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BioLiP
Download all results in tab-seperated text for 32 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 4nqc:A (2.5) BS01 2LJ ? N/A Q95460 24695216
    2 4nqc:C (2.5) BS01 2LJ ? N/A Q95460 24695216
    3 4nqd:A (2.2) BS01 2LJ ? N/A Q95460 24695216
    4 4nqd:C (2.2) BS01 2LJ ? N/A Q95460 24695216
    5 4pj7:A (2.5) BS01 2LJ ? N/A Q95460 25049336
    6 4pj7:C (2.5) BS01 2LJ ? N/A Q95460 25049336
    7 4pj8:A (3.3) BS01 2LJ ? N/A Q95460 25049336
    8 4pj9:A (2.0) BS01 2LJ ? N/A Q95460 25049336
    9 4pja:A (2.68) BS01 2LJ ? N/A Q95460 25049336
    10 4pja:C (2.68) BS01 2LJ ? N/A Q95460 25049336
    11 4pjb:A (2.85) BS01 2LJ ? N/A Q95460 25049336
    12 4pjb:C (2.85) BS01 2LJ ? N/A Q95460 25049336
    13 4pjc:A (2.5) BS01 2LJ ? N/A Q95460 25049336
    14 4pjc:C (2.5) BS01 2LJ ? N/A Q95460 25049336
    15 4pjd:A (2.78) BS01 2LJ ? N/A Q95460 25049336
    16 4pjd:C (2.78) BS01 2LJ ? N/A Q95460 25049336
    17 5d5m:A (2.2) BS01 2LJ ? N/A Q95460 26795251
    18 5d5m:C (2.2) BS01 2LJ ? N/A Q95460 26795251
    19 5d7j:C (1.97) BS01 2LJ ? N/A Q95460 26795251
    20 5d7j:E (1.97) BS01 2LJ ? N/A Q95460 26795251
    21 5d7l:A (3.4) BS01 2LJ ? N/A Q95460 26795251
    22 5d7l:C (3.4) BS01 2LJ ? N/A Q95460 26795251
    23 6mwr:A (3.3) BS01 2LJ ? N/A Q95460 31857486
    24 6puf:A (1.92) BS01 2LJ ? N/A Q95460 32123373
    25 6puf:C (1.92) BS01 2LJ ? N/A Q95460 32123373
    26 6xqp:A (2.9) BS01 2LJ ? N/A Q95460 32817339
    27 6xqp:C (2.9) BS01 2LJ ? N/A Q95460 32817339
    28 7lli:A (3.2) BS01 2LJ ? N/A Q95460 34845016
    29 7lli:C (3.2) BS01 2LJ ? N/A Q95460 34845016
    30 7zt2:A (2.4) BS01 2LJ ? N/A Q95460 37382893
    31 8vz8:A (3.45) BS01 2LJ ? N/A Q8HWB0 38537698
    32 8vz9:A (3.4) BS01 2LJ ? N/A Q8HWB0 38537698
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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