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BioLiP
Download all results in tab-seperated text for 13 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 4fsd:A (1.75) BS01 ARS ? GO:0008168 ... C0JV69 22712827
    2 6cx6:A (2.84) BS02 ARS 2.1.1.137 GO:0008168 ... C0JV69 29894638
    3 6cx6:B (2.84) BS02 ARS 2.1.1.137 GO:0008168 ... C0JV69 29894638
    4 7dhy:A (2.15) BS01 ARS ? GO:0000976 ... P04637 33357454
    5 7dhy:B (2.15) BS01 ARS ? GO:0000976 ... P04637 33357454
    6 7dhy:C (2.15) BS01 ARS ? GO:0000976 ... P04637 33357454
    7 7dhy:D (2.15) BS01 ARS ? GO:0000976 ... P04637 33357454
    8 7dhz:A (1.74) BS01 ARS ? GO:0000976 ... P04637 33357454
    9 7dhz:B (1.74) BS01 ARS ? GO:0000976 ... P04637 33357454
    10 7v97:A (2.02) BS01 ARS ? GO:0000976 ... P04637 37018419
    11 7v97:B (2.02) BS01 ARS ? GO:0000976 ... P04637 37018419
    12 7v97:C (2.02) BS01 ARS ? GO:0000976 ... P04637 37018419
    13 7v97:D (2.02) BS01 ARS ? GO:0000976 ... P04637 37018419
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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