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BioLiP
Download all results in tab-seperated text for 6160 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    3601 7ueb:X (3.08) BS01 BCL ? GO:0015979 ... Q46393 36192412
    3602 7ueb:X (3.08) BS02 BCL ? GO:0015979 ... Q46393 36192412
    3603 7ueb:X (3.08) BS03 BCL ? GO:0015979 ... Q46393 36192412
    3604 7ueb:X (3.08) BS04 BCL ? GO:0015979 ... Q46393 36192412
    3605 7ueb:X (3.08) BS05 BCL ? GO:0015979 ... Q46393 36192412
    3606 7ueb:X (3.08) BS06 BCL ? GO:0015979 ... Q46393 36192412
    3607 7ueb:X (3.08) BS07 BCL ? GO:0015979 ... Q46393 36192412
    3608 7ueb:X (3.08) BS08 BCL ? GO:0015979 ... Q46393 36192412
    3609 7ueb:X (3.08) BS09 BCL ? GO:0015979 ... Q46393 36192412
    3610 7ueb:X (3.08) BS10 BCL ? GO:0015979 ... Q46393 36192412
    3611 7ueb:X (3.08) BS11 BCL ? GO:0015979 ... Q46393 36192412
    3612 7ueb:Y (3.08) BS01 BCL ? GO:0015979 ... Q46393 36192412
    3613 7ueb:Y (3.08) BS02 BCL ? GO:0015979 ... Q46393 36192412
    3614 7ueb:Y (3.08) BS03 BCL ? GO:0015979 ... Q46393 36192412
    3615 7ueb:Y (3.08) BS04 BCL ? GO:0015979 ... Q46393 36192412
    3616 7ueb:Y (3.08) BS05 BCL ? GO:0015979 ... Q46393 36192412
    3617 7ueb:Y (3.08) BS06 BCL ? GO:0015979 ... Q46393 36192412
    3618 7ueb:Y (3.08) BS07 BCL ? GO:0015979 ... Q46393 36192412
    3619 7ueb:Y (3.08) BS08 BCL ? GO:0015979 ... Q46393 36192412
    3620 7ueb:Y (3.08) BS09 BCL ? GO:0015979 ... Q46393 36192412
    3621 7ueb:Y (3.08) BS10 BCL ? GO:0015979 ... Q46393 36192412
    3622 7ueb:Y (3.08) BS11 BCL ? GO:0015979 ... Q46393 36192412
    3623 7ueb:Z (3.08) BS01 BCL ? GO:0015979 ... Q46393 36192412
    3624 7ueb:Z (3.08) BS02 BCL ? GO:0015979 ... Q46393 36192412
    3625 7ueb:Z (3.08) BS03 BCL ? GO:0015979 ... Q46393 36192412
    3626 7ueb:Z (3.08) BS04 BCL ? GO:0015979 ... Q46393 36192412
    3627 7ueb:Z (3.08) BS05 BCL ? GO:0015979 ... Q46393 36192412
    3628 7ueb:Z (3.08) BS06 BCL ? GO:0015979 ... Q46393 36192412
    3629 7ueb:Z (3.08) BS07 BCL ? GO:0015979 ... Q46393 36192412
    3630 7ueb:Z (3.08) BS08 BCL ? GO:0015979 ... Q46393 36192412
    3631 7ueb:Z (3.08) BS09 BCL ? GO:0015979 ... Q46393 36192412
    3632 7ueb:Z (3.08) BS10 BCL ? GO:0015979 ... Q46393 36192412
    3633 7ueb:Z (3.08) BS11 BCL ? GO:0015979 ... Q46393 36192412
    3634 7ueb:a (3.08) BS07 BCL ? GO:0009579 ... Q8KAY0 36192412
    3635 7ueb:a (3.08) BS08 BCL ? GO:0009579 ... Q8KAY0 36192412
    3636 7ueb:a (3.08) BS09 BCL ? GO:0009579 ... Q8KAY0 36192412
    3637 7ueb:a (3.08) BS10 BCL ? GO:0009579 ... Q8KAY0 36192412
    3638 7ueb:a (3.08) BS11 BCL ? GO:0009579 ... Q8KAY0 36192412
    3639 7ueb:a (3.08) BS12 BCL ? GO:0009579 ... Q8KAY0 36192412
    3640 7ueb:a (3.08) BS13 BCL ? GO:0009579 ... Q8KAY0 36192412
    3641 7ueb:a (3.08) BS14 BCL ? GO:0009579 ... Q8KAY0 36192412
    3642 7ueb:a (3.08) BS15 BCL ? GO:0009579 ... Q8KAY0 36192412
    3643 7ueb:a (3.08) BS16 BCL ? GO:0009579 ... Q8KAY0 36192412
    3644 7ueb:a (3.08) BS17 BCL ? GO:0009579 ... Q8KAY0 36192412
    3645 7ueb:a (3.08) BS18 BCL ? GO:0009579 ... Q8KAY0 36192412
    3646 7ueb:c (3.08) BS01 BCL ? GO:0005886 ... O07091 36192412
    3647 7ueb:c (3.08) BS02 BCL ? GO:0005886 ... O07091 36192412
    3648 7ueb:c (3.08) BS03 BCL ? GO:0005886 ... O07091 36192412
    3649 7va9:0 (3.08) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    3650 7va9:0 (3.08) BS03 BCL ? GO:0005886 ... Q3J1A3 35418573
    3651 7va9:1 (3.08) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    3652 7va9:1 (3.08) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    3653 7va9:1 (3.08) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    3654 7va9:2 (3.08) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    3655 7va9:2 (3.08) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    3656 7va9:3 (3.08) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    3657 7va9:3 (3.08) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    3658 7va9:3 (3.08) BS05 BCL ? GO:0005886 ... Q3J1A4 35418573
    3659 7va9:4 (3.08) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    3660 7va9:4 (3.08) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    3661 7va9:5 (3.08) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    3662 7va9:5 (3.08) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    3663 7va9:6 (3.08) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    3664 7va9:6 (3.08) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    3665 7va9:7 (3.08) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    3666 7va9:7 (3.08) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    3667 7va9:8 (3.08) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    3668 7va9:8 (3.08) BS03 BCL ? GO:0005886 ... Q3J1A3 35418573
    3669 7va9:9 (3.08) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    3670 7va9:9 (3.08) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    3671 7va9:9 (3.08) BS05 BCL ? GO:0005886 ... Q3J1A4 35418573
    3672 7va9:A (3.08) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    3673 7va9:A (3.08) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    3674 7va9:A (3.08) BS04 BCL ? GO:0005886 ... Q3J1A4 35418573
    3675 7va9:B (3.08) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    3676 7va9:B (3.08) BS03 BCL ? GO:0005886 ... Q3J1A3 35418573
    3677 7va9:D (3.08) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    3678 7va9:D (3.08) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    3679 7va9:D (3.08) BS04 BCL ? GO:0005886 ... Q3J1A4 35418573
    3680 7va9:E (3.08) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    3681 7va9:E (3.08) BS04 BCL ? GO:0005886 ... Q3J1A3 35418573
    3682 7va9:F (3.08) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    3683 7va9:F (3.08) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    3684 7va9:F (3.08) BS04 BCL ? GO:0005886 ... Q3J1A4 35418573
    3685 7va9:G (3.08) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    3686 7va9:G (3.08) BS03 BCL ? GO:0005886 ... Q3J1A3 35418573
    3687 7va9:I (3.08) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    3688 7va9:I (3.08) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    3689 7va9:I (3.08) BS04 BCL ? GO:0005886 ... Q3J1A4 35418573
    3690 7va9:J (3.08) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    3691 7va9:J (3.08) BS04 BCL ? GO:0005886 ... Q3J1A3 35418573
    3692 7va9:K (3.08) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    3693 7va9:K (3.08) BS04 BCL ? GO:0005886 ... Q3J1A4 35418573
    3694 7va9:L (3.08) BS01 BCL ? GO:0009772 ... Q3J1A5 35418573
    3695 7va9:L (3.08) BS04 BCL ? GO:0009772 ... Q3J1A5 35418573
    3696 7va9:L (3.08) BS06 BCL ? GO:0009772 ... Q3J1A5 35418573
    3697 7va9:M (3.08) BS02 BCL ? GO:0009772 ... Q3J1A6 35418573
    3698 7va9:M (3.08) BS04 BCL ? GO:0009772 ... Q3J1A6 35418573
    3699 7va9:M (3.08) BS06 BCL ? GO:0009772 ... Q3J1A6 35418573
    3700 7va9:N (3.08) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    3701 7va9:N (3.08) BS03 BCL ? GO:0005886 ... Q3J1A3 35418573
    3702 7va9:O (3.08) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    3703 7va9:O (3.08) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    3704 7va9:P (3.08) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    3705 7va9:P (3.08) BS03 BCL ? GO:0005886 ... Q3J1A3 35418573
    3706 7va9:Q (3.08) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    3707 7va9:Q (3.08) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    3708 7va9:Q (3.08) BS04 BCL ? GO:0005886 ... Q3J1A4 35418573
    3709 7va9:R (3.08) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    3710 7va9:R (3.08) BS03 BCL ? GO:0005886 ... Q3J1A3 35418573
    3711 7va9:S (3.08) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    3712 7va9:S (3.08) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    3713 7va9:T (3.08) BS03 BCL ? GO:0005886 ... Q3J1A3 35418573
    3714 7va9:U (3.08) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    3715 7va9:U (3.08) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    3716 7va9:V (3.08) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    3717 7va9:V (3.08) BS03 BCL ? GO:0005886 ... Q3J1A3 35418573
    3718 7va9:W (3.08) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    3719 7va9:W (3.08) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    3720 7va9:X (3.08) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    3721 7va9:X (3.08) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    3722 7va9:Y (3.08) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    3723 7va9:Y (3.08) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    3724 7va9:Z (3.08) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    3725 7va9:Z (3.08) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    3726 7va9:a (3.08) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    3727 7va9:a (3.08) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    3728 7va9:a (3.08) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    3729 7va9:aa (3.08) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    3730 7va9:aa (3.08) BS03 BCL ? GO:0005886 ... Q3J1A3 35418573
    3731 7va9:ab (3.08) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    3732 7va9:b (3.08) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    3733 7va9:b (3.08) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    3734 7va9:c (3.08) BS02 BCL ? GO:0005886 ... P13402 35418573
    3735 7va9:d (3.08) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    3736 7va9:d (3.08) BS04 BCL ? GO:0005886 ... Q3J1A4 35418573
    3737 7va9:e (3.08) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    3738 7va9:e (3.08) BS03 BCL ? GO:0005886 ... Q3J1A3 35418573
    3739 7va9:f (3.08) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    3740 7va9:f (3.08) BS04 BCL ? GO:0005886 ... Q3J1A4 35418573
    3741 7va9:g (3.08) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    3742 7va9:g (3.08) BS03 BCL ? GO:0005886 ... Q3J1A3 35418573
    3743 7va9:i (3.08) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    3744 7va9:i (3.08) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    3745 7va9:j (3.08) BS03 BCL ? GO:0005886 ... Q3J1A3 35418573
    3746 7va9:k (3.08) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    3747 7va9:k (3.08) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    3748 7va9:l (3.08) BS01 BCL ? GO:0009772 ... Q3J1A5 35418573
    3749 7va9:l (3.08) BS04 BCL ? GO:0009772 ... Q3J1A5 35418573
    3750 7va9:l (3.08) BS06 BCL ? GO:0009772 ... Q3J1A5 35418573
    3751 7va9:m (3.08) BS02 BCL ? GO:0009772 ... Q3J1A6 35418573
    3752 7va9:m (3.08) BS04 BCL ? GO:0009772 ... Q3J1A6 35418573
    3753 7va9:m (3.08) BS06 BCL ? GO:0009772 ... Q3J1A6 35418573
    3754 7va9:n (3.08) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    3755 7va9:n (3.08) BS04 BCL ? GO:0005886 ... Q3J1A3 35418573
    3756 7va9:o (3.08) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    3757 7va9:o (3.08) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    3758 7va9:o (3.08) BS04 BCL ? GO:0005886 ... Q3J1A4 35418573
    3759 7va9:p (3.08) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    3760 7va9:p (3.08) BS04 BCL ? GO:0005886 ... Q3J1A3 35418573
    3761 7va9:p (3.08) BS05 BCL ? GO:0005886 ... Q3J1A3 35418573
    3762 7va9:q (3.08) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    3763 7va9:q (3.08) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    3764 7va9:q (3.08) BS04 BCL ? GO:0005886 ... Q3J1A4 35418573
    3765 7va9:r (3.08) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    3766 7va9:r (3.08) BS03 BCL ? GO:0005886 ... Q3J1A3 35418573
    3767 7va9:s (3.08) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    3768 7va9:s (3.08) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    3769 7va9:t (3.08) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    3770 7va9:t (3.08) BS03 BCL ? GO:0005886 ... Q3J1A3 35418573
    3771 7va9:u (3.08) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    3772 7va9:u (3.08) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    3773 7va9:v (3.08) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    3774 7va9:v (3.08) BS03 BCL ? GO:0005886 ... Q3J1A3 35418573
    3775 7va9:w (3.08) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    3776 7va9:w (3.08) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    3777 7va9:x (3.08) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    3778 7va9:x (3.08) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    3779 7va9:y (3.08) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    3780 7va9:y (3.08) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    3781 7va9:z (3.08) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    3782 7va9:z (3.08) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    3783 7vb9:0 (3.45) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    3784 7vb9:0 (3.45) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    3785 7vb9:4 (3.45) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    3786 7vb9:4 (3.45) BS02 BCL ? GO:0005886 ... Q3J1A3 35418573
    3787 7vb9:5 (3.45) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    3788 7vb9:5 (3.45) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    3789 7vb9:6 (3.45) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    3790 7vb9:6 (3.45) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    3791 7vb9:6 (3.45) BS04 BCL ? GO:0005886 ... Q3J1A4 35418573
    3792 7vb9:7 (3.45) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    3793 7vb9:7 (3.45) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    3794 7vb9:8 (3.45) BS01 BCL ? GO:0005886 ... Q3J1A3 35418573
    3795 7vb9:9 (3.45) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    3796 7vb9:9 (3.45) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573
    3797 7vb9:9 (3.45) BS05 BCL ? GO:0005886 ... Q3J1A4 35418573
    3798 7vb9:A (3.45) BS01 BCL ? GO:0005886 ... Q3J1A4 35418573
    3799 7vb9:A (3.45) BS02 BCL ? GO:0005886 ... Q3J1A4 35418573
    3800 7vb9:A (3.45) BS03 BCL ? GO:0005886 ... Q3J1A4 35418573

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417