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BioLiP
Download all results in tab-seperated text for 6160 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    6001 8vtn:M (3.57) BS01 BCL ? GO:0009772 ... P0C0Y9 N/A
    6002 8vtn:M (3.57) BS02 BCL ? GO:0009772 ... P0C0Y9 N/A
    6003 8vtn:M (3.57) BS07 BCL ? GO:0009772 ... P0C0Y9 N/A
    6004 8vto:L (3.09) BS02 BCL ? GO:0009772 ... P0C0Y8 N/A
    6005 8vto:L (3.09) BS04 BCL ? GO:0009772 ... P0C0Y8 N/A
    6006 8vto:L (3.09) BS06 BCL ? GO:0009772 ... P0C0Y8 N/A
    6007 8vto:M (3.09) BS02 BCL ? GO:0009772 ... P0C0Y9 N/A
    6008 8vto:M (3.09) BS04 BCL ? GO:0009772 ... P0C0Y9 N/A
    6009 8vto:M (3.09) BS07 BCL ? GO:0009772 ... P0C0Y9 N/A
    6010 8wdu:0 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    6011 8wdu:0 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    6012 8wdu:1 (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    6013 8wdu:1 (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    6014 8wdu:2 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    6015 8wdu:2 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    6016 8wdu:3 (2.24) BS03 BCL ? GO:0005886 ... D3RP67 38347078
    6017 8wdu:3 (2.24) BS04 BCL ? GO:0005886 ... D3RP67 38347078
    6018 8wdu:3 (2.24) BS06 BCL ? GO:0005886 ... D3RP67 38347078
    6019 8wdu:4 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    6020 8wdu:4 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    6021 8wdu:5 (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    6022 8wdu:5 (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    6023 8wdu:6 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    6024 8wdu:6 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    6025 8wdu:7 (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    6026 8wdu:7 (2.24) BS04 BCL ? GO:0005886 ... D3RP69 38347078
    6027 8wdu:7 (2.24) BS06 BCL ? GO:0005886 ... D3RP69 38347078
    6028 8wdu:8 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    6029 8wdu:8 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    6030 8wdu:9 (2.24) BS04 BCL ? GO:0005886 ... D3RP69 38347078
    6031 8wdu:9 (2.24) BS05 BCL ? GO:0005886 ... D3RP69 38347078
    6032 8wdu:A (2.24) BS01 BCL ? GO:0005886 ... D3RP69 38347078
    6033 8wdu:A (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    6034 8wdu:B (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    6035 8wdu:B (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    6036 8wdu:D (2.24) BS02 BCL ? GO:0005886 ... D3RP74 38347078
    6037 8wdu:D (2.24) BS04 BCL ? GO:0005886 ... D3RP74 38347078
    6038 8wdu:E (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    6039 8wdu:E (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    6040 8wdu:F (2.24) BS02 BCL ? GO:0005886 ... D3RP74 38347078
    6041 8wdu:F (2.24) BS04 BCL ? GO:0005886 ... D3RP74 38347078
    6042 8wdu:F (2.24) BS06 BCL ? GO:0005886 ... D3RP74 38347078
    6043 8wdu:G (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    6044 8wdu:G (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    6045 8wdu:I (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    6046 8wdu:I (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    6047 8wdu:J (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    6048 8wdu:J (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    6049 8wdu:K (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    6050 8wdu:K (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    6051 8wdu:L (2.24) BS01 BCL ? GO:0009772 ... P51762 38347078
    6052 8wdu:L (2.24) BS05 BCL ? GO:0009772 ... P51762 38347078
    6053 8wdu:L (2.24) BS08 BCL ? GO:0009772 ... P51762 38347078
    6054 8wdu:M (2.24) BS02 BCL ? GO:0009772 ... P51763 38347078
    6055 8wdu:M (2.24) BS05 BCL ? GO:0009772 ... P51763 38347078
    6056 8wdu:M (2.24) BS06 BCL ? GO:0009772 ... P51763 38347078
    6057 8wdu:N (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    6058 8wdu:N (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    6059 8wdu:O (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    6060 8wdu:O (2.24) BS04 BCL ? GO:0005886 ... D3RP69 38347078
    6061 8wdu:P (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    6062 8wdu:P (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    6063 8wdu:Q (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    6064 8wdu:Q (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    6065 8wdu:Q (2.24) BS05 BCL ? GO:0005886 ... D3RP69 38347078
    6066 8wdu:R (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    6067 8wdu:R (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    6068 8wdu:S (2.24) BS02 BCL ? GO:0005886 ... D3RP74 38347078
    6069 8wdu:S (2.24) BS04 BCL ? GO:0005886 ... D3RP74 38347078
    6070 8wdu:T (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    6071 8wdu:T (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    6072 8wdu:U (2.24) BS03 BCL ? GO:0005886 ... D3RP74 38347078
    6073 8wdu:U (2.24) BS05 BCL ? GO:0005886 ... D3RP74 38347078
    6074 8wdu:V (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    6075 8wdu:V (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    6076 8wdu:W (2.24) BS03 BCL ? GO:0005886 ... D3RP74 38347078
    6077 8wdu:W (2.24) BS05 BCL ? GO:0005886 ... D3RP74 38347078
    6078 8wdu:X (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    6079 8wdu:X (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    6080 8wdu:Y (2.24) BS02 BCL ? GO:0005886 ... D3RP74 38347078
    6081 8wdu:Y (2.24) BS04 BCL ? GO:0005886 ... D3RP74 38347078
    6082 8wdu:Y (2.24) BS06 BCL ? GO:0005886 ... D3RP74 38347078
    6083 8wdu:Z (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    6084 8wdu:Z (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    6085 8wdv:0 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    6086 8wdv:0 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    6087 8wdv:1 (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    6088 8wdv:1 (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    6089 8wdv:2 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    6090 8wdv:2 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    6091 8wdv:3 (2.24) BS02 BCL ? GO:0005886 ... D3RP67 38347078
    6092 8wdv:3 (2.24) BS03 BCL ? GO:0005886 ... D3RP67 38347078
    6093 8wdv:3 (2.24) BS05 BCL ? GO:0005886 ... D3RP67 38347078
    6094 8wdv:4 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    6095 8wdv:4 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    6096 8wdv:5 (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    6097 8wdv:5 (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    6098 8wdv:6 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    6099 8wdv:6 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    6100 8wdv:7 (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    6101 8wdv:7 (2.24) BS04 BCL ? GO:0005886 ... D3RP69 38347078
    6102 8wdv:8 (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    6103 8wdv:8 (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    6104 8wdv:9 (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    6105 8wdv:9 (2.24) BS04 BCL ? GO:0005886 ... D3RP69 38347078
    6106 8wdv:A (2.24) BS01 BCL ? GO:0005886 ... D3RP69 38347078
    6107 8wdv:A (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    6108 8wdv:B (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    6109 8wdv:B (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    6110 8wdv:D (2.24) BS02 BCL ? GO:0005886 ... D3RP74 38347078
    6111 8wdv:D (2.24) BS04 BCL ? GO:0005886 ... D3RP74 38347078
    6112 8wdv:E (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    6113 8wdv:E (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    6114 8wdv:F (2.24) BS02 BCL ? GO:0005886 ... D3RP74 38347078
    6115 8wdv:F (2.24) BS04 BCL ? GO:0005886 ... D3RP74 38347078
    6116 8wdv:F (2.24) BS06 BCL ? GO:0005886 ... D3RP74 38347078
    6117 8wdv:G (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    6118 8wdv:G (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    6119 8wdv:I (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    6120 8wdv:I (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    6121 8wdv:I (2.24) BS05 BCL ? GO:0005886 ... D3RP69 38347078
    6122 8wdv:J (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    6123 8wdv:J (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    6124 8wdv:K (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    6125 8wdv:K (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    6126 8wdv:K (2.24) BS05 BCL ? GO:0005886 ... D3RP69 38347078
    6127 8wdv:L (2.24) BS02 BCL ? GO:0009772 ... P51762 38347078
    6128 8wdv:L (2.24) BS06 BCL ? GO:0009772 ... P51762 38347078
    6129 8wdv:L (2.24) BS09 BCL ? GO:0009772 ... P51762 38347078
    6130 8wdv:M (2.24) BS02 BCL ? GO:0009772 ... P51763 38347078
    6131 8wdv:M (2.24) BS05 BCL ? GO:0009772 ... P51763 38347078
    6132 8wdv:M (2.24) BS06 BCL ? GO:0009772 ... P51763 38347078
    6133 8wdv:N (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    6134 8wdv:N (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    6135 8wdv:O (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    6136 8wdv:O (2.24) BS04 BCL ? GO:0005886 ... D3RP69 38347078
    6137 8wdv:P (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    6138 8wdv:P (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    6139 8wdv:Q (2.24) BS02 BCL ? GO:0005886 ... D3RP69 38347078
    6140 8wdv:Q (2.24) BS03 BCL ? GO:0005886 ... D3RP69 38347078
    6141 8wdv:Q (2.24) BS05 BCL ? GO:0005886 ... D3RP69 38347078
    6142 8wdv:R (2.24) BS01 BCL ? GO:0005886 ... D3RP75 38347078
    6143 8wdv:R (2.24) BS02 BCL ? GO:0005886 ... D3RP75 38347078
    6144 8wdv:S (2.24) BS02 BCL ? GO:0005886 ... D3RP74 38347078
    6145 8wdv:S (2.24) BS04 BCL ? GO:0005886 ... D3RP74 38347078
    6146 8wdv:T (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    6147 8wdv:T (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    6148 8wdv:U (2.24) BS02 BCL ? GO:0005886 ... D3RP74 38347078
    6149 8wdv:U (2.24) BS04 BCL ? GO:0005886 ... D3RP74 38347078
    6150 8wdv:V (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    6151 8wdv:V (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    6152 8wdv:W (2.24) BS03 BCL ? GO:0005886 ... D3RP74 38347078
    6153 8wdv:W (2.24) BS05 BCL ? GO:0005886 ... D3RP74 38347078
    6154 8wdv:X (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    6155 8wdv:X (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    6156 8wdv:Y (2.24) BS02 BCL ? GO:0005886 ... D3RP74 38347078
    6157 8wdv:Y (2.24) BS04 BCL ? GO:0005886 ... D3RP74 38347078
    6158 8wdv:Z (2.24) BS01 BCL ? GO:0005886 ... D3RP68 38347078
    6159 8wdv:Z (2.24) BS02 BCL ? GO:0005886 ... D3RP68 38347078
    6160 8wdv:Z (2.24) BS04 BCL ? GO:0005886 ... D3RP68 38347078
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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