992036
    3900 9esm:R (3.06) BS02 BGC N/A N/A N/A 38992036
    3901 9esm:S (3.06) BS01 BGC N/A N/A N/A 38992036
    3902 9esm:S (3.06) BS02 BGC N/A N/A N/A 38992036
    3903 9esm:T (3.06) BS01 BGC N/A N/A N/A 38992036
    3904 9esm:U (3.06) BS01 BGC N/A N/A N/A 38992036
    3905 9esm:U (3.06) BS02 BGC N/A N/A N/A 38992036
    3906 9esm:V (3.06) BS01 BGC N/A N/A N/A 38992036
    3907 9esm:V (3.06) BS02 BGC N/A N/A N/A 38992036
    3908 9esm:W (3.06) BS01 BGC N/A N/A N/A 38992036
    3909 9esm:W (3.06) BS02 BGC N/A N/A N/A 38992036
    3910 9esm:X (3.06) BS02 BGC N/A N/A N/A 38992036
    3911 9esm:X (3.06) BS03 BGC N/A N/A N/A 38992036
    3912 9esm:Y (3.06) BS01 BGC N/A N/A N/A 38992036
    3913 9esm:Y (3.06) BS02 BGC N/A N/A N/A 38992036
    3914 9etu:A (3.33) BS01 BGC N/A N/A N/A 38992036
    3915 9etu:A (3.33) BS02 BGC N/A N/A N/A 38992036
    3916 9etu:B (3.33) BS01 BGC N/A N/A N/A 38992036
    3917 9etu:B (3.33) BS02 BGC N/A N/A N/A 38992036
    3918 9etu:C (3.33) BS01 BGC N/A N/A N/A 38992036
    3919 9etu:C (3.33) BS02 BGC N/A N/A N/A 38992036
    3920 9etu:D (3.33) BS01 BGC N/A N/A N/A 38992036
    3921 9etu:D (3.33) BS02 BGC N/A N/A N/A 38992036
    3922 9etu:E (3.33) BS01 BGC N/A N/A N/A 38992036
    3923 9etu:E (3.33) BS02 BGC N/A N/A N/A 38992036
    3924 9etu:F (3.33) BS01 BGC N/A N/A N/A 38992036
    3925 9etu:F (3.33) BS02 BGC N/A N/A N/A 38992036
    3926 9etu:G (3.33) BS01 BGC N/A N/A N/A 38992036
    3927 9etu:G (3.33) BS02 BGC N/A N/A N/A 38992036
    3928 9etu:H (3.33) BS01 BGC N/A N/A N/A 38992036
    3929 9etu:H (3.33) BS02 BGC N/A N/A N/A 38992036
    3930 9etu:I (3.33) BS01 BGC N/A N/A N/A 38992036
    3931 9etu:I (3.33) BS02 BGC N/A N/A N/A 38992036
    3932 9etu:J (3.33) BS01 BGC N/A N/A N/A 38992036
    3933 9etu:J (3.33) BS02 BGC N/A N/A N/A 38992036
    3934 9etu:K (3.33) BS01 BGC N/A N/A N/A 38992036
    3935 9etu:K (3.33) BS02 BGC N/A N/A N/A 38992036
    3936 9etu:L (3.33) BS01 BGC N/A N/A N/A 38992036
    3937 9etu:L (3.33) BS02 BGC N/A N/A N/A 38992036
    3938 9etu:M (3.33) BS01 BGC N/A N/A N/A 38992036
    3939 9etu:N (3.33) BS01 BGC N/A N/A N/A 38992036
    3940 9etu:N (3.33) BS02 BGC N/A N/A N/A 38992036
    3941 9etu:O (3.33) BS01 BGC N/A N/A N/A 38992036
    3942 9etu:O (3.33) BS02 BGC N/A N/A N/A 38992036
    3943 9etu:P (3.33) BS01 BGC N/A N/A N/A 38992036
    3944 9etu:P (3.33) BS02 BGC N/A N/A N/A 38992036
    3945 9etu:Q (3.33) BS01 BGC N/A N/A N/A 38992036
    3946 9etu:Q (3.33) BS02 BGC N/A N/A N/A 38992036
    3947 9etu:R (3.33) BS01 BGC N/A N/A N/A 38992036
    3948 9etu:S (3.33) BS01 BGC N/A N/A N/A 38992036
    3949 9etu:S (3.33) BS02 BGC N/A N/A N/A 38992036
    3950 9etu:T (3.33) BS01 BGC N/A N/A N/A 38992036
    3951 9etu:T (3.33) BS02 BGC N/A N/A N/A 38992036
    3952 9etu:U (3.33) BS01 BGC N/A N/A N/A 38992036
    3953 9etu:U (3.33) BS02 BGC N/A N/A N/A 38992036
    3954 9etu:V (3.33) BS01 BGC N/A N/A N/A 38992036
    3955 9etu:V (3.33) BS02 BGC N/A N/A N/A 38992036
    3956 9etu:W (3.33) BS01 BGC N/A N/A N/A 38992036
    3957 9etu:W (3.33) BS02 BGC N/A N/A N/A 38992036
    3958 9etu:X (3.33) BS01 BGC N/A N/A N/A 38992036
    3959 9etu:X (3.33) BS02 BGC N/A N/A N/A 38992036
    3960 9etu:Y (3.33) BS01 BGC N/A N/A N/A 38992036
    3961 9etu:Y (3.33) BS02 BGC N/A N/A N/A 38992036
    3962 9g11:A (3.2) BS01 BGC N/A N/A Q9SFG0 N/A
    3963 9j9a:A (1.75) BS01 BGC N/A N/A Q8GAX8 39276694
    3964 9j9a:A (1.75) BS02 BGC N/A N/A Q8GAX8 39276694
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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