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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 662 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    401 8sg8:B (3.0) BS02 AF3 ? GO:0002199 ... P78371 37852256
    402 8sg8:D (3.0) BS02 AF3 ? GO:0002199 ... P50991 37852256
    403 8sg8:E (3.0) BS03 AF3 ? GO:0003730 ... P48643 37852256
    404 8sg8:G (3.0) BS02 AF3 ? GO:0002199 ... P49368 37852256
    405 8sg8:H (3.0) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    406 8sg8:Q (3.0) BS02 AF3 ? GO:0002199 ... P50990 37852256
    407 8sg8:Z (3.0) BS02 AF3 ? GO:0003723 ... P40227 37852256
    408 8sg8:a (3.0) BS02 AF3 ? GO:0000242 ... P17987 37852256
    409 8sg8:b (3.0) BS02 AF3 ? GO:0002199 ... P78371 37852256
    410 8sg8:d (3.0) BS02 AF3 ? GO:0002199 ... P50991 37852256
    411 8sg8:e (3.0) BS02 AF3 ? GO:0003730 ... P48643 37852256
    412 8sg8:g (3.0) BS02 AF3 ? GO:0002199 ... P49368 37852256
    413 8sg8:h (3.0) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    414 8sg8:q (3.0) BS02 AF3 ? GO:0002199 ... P50990 37852256
    415 8sg8:z (3.0) BS02 AF3 ? GO:0003723 ... P40227 37852256
    416 8sg9:A (2.9) BS02 AF3 ? GO:0000242 ... P17987 37852256
    417 8sg9:B (2.9) BS02 AF3 ? GO:0002199 ... P78371 37852256
    418 8sg9:D (2.9) BS02 AF3 ? GO:0002199 ... P50991 37852256
    419 8sg9:E (2.9) BS02 AF3 ? GO:0003730 ... P48643 37852256
    420 8sg9:G (2.9) BS02 AF3 ? GO:0002199 ... P49368 37852256
    421 8sg9:H (2.9) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    422 8sg9:Q (2.9) BS02 AF3 ? GO:0002199 ... P50990 37852256
    423 8sg9:Z (2.9) BS03 AF3 ? GO:0003723 ... P40227 37852256
    424 8sg9:a (2.9) BS02 AF3 ? GO:0000242 ... P17987 37852256
    425 8sg9:b (2.9) BS02 AF3 ? GO:0002199 ... P78371 37852256
    426 8sg9:d (2.9) BS02 AF3 ? GO:0002199 ... P50991 37852256
    427 8sg9:e (2.9) BS02 AF3 ? GO:0003730 ... P48643 37852256
    428 8sg9:g (2.9) BS02 AF3 ? GO:0002199 ... P49368 37852256
    429 8sg9:h (2.9) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    430 8sg9:q (2.9) BS02 AF3 ? GO:0002199 ... P50990 37852256
    431 8sg9:z (2.9) BS02 AF3 ? GO:0003723 ... P40227 37852256
    432 8sgc:A (2.9) BS02 AF3 ? GO:0000242 ... P17987 37852256
    433 8sgc:B (2.9) BS02 AF3 ? GO:0002199 ... P78371 37852256
    434 8sgc:D (2.9) BS02 AF3 ? GO:0002199 ... P50991 37852256
    435 8sgc:E (2.9) BS02 AF3 ? GO:0003730 ... P48643 37852256
    436 8sgc:G (2.9) BS02 AF3 ? GO:0002199 ... P49368 37852256
    437 8sgc:H (2.9) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    438 8sgc:Q (2.9) BS03 AF3 ? GO:0002199 ... P50990 37852256
    439 8sgc:Z (2.9) BS03 AF3 ? GO:0003723 ... P40227 37852256
    440 8sgc:a (2.9) BS02 AF3 ? GO:0000242 ... P17987 37852256
    441 8sgc:b (2.9) BS02 AF3 ? GO:0002199 ... P78371 37852256
    442 8sgc:d (2.9) BS02 AF3 ? GO:0002199 ... P50991 37852256
    443 8sgc:e (2.9) BS02 AF3 ? GO:0003730 ... P48643 37852256
    444 8sgc:g (2.9) BS02 AF3 ? GO:0002199 ... P49368 37852256
    445 8sgc:h (2.9) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    446 8sgc:q (2.9) BS02 AF3 ? GO:0002199 ... P50990 37852256
    447 8sgc:z (2.9) BS02 AF3 ? GO:0003723 ... P40227 37852256
    448 8sgl:A (2.9) BS02 AF3 ? GO:0000242 ... P17987 37852256
    449 8sgl:B (2.9) BS02 AF3 ? GO:0002199 ... P78371 37852256
    450 8sgl:D (2.9) BS02 AF3 ? GO:0002199 ... P50991 37852256
    451 8sgl:E (2.9) BS02 AF3 ? GO:0003730 ... P48643 37852256
    452 8sgl:G (2.9) BS02 AF3 ? GO:0002199 ... P49368 37852256
    453 8sgl:H (2.9) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    454 8sgl:Q (2.9) BS03 AF3 ? GO:0002199 ... P50990 37852256
    455 8sgl:Z (2.9) BS02 AF3 ? GO:0003723 ... P40227 37852256
    456 8sgl:a (2.9) BS02 AF3 ? GO:0000242 ... P17987 37852256
    457 8sgl:b (2.9) BS02 AF3 ? GO:0002199 ... P78371 37852256
    458 8sgl:d (2.9) BS02 AF3 ? GO:0002199 ... P50991 37852256
    459 8sgl:e (2.9) BS02 AF3 ? GO:0003730 ... P48643 37852256
    460 8sgl:g (2.9) BS02 AF3 ? GO:0002199 ... P49368 37852256
    461 8sgl:h (2.9) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    462 8sgl:q (2.9) BS02 AF3 ? GO:0002199 ... P50990 37852256
    463 8sgl:z (2.9) BS02 AF3 ? GO:0003723 ... P40227 37852256
    464 8sh9:A (2.7) BS02 AF3 ? GO:0000242 ... P17987 37852256
    465 8sh9:B (2.7) BS02 AF3 ? GO:0002199 ... P78371 37852256
    466 8sh9:D (2.7) BS02 AF3 ? GO:0002199 ... P50991 37852256
    467 8sh9:E (2.7) BS02 AF3 ? GO:0003730 ... P48643 37852256
    468 8sh9:G (2.7) BS02 AF3 ? GO:0002199 ... P49368 37852256
    469 8sh9:H (2.7) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    470 8sh9:Q (2.7) BS02 AF3 ? GO:0002199 ... P50990 37852256
    471 8sh9:Z (2.7) BS02 AF3 ? GO:0003723 ... P40227 37852256
    472 8sh9:a (2.7) BS02 AF3 ? GO:0000242 ... P17987 37852256
    473 8sh9:b (2.7) BS02 AF3 ? GO:0002199 ... P78371 37852256
    474 8sh9:d (2.7) BS02 AF3 ? GO:0002199 ... P50991 37852256
    475 8sh9:e (2.7) BS02 AF3 ? GO:0003730 ... P48643 37852256
    476 8sh9:g (2.7) BS02 AF3 ? GO:0002199 ... P49368 37852256
    477 8sh9:h (2.7) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    478 8sh9:q (2.7) BS03 AF3 ? GO:0002199 ... P50990 37852256
    479 8sh9:z (2.7) BS02 AF3 ? GO:0003723 ... P40227 37852256
    480 8sha:A (3.0) BS02 AF3 ? GO:0000242 ... P17987 37852256
    481 8sha:B (3.0) BS02 AF3 ? GO:0002199 ... P78371 37852256
    482 8sha:D (3.0) BS02 AF3 ? GO:0002199 ... P50991 37852256
    483 8sha:E (3.0) BS02 AF3 ? GO:0003730 ... P48643 37852256
    484 8sha:G (3.0) BS02 AF3 ? GO:0002199 ... P49368 37852256
    485 8sha:H (3.0) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    486 8sha:Q (3.0) BS02 AF3 ? GO:0002199 ... P50990 37852256
    487 8sha:Z (3.0) BS02 AF3 ? GO:0003723 ... P40227 37852256
    488 8sha:a (3.0) BS02 AF3 ? GO:0000242 ... P17987 37852256
    489 8sha:b (3.0) BS02 AF3 ? GO:0002199 ... P78371 37852256
    490 8sha:d (3.0) BS02 AF3 ? GO:0002199 ... P50991 37852256
    491 8sha:e (3.0) BS02 AF3 ? GO:0003730 ... P48643 37852256
    492 8sha:g (3.0) BS02 AF3 ? GO:0002199 ... P49368 37852256
    493 8sha:h (3.0) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    494 8sha:q (3.0) BS02 AF3 ? GO:0002199 ... P50990 37852256
    495 8sha:z (3.0) BS02 AF3 ? GO:0003723 ... P40227 37852256
    496 8shd:A (2.9) BS02 AF3 ? GO:0000242 ... P17987 37852256
    497 8shd:B (2.9) BS02 AF3 ? GO:0002199 ... P78371 37852256
    498 8shd:D (2.9) BS02 AF3 ? GO:0002199 ... P50991 37852256
    499 8shd:E (2.9) BS02 AF3 ? GO:0003730 ... P48643 37852256
    500 8shd:G (2.9) BS02 AF3 ? GO:0002199 ... P49368 37852256
    501 8shd:H (2.9) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    502 8shd:Q (2.9) BS02 AF3 ? GO:0002199 ... P50990 37852256
    503 8shd:Z (2.9) BS03 AF3 ? GO:0003723 ... P40227 37852256
    504 8shd:a (2.9) BS02 AF3 ? GO:0000242 ... P17987 37852256
    505 8shd:b (2.9) BS02 AF3 ? GO:0002199 ... P78371 37852256
    506 8shd:d (2.9) BS02 AF3 ? GO:0002199 ... P50991 37852256
    507 8shd:e (2.9) BS02 AF3 ? GO:0003730 ... P48643 37852256
    508 8shd:g (2.9) BS02 AF3 ? GO:0002199 ... P49368 37852256
    509 8shd:h (2.9) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    510 8shd:q (2.9) BS02 AF3 ? GO:0002199 ... P50990 37852256
    511 8shd:z (2.9) BS02 AF3 ? GO:0003723 ... P40227 37852256
    512 8she:A (2.8) BS02 AF3 ? GO:0000242 ... P17987 37852256
    513 8she:B (2.8) BS02 AF3 ? GO:0002199 ... P78371 37852256
    514 8she:D (2.8) BS02 AF3 ? GO:0002199 ... P50991 37852256
    515 8she:E (2.8) BS02 AF3 ? GO:0003730 ... P48643 37852256
    516 8she:G (2.8) BS02 AF3 ? GO:0002199 ... P49368 37852256
    517 8she:H (2.8) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    518 8she:Q (2.8) BS02 AF3 ? GO:0002199 ... P50990 37852256
    519 8she:Z (2.8) BS03 AF3 ? GO:0003723 ... P40227 37852256
    520 8she:a (2.8) BS02 AF3 ? GO:0000242 ... P17987 37852256
    521 8she:b (2.8) BS02 AF3 ? GO:0002199 ... P78371 37852256
    522 8she:d (2.8) BS02 AF3 ? GO:0002199 ... P50991 37852256
    523 8she:e (2.8) BS02 AF3 ? GO:0003730 ... P48643 37852256
    524 8she:g (2.8) BS02 AF3 ? GO:0002199 ... P49368 37852256
    525 8she:h (2.8) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    526 8she:q (2.8) BS02 AF3 ? GO:0002199 ... P50990 37852256
    527 8she:z (2.8) BS02 AF3 ? GO:0003723 ... P40227 37852256
    528 8shf:A (3.0) BS02 AF3 ? GO:0000242 ... P17987 37852256
    529 8shf:B (3.0) BS02 AF3 ? GO:0002199 ... P78371 37852256
    530 8shf:D (3.0) BS02 AF3 ? GO:0002199 ... P50991 37852256
    531 8shf:E (3.0) BS02 AF3 ? GO:0003730 ... P48643 37852256
    532 8shf:G (3.0) BS02 AF3 ? GO:0002199 ... P49368 37852256
    533 8shf:H (3.0) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    534 8shf:Q (3.0) BS02 AF3 ? GO:0002199 ... P50990 37852256
    535 8shf:Z (3.0) BS02 AF3 ? GO:0003723 ... P40227 37852256
    536 8shf:a (3.0) BS02 AF3 ? GO:0000242 ... P17987 37852256
    537 8shf:b (3.0) BS02 AF3 ? GO:0002199 ... P78371 37852256
    538 8shf:d (3.0) BS02 AF3 ? GO:0002199 ... P50991 37852256
    539 8shf:e (3.0) BS02 AF3 ? GO:0003730 ... P48643 37852256
    540 8shf:g (3.0) BS02 AF3 ? GO:0002199 ... P49368 37852256
    541 8shf:h (3.0) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    542 8shf:q (3.0) BS03 AF3 ? GO:0002199 ... P50990 37852256
    543 8shf:z (3.0) BS02 AF3 ? GO:0003723 ... P40227 37852256
    544 8shg:A (2.8) BS02 AF3 ? GO:0000242 ... P17987 37852256
    545 8shg:B (2.8) BS02 AF3 ? GO:0002199 ... P78371 37852256
    546 8shg:D (2.8) BS02 AF3 ? GO:0002199 ... P50991 37852256
    547 8shg:E (2.8) BS02 AF3 ? GO:0003730 ... P48643 37852256
    548 8shg:G (2.8) BS02 AF3 ? GO:0002199 ... P49368 37852256
    549 8shg:H (2.8) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    550 8shg:Q (2.8) BS02 AF3 ? GO:0002199 ... P50990 37852256
    551 8shg:Z (2.8) BS03 AF3 ? GO:0003723 ... P40227 37852256
    552 8shg:a (2.8) BS02 AF3 ? GO:0000242 ... P17987 37852256
    553 8shg:b (2.8) BS02 AF3 ? GO:0002199 ... P78371 37852256
    554 8shg:d (2.8) BS02 AF3 ? GO:0002199 ... P50991 37852256
    555 8shg:e (2.8) BS02 AF3 ? GO:0003730 ... P48643 37852256
    556 8shg:g (2.8) BS02 AF3 ? GO:0002199 ... P49368 37852256
    557 8shg:h (2.8) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    558 8shg:q (2.8) BS02 AF3 ? GO:0002199 ... P50990 37852256
    559 8shg:z (2.8) BS02 AF3 ? GO:0003723 ... P40227 37852256
    560 8shl:A (3.0) BS02 AF3 ? GO:0000242 ... P17987 37852256
    561 8shl:B (3.0) BS02 AF3 ? GO:0002199 ... P78371 37852256
    562 8shl:D (3.0) BS02 AF3 ? GO:0002199 ... P50991 37852256
    563 8shl:E (3.0) BS02 AF3 ? GO:0003730 ... P48643 37852256
    564 8shl:G (3.0) BS02 AF3 ? GO:0002199 ... P49368 37852256
    565 8shl:H (3.0) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    566 8shl:Q (3.0) BS02 AF3 ? GO:0002199 ... P50990 37852256
    567 8shl:Z (3.0) BS03 AF3 ? GO:0003723 ... P40227 37852256
    568 8shl:a (3.0) BS02 AF3 ? GO:0000242 ... P17987 37852256
    569 8shl:b (3.0) BS02 AF3 ? GO:0002199 ... P78371 37852256
    570 8shl:d (3.0) BS02 AF3 ? GO:0002199 ... P50991 37852256
    571 8shl:e (3.0) BS02 AF3 ? GO:0003730 ... P48643 37852256
    572 8shl:g (3.0) BS02 AF3 ? GO:0002199 ... P49368 37852256
    573 8shl:h (3.0) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    574 8shl:q (3.0) BS02 AF3 ? GO:0002199 ... P50990 37852256
    575 8shl:z (3.0) BS02 AF3 ? GO:0003723 ... P40227 37852256
    576 8shn:A (2.8) BS02 AF3 ? GO:0000242 ... P17987 37852256
    577 8shn:B (2.8) BS02 AF3 ? GO:0002199 ... P78371 37852256
    578 8shn:D (2.8) BS02 AF3 ? GO:0002199 ... P50991 37852256
    579 8shn:E (2.8) BS02 AF3 ? GO:0003730 ... P48643 37852256
    580 8shn:G (2.8) BS02 AF3 ? GO:0002199 ... P49368 37852256
    581 8shn:H (2.8) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    582 8shn:Q (2.8) BS02 AF3 ? GO:0002199 ... P50990 37852256
    583 8shn:Z (2.8) BS03 AF3 ? GO:0003723 ... P40227 37852256
    584 8shn:a (2.8) BS02 AF3 ? GO:0000242 ... P17987 37852256
    585 8shn:b (2.8) BS02 AF3 ? GO:0002199 ... P78371 37852256
    586 8shn:d (2.8) BS02 AF3 ? GO:0002199 ... P50991 37852256
    587 8shn:e (2.8) BS02 AF3 ? GO:0003730 ... P48643 37852256
    588 8shn:g (2.8) BS02 AF3 ? GO:0002199 ... P49368 37852256
    589 8shn:h (2.8) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    590 8shn:q (2.8) BS02 AF3 ? GO:0002199 ... P50990 37852256
    591 8shn:z (2.8) BS02 AF3 ? GO:0003723 ... P40227 37852256
    592 8sho:A (3.0) BS02 AF3 ? GO:0000242 ... P17987 37852256
    593 8sho:B (3.0) BS02 AF3 ? GO:0002199 ... P78371 37852256
    594 8sho:D (3.0) BS02 AF3 ? GO:0002199 ... P50991 37852256
    595 8sho:E (3.0) BS02 AF3 ? GO:0003730 ... P48643 37852256
    596 8sho:G (3.0) BS02 AF3 ? GO:0002199 ... P49368 37852256
    597 8sho:H (3.0) BS02 AF3 ? GO:0005515 ... Q99832 37852256
    598 8sho:Q (3.0) BS02 AF3 ? GO:0002199 ... P50990 37852256
    599 8sho:Z (3.0) BS02 AF3 ? GO:0003723 ... P40227 37852256
    600 8sho:a (3.0) BS02 AF3 ? GO:0000242 ... P17987 37852256
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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