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BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

BioLiP
Download all results in tab-seperated text for 12079 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.
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    # PDB
    (Resolution Å)
    Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    10801 8pjj:A (4.24) BS02 ADP 3.6.4.13 GO:0000228 ... P24785 37989319
    10802 8pmj:A (2.81) BS04 ADP 7.6.2.- GO:0000139 ... O95342 37949847
    10803 8po7:A (2.26) BS02 ADP 3.6.4.13 GO:0003676 ... P43329 38412313
    10804 8po7:B (2.26) BS01 ADP 3.6.4.13 GO:0003676 ... P43329 38412313
    10805 8po8:A (2.52) BS03 ADP 3.6.4.13 GO:0003676 ... P43329 38412313
    10806 8po8:B (2.52) BS03 ADP 3.6.4.13 GO:0003676 ... P43329 38412313
    10807 8pp9:A (1.73) BS02 ADP 2.7.1.127 GO:0016301 ... P23677 38374076
    10808 8pp9:B (1.73) BS01 ADP 2.7.1.127 GO:0016301 ... P23677 38374076
    10809 8ppe:A (1.59) BS01 ADP 2.7.1.127 GO:0016301 ... P23677 38374076
    10810 8ppe:B (1.59) BS01 ADP 2.7.1.127 GO:0016301 ... P23677 38374076
    10811 8ppg:A (1.75) BS01 ADP 2.7.1.127 GO:0016301 ... P23677 38374076
    10812 8ppg:B (1.75) BS01 ADP 2.7.1.127 GO:0016301 ... P23677 38374076
    10813 8ppj:A (1.75) BS01 ADP 2.7.1.127 GO:0016301 ... P23677 38374076
    10814 8ppj:B (1.75) BS01 ADP 2.7.1.127 GO:0016301 ... P23677 38374076
    10815 8pqw:A (4.2) BS01 ADP ? GO:0003723 ... Q14204 38547289
    10816 8pqw:A (4.2) BS05 ADP ? GO:0003723 ... Q14204 38547289
    10817 8pqw:A (4.2) BS06 ADP ? GO:0003723 ... Q14204 38547289
    10818 8pqx:A (3.3) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    10819 8pqx:B (3.3) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    10820 8pqx:B (3.3) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    10821 8pqx:C (3.3) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    10822 8pqx:C (3.3) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    10823 8pqx:D (3.3) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    10824 8pqx:D (3.3) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    10825 8pqx:E (3.3) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    10826 8pqx:E (3.3) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    10827 8pqx:F (3.3) BS01 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    10828 8pqx:F (3.3) BS02 ADP 3.6.4.6 GO:0000502 ... P55072 N/A
    10829 8pqy:A (3.8) BS01 ADP ? GO:0003723 ... Q14204 38547289
    10830 8pqy:A (3.8) BS05 ADP ? GO:0003723 ... Q14204 38547289
    10831 8pqy:A (3.8) BS06 ADP ? GO:0003723 ... Q14204 38547289
    10832 8pqz:A (5.5) BS01 ADP ? GO:0003723 ... Q14204 38547289
    10833 8pqz:A (5.5) BS03 ADP ? GO:0003723 ... Q14204 38547289
    10834 8pqz:A (5.5) BS04 ADP ? GO:0003723 ... Q14204 38547289
    10835 8pqz:J (5.5) BS01 ADP ? GO:0003723 ... Q14204 38547289
    10836 8pqz:J (5.5) BS03 ADP ? GO:0003723 ... Q14204 38547289
    10837 8pqz:J (5.5) BS04 ADP ? GO:0003723 ... Q14204 38547289
    10838 8pr7:A (2.76) BS01 ADP N/A N/A O14965 N/A
    10839 8pr7:D (2.76) BS02 ADP N/A N/A O14965 N/A
    10840 8ptg:A (2.9) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 38622114
    10841 8ptg:A (2.9) BS04 ADP 3.6.4.- GO:0003676 ... P0AG30 38622114
    10842 8ptg:B (2.9) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 38622114
    10843 8ptg:B (2.9) BS03 ADP 3.6.4.- GO:0003676 ... P0AG30 38622114
    10844 8ptg:C (2.9) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 38622114
    10845 8ptg:C (2.9) BS03 ADP 3.6.4.- GO:0003676 ... P0AG30 38622114
    10846 8ptg:D (2.9) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 38622114
    10847 8ptg:D (2.9) BS03 ADP 3.6.4.- GO:0003676 ... P0AG30 38622114
    10848 8ptg:E (2.9) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 38622114
    10849 8ptg:F (2.9) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 38622114
    10850 8ptk:A (10.0) BS01 ADP ? N/A F2Z5G5 38547289
    10851 8ptk:B (10.0) BS01 ADP ? N/A F2Z5G5 38547289
    10852 8ptk:C (10.0) BS01 ADP ? N/A F2Z5G5 38547289
    10853 8ptk:D (10.0) BS01 ADP ? N/A F2Z5G5 38547289
    10854 8ptk:E (10.0) BS01 ADP ? N/A F2Z5G5 38547289
    10855 8ptk:F (10.0) BS01 ADP ? N/A F2Z5G5 38547289
    10856 8ptk:G (10.0) BS01 ADP ? N/A F2Z5G5 38547289
    10857 8ptk:I (10.0) BS01 ADP ? N/A F2Z5G5 38547289
    10858 8ptk:e (10.0) BS01 ADP ? GO:0003723 ... Q14204 38547289
    10859 8ptk:e (10.0) BS03 ADP ? GO:0003723 ... Q14204 38547289
    10860 8ptk:e (10.0) BS04 ADP ? GO:0003723 ... Q14204 38547289
    10861 8ptk:f (10.0) BS01 ADP ? GO:0003723 ... Q14204 38547289
    10862 8ptk:f (10.0) BS03 ADP ? GO:0003723 ... Q14204 38547289
    10863 8ptk:f (10.0) BS04 ADP ? GO:0003723 ... Q14204 38547289
    10864 8ptk:m (10.0) BS01 ADP ? GO:0003723 ... Q14204 38547289
    10865 8ptk:n (10.0) BS01 ADP ? GO:0003723 ... Q14204 38547289
    10866 8ptm:C (2.9) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 38622114
    10867 8ptm:D (2.9) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 38622114
    10868 8ptm:E (2.9) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 38622114
    10869 8pto:B (2.7) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 38622114
    10870 8pto:C (2.7) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 38622114
    10871 8pto:D (2.7) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 38622114
    10872 8pvx:A (3.55) BS02 ADP N/A GO:0000287 ... P68135 N/A
    10873 8pvx:B (3.55) BS02 ADP N/A GO:0000287 ... P68135 N/A
    10874 8pvx:C (3.55) BS02 ADP N/A GO:0000287 ... P68135 N/A
    10875 8pvx:D (3.55) BS02 ADP N/A GO:0000287 ... P68135 N/A
    10876 8pvx:E (3.55) BS02 ADP N/A GO:0000287 ... P68135 N/A
    10877 8q3n:A (2.63) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10878 8q3n:B (2.63) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10879 8q3n:B (2.63) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10880 8q3n:C (2.63) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10881 8q3n:C (2.63) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10882 8q3n:D (2.63) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10883 8q3n:E (2.63) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10884 8q3n:E (2.63) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10885 8q3n:F (2.63) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10886 8q3p:a (3.5) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10887 8q3p:a (3.5) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10888 8q3p:b (3.5) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10889 8q3p:b (3.5) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10890 8q3p:c (3.5) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10891 8q3p:c (3.5) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10892 8q3p:d (3.5) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10893 8q3p:d (3.5) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10894 8q3p:e (3.5) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10895 8q3p:e (3.5) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10896 8q3p:f (3.5) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10897 8q3p:f (3.5) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10898 8q3p:g (3.5) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10899 8q3p:g (3.5) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10900 8q3p:h (3.5) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10901 8q3p:h (3.5) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10902 8q3p:i (3.5) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10903 8q3p:i (3.5) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10904 8q3p:j (3.5) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10905 8q3p:j (3.5) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10906 8q3p:k (3.5) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10907 8q3p:k (3.5) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10908 8q3p:l (3.5) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10909 8q3p:l (3.5) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10910 8q3p:m (3.5) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10911 8q3p:m (3.5) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10912 8q3p:n (3.5) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10913 8q3p:n (3.5) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10914 8q3p:o (3.5) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10915 8q3p:o (3.5) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10916 8q3p:p (3.5) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10917 8q3p:p (3.5) BS02 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10918 8q3p:q (3.5) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10919 8q3p:r (3.5) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10920 8q3q:a (3.3) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10921 8q3q:b (3.3) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10922 8q3q:c (3.3) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10923 8q3q:d (3.3) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10924 8q3q:e (3.3) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10925 8q3q:f (3.3) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10926 8q3q:g (3.3) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10927 8q3q:h (3.3) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10928 8q3q:i (3.3) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10929 8q3q:j (3.3) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10930 8q3q:k (3.3) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10931 8q3q:l (3.3) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10932 8q3q:m (3.3) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10933 8q3q:n (3.3) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10934 8q3q:o (3.3) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10935 8q3q:p (3.3) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10936 8q3q:q (3.3) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10937 8q3q:r (3.3) BS01 ADP 3.6.4.- GO:0003676 ... P0AG30 37645988
    10938 8q4d:E (3.62) BS01 ADP N/A GO:0005524 ... Q45619 38926614
    10939 8q4d:O (3.62) BS01 ADP N/A GO:0005524 ... Q45619 38926614
    10940 8q5v:A (2.74) BS01 ADP 1.18.6.1 GO:0005524 ... P25767 38696373
    10941 8q5v:B (2.74) BS02 ADP 1.18.6.1 GO:0005524 ... P25767 38696373
    10942 8q5v:C (2.74) BS01 ADP 1.18.6.1 GO:0005524 ... P25767 38696373
    10943 8q5v:D (2.74) BS02 ADP 1.18.6.1 GO:0005524 ... P25767 38696373
    10944 8q5v:E (2.74) BS01 ADP 1.18.6.1 GO:0005524 ... P25767 38696373
    10945 8q5v:F (2.74) BS02 ADP 1.18.6.1 GO:0005524 ... P25767 38696373
    10946 8q5v:G (2.74) BS01 ADP 1.18.6.1 GO:0005524 ... P25767 38696373
    10947 8q5v:H (2.74) BS02 ADP 1.18.6.1 GO:0005524 ... P25767 38696373
    10948 8q5v:J (2.74) BS01 ADP 1.18.6.1 GO:0005524 ... P25767 38696373
    10949 8q5v:K (2.74) BS02 ADP 1.18.6.1 GO:0005524 ... P25767 38696373
    10950 8q5v:L (2.74) BS01 ADP 1.18.6.1 GO:0005524 ... P25767 38696373
    10951 8q5v:M (2.74) BS02 ADP 1.18.6.1 GO:0005524 ... P25767 38696373
    10952 8q5w:A (2.49) BS01 ADP 1.18.6.1 GO:0005524 ... D5VUA1 38696373
    10953 8q5w:B (2.49) BS02 ADP 1.18.6.1 GO:0005524 ... D5VUA1 38696373
    10954 8q5w:C (2.49) BS02 ADP 1.18.6.1 GO:0005524 ... D5VUA1 38696373
    10955 8q5w:D (2.49) BS02 ADP 1.18.6.1 GO:0005524 ... D5VUA1 38696373
    10956 8q5w:E (2.49) BS02 ADP 1.18.6.1 GO:0005524 ... D5VUA1 38696373
    10957 8q5w:F (2.49) BS02 ADP 1.18.6.1 GO:0005524 ... D5VUA1 38696373
    10958 8q5w:G (2.49) BS01 ADP 1.18.6.1 GO:0005524 ... D5VUA1 38696373
    10959 8q5w:H (2.49) BS02 ADP 1.18.6.1 GO:0005524 ... D5VUA1 38696373
    10960 8q5w:I (2.49) BS02 ADP 1.18.6.1 GO:0005524 ... D5VUA1 38696373
    10961 8q5w:J (2.49) BS02 ADP 1.18.6.1 GO:0005524 ... D5VUA1 38696373
    10962 8q5w:K (2.49) BS02 ADP 1.18.6.1 GO:0005524 ... D5VUA1 38696373
    10963 8q5w:L (2.49) BS02 ADP 1.18.6.1 GO:0005524 ... D5VUA1 38696373
    10964 8q5x:A (1.7) BS01 ADP 1.18.6.1 GO:0005524 ... P0CW57 38696373
    10965 8q5x:A (1.7) BS03 ADP 1.18.6.1 GO:0005524 ... P0CW57 38696373
    10966 8q5x:B (1.7) BS02 ADP 1.18.6.1 GO:0005524 ... P0CW57 38696373
    10967 8q5x:B (1.7) BS04 ADP 1.18.6.1 GO:0005524 ... P0CW57 38696373
    10968 8q5x:C (1.7) BS01 ADP 1.18.6.1 GO:0005524 ... P0CW57 38696373
    10969 8q5x:C (1.7) BS03 ADP 1.18.6.1 GO:0005524 ... P0CW57 38696373
    10970 8q5x:D (1.7) BS01 ADP 1.18.6.1 GO:0005524 ... P0CW57 38696373
    10971 8q5x:D (1.7) BS03 ADP 1.18.6.1 GO:0005524 ... P0CW57 38696373
    10972 8q72:A (4.17) BS01 ADP ? N/A A0A6D0I2P0 38309275
    10973 8q72:A (4.17) BS02 ADP ? N/A A0A6D0I2P0 38309275
    10974 8q72:B (4.17) BS01 ADP ? N/A A0A6D0I2P0 38309275
    10975 8q72:B (4.17) BS02 ADP ? N/A A0A6D0I2P0 38309275
    10976 8q72:F (4.17) BS01 ADP ? N/A A0A6D0I2P0 38309275
    10977 8q72:F (4.17) BS02 ADP ? N/A A0A6D0I2P0 38309275
    10978 8q72:G (4.17) BS01 ADP ? N/A A0A6D0I2P0 38309275
    10979 8q72:G (4.17) BS02 ADP ? N/A A0A6D0I2P0 38309275
    10980 8qc7:A (2.03) BS02 ADP N/A N/A B7LXC3 N/A
    10981 8qc7:B (2.03) BS02 ADP N/A N/A B7LXC3 N/A
    10982 8qcc:A (1.9) BS01 ADP N/A N/A B7LXC3 N/A
    10983 8qcc:B (1.9) BS01 ADP N/A N/A B7LXC3 N/A
    10984 8qcn:A (1.86) BS01 ADP N/A N/A B7LXC3 N/A
    10985 8qcn:B (1.86) BS01 ADP N/A N/A B7LXC3 N/A
    10986 8qco:A (1.55) BS01 ADP N/A N/A B7LXC3 N/A
    10987 8qco:B (1.55) BS01 ADP N/A N/A B7LXC3 N/A
    10988 8qmo:A (2.76) BS02 ADP ? GO:0001890 ... P08238 38135181
    10989 8qmo:B (2.76) BS02 ADP ? GO:0001890 ... P08238 38135181
    10990 8qw1:A (2.1) BS01 ADP N/A N/A Q13232 N/A
    10991 8qw1:B (2.1) BS01 ADP N/A N/A Q13232 N/A
    10992 8qw1:C (2.1) BS01 ADP N/A N/A Q13232 N/A
    10993 8qw1:D (2.1) BS01 ADP N/A N/A Q13232 N/A
    10994 8qw1:E (2.1) BS01 ADP N/A N/A Q13232 N/A
    10995 8qw1:F (2.1) BS01 ADP N/A N/A Q13232 N/A
    10996 8qw3:A (1.255) BS01 ADP N/A N/A Q13232 N/A
    10997 8qw3:B (1.255) BS01 ADP N/A N/A Q13232 N/A
    10998 8qw3:C (1.255) BS01 ADP N/A N/A Q13232 N/A
    10999 8qw3:D (1.255) BS01 ADP N/A N/A Q13232 N/A
    11000 8qw3:E (1.255) BS01 ADP N/A N/A Q13232 N/A

    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).
  • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417