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BioLiP
Download all results in tab-seperated text for 32 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 4o1o:A (3.27) BS01 25L ? GO:0004540 ... A5H025 24462203
    2 4o1o:A (3.27) BS02 25L ? GO:0004540 ... A5H025 24462203
    3 4o1o:B (3.27) BS01 25L ? GO:0004540 ... A5H025 24462203
    4 4o1o:B (3.27) BS02 25L ? GO:0004540 ... A5H025 24462203
    5 4o1o:C (3.27) BS01 25L ? GO:0004540 ... A5H025 24462203
    6 4o1o:C (3.27) BS02 25L ? GO:0004540 ... A5H025 24462203
    7 4o1o:D (3.27) BS01 25L ? GO:0004540 ... A5H025 24462203
    8 4o1o:D (3.27) BS02 25L ? GO:0004540 ... A5H025 24462203
    9 4o1p:A (2.5) BS04 25L ? GO:0004540 ... A5H025 24462203
    10 4o1p:A (2.5) BS05 25L ? GO:0004540 ... A5H025 24462203
    11 4o1p:B (2.5) BS01 25L ? GO:0004540 ... A5H025 24462203
    12 4o1p:B (2.5) BS05 25L ? GO:0004540 ... A5H025 24462203
    13 4o1p:C (2.5) BS04 25L ? GO:0004540 ... A5H025 24462203
    14 4o1p:C (2.5) BS05 25L ? GO:0004540 ... A5H025 24462203
    15 4o1p:D (2.5) BS01 25L ? GO:0004540 ... A5H025 24462203
    16 4o1p:D (2.5) BS03 25L ? GO:0004540 ... A5H025 24462203
    17 6m12:a (2.4) BS02 25L ? GO:0004540 ... A5H025 32830849
    18 6m12:a (2.4) BS03 25L ? GO:0004540 ... A5H025 32830849
    19 6m12:b (2.4) BS01 25L ? GO:0004540 ... A5H025 32830849
    20 6m12:b (2.4) BS02 25L ? GO:0004540 ... A5H025 32830849
    21 6m13:a (2.56) BS02 25L ? GO:0004540 ... A5H025 32830849
    22 6m13:a (2.56) BS03 25L ? GO:0004540 ... A5H025 32830849
    23 6m13:b (2.56) BS01 25L ? GO:0004540 ... A5H025 32830849
    24 6m13:b (2.56) BS03 25L ? GO:0004540 ... A5H025 32830849
    25 7elw:a (3.55) BS01 25L ? GO:0004540 ... A5H025 N/A
    26 7elw:a (3.55) BS03 25L ? GO:0004540 ... A5H025 N/A
    27 7elw:b (3.55) BS01 25L ? GO:0004540 ... A5H025 N/A
    28 7elw:b (3.55) BS02 25L ? GO:0004540 ... A5H025 N/A
    29 7ucw:A (1.35) BS01 25L 1.3.1.124 GO:0005654 ... Q9CQ62 37676257
    30 7ucw:B (1.35) BS01 25L 1.3.1.124 GO:0005654 ... Q9CQ62 37676257
    31 7ucw:C (1.35) BS01 25L 1.3.1.124 GO:0005654 ... Q9CQ62 37676257
    32 7ucw:D (1.35) BS01 25L 1.3.1.124 GO:0005654 ... Q9CQ62 37676257
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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