Home Research COVID-19 Services Publications People Teaching Job Opening News Forum Lab Only
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 6160 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
  • Sort results by
    << < 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 > >>
    Go to page

    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    4001 7vny:Q (2.79) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    4002 7vny:Q (2.79) BS04 BCL ? GO:0005886 ... Q3J1A4 35418573
    4003 7vny:R (2.79) BS03 BCL ? GO:0005886 ... Q3J1A3 35418573
    4004 7vny:R (2.79) BS04 BCL ? GO:0005886 ... Q3J1A3 35418573
    4005 7vny:R (2.79) BS05 BCL ? GO:0005886 ... Q3J1A3 35418573
    4006 7vny:S (2.79) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    4007 7vny:S (2.79) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    4008 7vny:T (2.79) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    4009 7vny:T (2.79) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    4010 7vny:U (2.79) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    4011 7vny:U (2.79) BS04 BCL ? GO:0005886 ... Q3J1A4 35418573
    4012 7vny:V (2.79) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    4013 7vny:V (2.79) BS03 BCL ? GO:0005886 ... Q3J1A3 35418573
    4014 7vny:W (2.79) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    4015 7vny:W (2.79) BS04 BCL ? GO:0005886 ... Q3J1A4 35418573
    4016 7vny:Z (2.79) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    4017 7vny:Z (2.79) BS03 BCL ? GO:0005886 ... Q3J1A3 35418573
    4018 7vor:0 (2.74) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    4019 7vor:0 (2.74) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    4020 7vor:0 (2.74) BS04 BCL ? GO:0005886 ... Q3J1A3 35418573
    4021 7vor:1 (2.74) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    4022 7vor:1 (2.74) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    4023 7vor:2 (2.74) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    4024 7vor:2 (2.74) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    4025 7vor:3 (2.74) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    4026 7vor:3 (2.74) BS04 BCL ? GO:0005886 ... Q3J1A4 35418573
    4027 7vor:4 (2.74) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    4028 7vor:4 (2.74) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    4029 7vor:5 (2.74) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    4030 7vor:5 (2.74) BS04 BCL ? GO:0005886 ... Q3J1A4 35418573
    4031 7vor:6 (2.74) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    4032 7vor:6 (2.74) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    4033 7vor:6 (2.74) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    4034 7vor:7 (2.74) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    4035 7vor:7 (2.74) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    4036 7vor:7 (2.74) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    4037 7vor:8 (2.74) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    4038 7vor:8 (2.74) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    4039 7vor:8 (2.74) BS03 BCL ? GO:0005886 ... Q3J1A3 35418573
    4040 7vor:9 (2.74) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    4041 7vor:9 (2.74) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    4042 7vor:9 (2.74) BS05 BCL ? GO:0005886 ... Q3J1A4 35418573
    4043 7vor:A (2.74) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    4044 7vor:A (2.74) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    4045 7vor:A (2.74) BS04 BCL ? GO:0005886 ... Q3J1A4 35418573
    4046 7vor:B (2.74) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    4047 7vor:B (2.74) BS03 BCL ? GO:0005886 ... Q3J1A3 35418573
    4048 7vor:B (2.74) BS05 BCL ? GO:0005886 ... Q3J1A3 35418573
    4049 7vor:C (2.74) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    4050 7vor:C (2.74) BS03 BCL ? GO:0005886 ... Q3J1A3 35418573
    4051 7vor:D (2.74) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    4052 7vor:D (2.74) BS04 BCL ? GO:0005886 ... Q3J1A4 35418573
    4053 7vor:D (2.74) BS05 BCL ? GO:0005886 ... Q3J1A4 35418573
    4054 7vor:E (2.74) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    4055 7vor:E (2.74) BS04 BCL ? GO:0005886 ... Q3J1A3 35418573
    4056 7vor:E (2.74) BS05 BCL ? GO:0005886 ... Q3J1A3 35418573
    4057 7vor:F (2.74) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    4058 7vor:F (2.74) BS04 BCL ? GO:0005886 ... Q3J1A4 35418573
    4059 7vor:G (2.74) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    4060 7vor:G (2.74) BS04 BCL ? GO:0005886 ... Q3J1A3 35418573
    4061 7vor:G (2.74) BS05 BCL ? GO:0005886 ... Q3J1A3 35418573
    4062 7vor:I (2.74) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    4063 7vor:I (2.74) BS04 BCL ? GO:0005886 ... Q3J1A4 35418573
    4064 7vor:I (2.74) BS05 BCL ? GO:0005886 ... Q3J1A4 35418573
    4065 7vor:J (2.74) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    4066 7vor:J (2.74) BS04 BCL ? GO:0005886 ... Q3J1A3 35418573
    4067 7vor:J (2.74) BS05 BCL ? GO:0005886 ... Q3J1A3 35418573
    4068 7vor:K (2.74) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    4069 7vor:K (2.74) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    4070 7vor:K (2.74) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    4071 7vor:L (2.74) BS01 BCL ? GO:0009772 ... Q3J1A5 35418573
    4072 7vor:L (2.74) BS02 BCL ? GO:0009772 ... Q3J1A5 35418573
    4073 7vor:L (2.74) BS07 BCL ? GO:0009772 ... Q3J1A5 35418573
    4074 7vor:M (2.74) BS01 BCL ? GO:0009772 ... Q3J1A6 35418573
    4075 7vor:M (2.74) BS02 BCL ? GO:0009772 ... Q3J1A6 35418573
    4076 7vor:M (2.74) BS05 BCL ? GO:0009772 ... Q3J1A6 35418573
    4077 7vor:M (2.74) BS06 BCL ? GO:0009772 ... Q3J1A6 35418573
    4078 7vor:N (2.74) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    4079 7vor:N (2.74) BS04 BCL ? GO:0005886 ... Q3J1A3 35418573
    4080 7vor:N (2.74) BS05 BCL ? GO:0005886 ... Q3J1A3 35418573
    4081 7vor:O (2.74) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    4082 7vor:O (2.74) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    4083 7vor:O (2.74) BS04 BCL ? GO:0005886 ... Q3J1A4 35418573
    4084 7vor:P (2.74) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    4085 7vor:P (2.74) BS04 BCL ? GO:0005886 ... Q3J1A3 35418573
    4086 7vor:P (2.74) BS05 BCL ? GO:0005886 ... Q3J1A3 35418573
    4087 7vor:Q (2.74) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    4088 7vor:Q (2.74) BS04 BCL ? GO:0005886 ... Q3J1A4 35418573
    4089 7vor:Q (2.74) BS05 BCL ? GO:0005886 ... Q3J1A4 35418573
    4090 7vor:R (2.74) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    4091 7vor:R (2.74) BS04 BCL ? GO:0005886 ... Q3J1A3 35418573
    4092 7vor:R (2.74) BS05 BCL ? GO:0005886 ... Q3J1A3 35418573
    4093 7vor:S (2.74) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    4094 7vor:S (2.74) BS06 BCL ? GO:0005886 ... Q3J1A4 35418573
    4095 7vor:S (2.74) BS07 BCL ? GO:0005886 ... Q3J1A4 35418573
    4096 7vor:T (2.74) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    4097 7vor:T (2.74) BS04 BCL ? GO:0005886 ... Q3J1A3 35418573
    4098 7vor:T (2.74) BS05 BCL ? GO:0005886 ... Q3J1A3 35418573
    4099 7vor:U (2.74) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    4100 7vor:U (2.74) BS05 BCL ? GO:0005886 ... Q3J1A4 35418573
    4101 7vor:V (2.74) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    4102 7vor:V (2.74) BS04 BCL ? GO:0005886 ... Q3J1A3 35418573
    4103 7vor:W (2.74) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    4104 7vor:W (2.74) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    4105 7vor:Z (2.74) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    4106 7vor:Z (2.74) BS03 BCL ? GO:0005886 ... Q3J1A3 35418573
    4107 7vor:a (2.74) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    4108 7vor:a (2.74) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    4109 7vor:a (2.74) BS04 BCL ? GO:0005886 ... Q3J1A4 35418573
    4110 7vor:b (2.74) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    4111 7vor:b (2.74) BS03 BCL ? GO:0005886 ... Q3J1A3 35418573
    4112 7vor:b (2.74) BS05 BCL ? GO:0005886 ... Q3J1A3 35418573
    4113 7vor:b0 (2.74) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    4114 7vor:b0 (2.74) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    4115 7vor:b0 (2.74) BS04 BCL ? GO:0005886 ... Q3J1A3 35418573
    4116 7vor:b1 (2.74) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    4117 7vor:b1 (2.74) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    4118 7vor:b8 (2.74) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    4119 7vor:b8 (2.74) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    4120 7vor:b8 (2.74) BS03 BCL ? GO:0005886 ... Q3J1A3 35418573
    4121 7vor:b9 (2.74) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    4122 7vor:b9 (2.74) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    4123 7vor:b9 (2.74) BS05 BCL ? GO:0005886 ... Q3J1A4 35418573
    4124 7vor:c (2.74) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    4125 7vor:c (2.74) BS03 BCL ? GO:0005886 ... Q3J1A3 35418573
    4126 7vor:d (2.74) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    4127 7vor:d (2.74) BS04 BCL ? GO:0005886 ... Q3J1A4 35418573
    4128 7vor:d (2.74) BS05 BCL ? GO:0005886 ... Q3J1A4 35418573
    4129 7vor:e (2.74) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    4130 7vor:e (2.74) BS04 BCL ? GO:0005886 ... Q3J1A3 35418573
    4131 7vor:e (2.74) BS05 BCL ? GO:0005886 ... Q3J1A3 35418573
    4132 7vor:f (2.74) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    4133 7vor:f (2.74) BS04 BCL ? GO:0005886 ... Q3J1A4 35418573
    4134 7vor:g (2.74) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    4135 7vor:g (2.74) BS04 BCL ? GO:0005886 ... Q3J1A3 35418573
    4136 7vor:g (2.74) BS05 BCL ? GO:0005886 ... Q3J1A3 35418573
    4137 7vor:i (2.74) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    4138 7vor:i (2.74) BS04 BCL ? GO:0005886 ... Q3J1A4 35418573
    4139 7vor:i (2.74) BS05 BCL ? GO:0005886 ... Q3J1A4 35418573
    4140 7vor:j (2.74) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    4141 7vor:j (2.74) BS04 BCL ? GO:0005886 ... Q3J1A3 35418573
    4142 7vor:j (2.74) BS05 BCL ? GO:0005886 ... Q3J1A3 35418573
    4143 7vor:k (2.74) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    4144 7vor:k (2.74) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    4145 7vor:k (2.74) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    4146 7vor:l (2.74) BS01 BCL ? GO:0009772 ... Q3J1A5 35418573
    4147 7vor:l (2.74) BS02 BCL ? GO:0009772 ... Q3J1A5 35418573
    4148 7vor:l (2.74) BS07 BCL ? GO:0009772 ... Q3J1A5 35418573
    4149 7vor:m (2.74) BS01 BCL ? GO:0009772 ... Q3J1A6 35418573
    4150 7vor:m (2.74) BS02 BCL ? GO:0009772 ... Q3J1A6 35418573
    4151 7vor:m (2.74) BS05 BCL ? GO:0009772 ... Q3J1A6 35418573
    4152 7vor:m (2.74) BS06 BCL ? GO:0009772 ... Q3J1A6 35418573
    4153 7vor:n (2.74) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    4154 7vor:n (2.74) BS04 BCL ? GO:0005886 ... Q3J1A3 35418573
    4155 7vor:n (2.74) BS05 BCL ? GO:0005886 ... Q3J1A3 35418573
    4156 7vor:o (2.74) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    4157 7vor:o (2.74) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    4158 7vor:o (2.74) BS04 BCL ? GO:0005886 ... Q3J1A4 35418573
    4159 7vor:p (2.74) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    4160 7vor:p (2.74) BS04 BCL ? GO:0005886 ... Q3J1A3 35418573
    4161 7vor:p (2.74) BS05 BCL ? GO:0005886 ... Q3J1A3 35418573
    4162 7vor:q (2.74) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    4163 7vor:q (2.74) BS04 BCL ? GO:0005886 ... Q3J1A4 35418573
    4164 7vor:q (2.74) BS05 BCL ? GO:0005886 ... Q3J1A4 35418573
    4165 7vor:r (2.74) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    4166 7vor:r (2.74) BS04 BCL ? GO:0005886 ... Q3J1A3 35418573
    4167 7vor:r (2.74) BS05 BCL ? GO:0005886 ... Q3J1A3 35418573
    4168 7vor:s (2.74) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    4169 7vor:s (2.74) BS06 BCL ? GO:0005886 ... Q3J1A4 35418573
    4170 7vor:s (2.74) BS07 BCL ? GO:0005886 ... Q3J1A4 35418573
    4171 7vor:t (2.74) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    4172 7vor:t (2.74) BS04 BCL ? GO:0005886 ... Q3J1A3 35418573
    4173 7vor:t (2.74) BS05 BCL ? GO:0005886 ... Q3J1A3 35418573
    4174 7vor:u (2.74) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    4175 7vor:u (2.74) BS05 BCL ? GO:0005886 ... Q3J1A4 35418573
    4176 7vor:v (2.74) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    4177 7vor:v (2.74) BS04 BCL ? GO:0005886 ... Q3J1A3 35418573
    4178 7vor:w (2.74) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    4179 7vor:w (2.74) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    4180 7vor:z (2.74) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    4181 7vor:z (2.74) BS03 BCL ? GO:0005886 ... Q3J1A3 35418573
    4182 7vot:0 (2.9) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    4183 7vot:0 (2.9) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    4184 7vot:0 (2.9) BS04 BCL ? GO:0005886 ... Q3J1A3 35418573
    4185 7vot:1 (2.9) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    4186 7vot:1 (2.9) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    4187 7vot:2 (2.9) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    4188 7vot:2 (2.9) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    4189 7vot:3 (2.9) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    4190 7vot:3 (2.9) BS04 BCL ? GO:0005886 ... Q3J1A4 35418573
    4191 7vot:4 (2.9) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    4192 7vot:4 (2.9) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    4193 7vot:5 (2.9) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    4194 7vot:5 (2.9) BS04 BCL ? GO:0005886 ... Q3J1A4 35418573
    4195 7vot:6 (2.9) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    4196 7vot:6 (2.9) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    4197 7vot:6 (2.9) BS04 BCL ? GO:0005886 ... Q3J1A4 35418573
    4198 7vot:7 (2.9) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    4199 7vot:7 (2.9) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    4200 7vot:7 (2.9) BS04 BCL ? GO:0005886 ... Q3J1A4 35418573

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417