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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 594392 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    198201 5b5m:y (3.3) BS07 CRT ? GO:0005515 ... A8ASG6 27933779
    198202 5b5m:z (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198203 5b5m:z (3.3) BS02 CRT ? GO:0005515 ... D2Z0P1 27933779
    198204 5b5m:z (3.3) BS03 BCL ? GO:0005515 ... D2Z0P1 27933779
    198205 5b5n:0 (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198206 5b5n:0 (3.3) BS02 CRT ? GO:0005515 ... D2Z0P1 27933779
    198207 5b5n:0 (3.3) BS03 BCL ? GO:0005515 ... D2Z0P1 27933779
    198208 5b5n:1 (3.3) BS01 BCL ? GO:0005515 ... D2Z0P2 27933779
    198209 5b5n:1 (3.3) BS02 CRT ? GO:0005515 ... D2Z0P2 27933779
    198210 5b5n:1 (3.3) BS03 BCL ? GO:0005515 ... D2Z0P2 27933779
    198211 5b5n:1 (3.3) BS04 BCL ? GO:0005515 ... D2Z0P2 27933779
    198212 5b5n:1 (3.3) BS05 CRT ? GO:0005515 ... D2Z0P2 27933779
    198213 5b5n:2 (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198214 5b5n:2 (3.3) BS02 CRT ? GO:0005515 ... D2Z0P1 27933779
    198215 5b5n:2 (3.3) BS03 BCL ? GO:0005515 ... D2Z0P1 27933779
    198216 5b5n:3 (3.3) BS01 BCL ? GO:0005515 ... D2Z0P2 27933779
    198217 5b5n:3 (3.3) BS02 CRT ? GO:0005515 ... D2Z0P2 27933779
    198218 5b5n:3 (3.3) BS03 BCL ? GO:0005515 ... D2Z0P2 27933779
    198219 5b5n:3 (3.3) BS04 CRT ? GO:0005515 ... D2Z0P2 27933779
    198220 5b5n:4 (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198221 5b5n:4 (3.3) BS02 CRT ? GO:0005515 ... D2Z0P1 27933779
    198222 5b5n:4 (3.3) BS03 BCL ? GO:0005515 ... D2Z0P1 27933779
    198223 5b5n:5 (3.3) BS01 BCL ? GO:0005515 ... D2Z0P2 27933779
    198224 5b5n:5 (3.3) BS02 BCL ? GO:0005515 ... D2Z0P2 27933779
    198225 5b5n:5 (3.3) BS03 CRT ? GO:0005515 ... D2Z0P2 27933779
    198226 5b5n:5 (3.3) BS04 CRT ? GO:0005515 ... D2Z0P2 27933779
    198227 5b5n:6 (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198228 5b5n:6 (3.3) BS02 BCL ? GO:0005515 ... D2Z0P1 27933779
    198229 5b5n:6 (3.3) BS03 CRT ? GO:0005515 ... D2Z0P1 27933779
    198230 5b5n:6 (3.3) BS04 BCL ? GO:0005515 ... D2Z0P1 27933779
    198231 5b5n:7 (3.3) BS01 CRT ? GO:0005515 ... D2Z0P2 27933779
    198232 5b5n:7 (3.3) BS02 BCL ? GO:0005515 ... D2Z0P2 27933779
    198233 5b5n:7 (3.3) BS03 CRT ? GO:0005515 ... D2Z0P2 27933779
    198234 5b5n:7 (3.3) BS04 BCL ? GO:0005515 ... D2Z0P2 27933779
    198235 5b5n:8 (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198236 5b5n:8 (3.3) BS02 CRT ? GO:0005515 ... D2Z0P1 27933779
    198237 5b5n:8 (3.3) BS03 BCL ? GO:0005515 ... D2Z0P1 27933779
    198238 5b5n:9 (3.3) BS01 BCL ? GO:0005515 ... D2Z0P2 27933779
    198239 5b5n:9 (3.3) BS02 CRT ? GO:0005515 ... D2Z0P2 27933779
    198240 5b5n:9 (3.3) BS03 CRT ? GO:0005515 ... D2Z0P2 27933779
    198241 5b5n:9 (3.3) BS04 BCL ? GO:0005515 ... D2Z0P2 27933779
    198242 5b5n:9 (3.3) BS05 CRT ? GO:0005515 ... D2Z0P2 27933779
    198243 5b5n:9 (3.3) BS06 BCL ? GO:0005515 ... D2Z0P2 27933779
    198244 5b5n:A (3.3) BS01 BCL ? GO:0005515 ... D2Z0P2 27933779
    198245 5b5n:A (3.3) BS02 BCL ? GO:0005515 ... D2Z0P2 27933779
    198246 5b5n:A (3.3) BS03 CRT ? GO:0005515 ... D2Z0P2 27933779
    198247 5b5n:A (3.3) BS04 CRT ? GO:0005515 ... D2Z0P2 27933779
    198248 5b5n:A (3.3) BS05 CRT ? GO:0005515 ... D2Z0P2 27933779
    198249 5b5n:AA (3.3) BS01 CRT ? GO:0005515 ... D2Z0P2 27933779
    198250 5b5n:AA (3.3) BS02 CRT ? GO:0005515 ... D2Z0P2 27933779
    198251 5b5n:AA (3.3) BS03 BCL ? GO:0005515 ... D2Z0P2 27933779
    198252 5b5n:AA (3.3) BS04 BCL ? GO:0005515 ... D2Z0P2 27933779
    198253 5b5n:AA (3.3) BS05 CRT ? GO:0005515 ... D2Z0P2 27933779
    198254 5b5n:AA (3.3) BS06 CRT ? GO:0005515 ... D2Z0P2 27933779
    198255 5b5n:AB (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198256 5b5n:AB (3.3) BS02 BCL ? GO:0005515 ... D2Z0P1 27933779
    198257 5b5n:AB (3.3) BS03 CRT ? GO:0005515 ... D2Z0P1 27933779
    198258 5b5n:AC (3.3) BS01 CRT ? GO:0005515 ... D2Z0P2 27933779
    198259 5b5n:AC (3.3) BS02 BCL ? GO:0005515 ... D2Z0P2 27933779
    198260 5b5n:AC (3.3) BS03 BCL ? GO:0005515 ... D2Z0P2 27933779
    198261 5b5n:AC (3.3) BS04 CRT ? GO:0005515 ... D2Z0P2 27933779
    198262 5b5n:AD (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198263 5b5n:AD (3.3) BS02 BCL ? GO:0005515 ... D2Z0P1 27933779
    198264 5b5n:AD (3.3) BS03 CRT ? GO:0005515 ... D2Z0P1 27933779
    198265 5b5n:AE (3.3) BS01 CRT ? GO:0005515 ... D2Z0P2 27933779
    198266 5b5n:AE (3.3) BS02 PGW ? GO:0005515 ... D2Z0P2 27933779
    198267 5b5n:AE (3.3) BS03 BCL ? GO:0005515 ... D2Z0P2 27933779
    198268 5b5n:AE (3.3) BS04 BCL ? GO:0005515 ... D2Z0P2 27933779
    198269 5b5n:AE (3.3) BS05 CRT ? GO:0005515 ... D2Z0P2 27933779
    198270 5b5n:AE (3.3) BS06 CRT ? GO:0005515 ... D2Z0P2 27933779
    198271 5b5n:AF (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198272 5b5n:AF (3.3) BS02 BCL ? GO:0005515 ... D2Z0P1 27933779
    198273 5b5n:AF (3.3) BS03 CRT ? GO:0005515 ... D2Z0P1 27933779
    198274 5b5n:AG (3.3) BS01 CRT ? GO:0005515 ... D2Z0P2 27933779
    198275 5b5n:AG (3.3) BS02 BCL ? GO:0005515 ... D2Z0P2 27933779
    198276 5b5n:AG (3.3) BS03 BCL ? GO:0005515 ... D2Z0P2 27933779
    198277 5b5n:AG (3.3) BS04 CRT ? GO:0005515 ... D2Z0P2 27933779
    198278 5b5n:AG (3.3) BS05 CRT ? GO:0005515 ... D2Z0P2 27933779
    198279 5b5n:AH (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198280 5b5n:AH (3.3) BS02 BCL ? GO:0005515 ... D2Z0P1 27933779
    198281 5b5n:AH (3.3) BS03 CRT ? GO:0005515 ... D2Z0P1 27933779
    198282 5b5n:AI (3.3) BS01 CRT ? GO:0005515 ... D2Z0P2 27933779
    198283 5b5n:AI (3.3) BS02 BCL ? GO:0005515 ... D2Z0P2 27933779
    198284 5b5n:AI (3.3) BS03 BCL ? GO:0005515 ... D2Z0P2 27933779
    198285 5b5n:AI (3.3) BS04 CRT ? GO:0005515 ... D2Z0P2 27933779
    198286 5b5n:AI (3.3) BS05 CRT ? GO:0005515 ... D2Z0P2 27933779
    198287 5b5n:AJ (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198288 5b5n:AJ (3.3) BS02 BCL ? GO:0005515 ... D2Z0P1 27933779
    198289 5b5n:AJ (3.3) BS03 CRT ? GO:0005515 ... D2Z0P1 27933779
    198290 5b5n:AK (3.3) BS01 BCL ? GO:0005515 ... D2Z0P2 27933779
    198291 5b5n:AK (3.3) BS02 CRT ? GO:0005515 ... D2Z0P2 27933779
    198292 5b5n:AK (3.3) BS03 BCL ? GO:0005515 ... D2Z0P2 27933779
    198293 5b5n:AK (3.3) BS04 BCL ? GO:0005515 ... D2Z0P2 27933779
    198294 5b5n:AK (3.3) BS05 CRT ? GO:0005515 ... D2Z0P2 27933779
    198295 5b5n:AL (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198296 5b5n:AL (3.3) BS02 CRT ? GO:0005515 ... D2Z0P1 27933779
    198297 5b5n:AL (3.3) BS03 BCL ? GO:0005515 ... D2Z0P1 27933779
    198298 5b5n:B (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198299 5b5n:B (3.3) BS02 BCL ? GO:0005515 ... D2Z0P1 27933779
    198300 5b5n:B (3.3) BS03 CRT ? GO:0005515 ... D2Z0P1 27933779
    198301 5b5n:C (3.3) BS01 HEM ? GO:0005506 ... D2Z0P5 27933779
    198302 5b5n:C (3.3) BS02 HEM ? GO:0005506 ... D2Z0P5 27933779
    198303 5b5n:C (3.3) BS03 HEM ? GO:0005506 ... D2Z0P5 27933779
    198304 5b5n:C (3.3) BS04 HEM ? GO:0005506 ... D2Z0P5 27933779
    198305 5b5n:D (3.3) BS01 BCL ? GO:0005515 ... D2Z0P2 27933779
    198306 5b5n:D (3.3) BS02 BCL ? GO:0005515 ... D2Z0P2 27933779
    198307 5b5n:D (3.3) BS03 CRT ? GO:0005515 ... D2Z0P2 27933779
    198308 5b5n:D (3.3) BS04 CRT ? GO:0005515 ... D2Z0P2 27933779
    198309 5b5n:E (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198310 5b5n:E (3.3) BS02 BCL ? GO:0005515 ... D2Z0P1 27933779
    198311 5b5n:E (3.3) BS03 CRT ? GO:0005515 ... D2Z0P1 27933779
    198312 5b5n:F (3.3) BS01 CRT ? GO:0005515 ... D2Z0P2 27933779
    198313 5b5n:F (3.3) BS02 BCL ? GO:0005515 ... D2Z0P2 27933779
    198314 5b5n:F (3.3) BS03 CRT ? GO:0005515 ... D2Z0P2 27933779
    198315 5b5n:F (3.3) BS04 BCL ? GO:0005515 ... D2Z0P2 27933779
    198316 5b5n:F (3.3) BS05 CRT ? GO:0005515 ... D2Z0P2 27933779
    198317 5b5n:G (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198318 5b5n:G (3.3) BS02 CRT ? GO:0005515 ... D2Z0P1 27933779
    198319 5b5n:G (3.3) BS03 BCL ? GO:0005515 ... D2Z0P1 27933779
    198320 5b5n:I (3.3) BS01 CRT ? GO:0005515 ... D2Z0P2 27933779
    198321 5b5n:I (3.3) BS02 BCL ? GO:0005515 ... D2Z0P2 27933779
    198322 5b5n:I (3.3) BS03 CRT ? GO:0005515 ... D2Z0P2 27933779
    198323 5b5n:I (3.3) BS04 BCL ? GO:0005515 ... D2Z0P2 27933779
    198324 5b5n:I (3.3) BS05 CRT ? GO:0005515 ... D2Z0P2 27933779
    198325 5b5n:J (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198326 5b5n:J (3.3) BS02 CRT ? GO:0005515 ... D2Z0P1 27933779
    198327 5b5n:J (3.3) BS03 BCL ? GO:0005515 ... D2Z0P1 27933779
    198328 5b5n:K (3.3) BS01 CRT ? GO:0005515 ... D2Z0P2 27933779
    198329 5b5n:K (3.3) BS02 BCL ? GO:0005515 ... D2Z0P2 27933779
    198330 5b5n:K (3.3) BS03 BCL ? GO:0005515 ... D2Z0P2 27933779
    198331 5b5n:K (3.3) BS04 CRT ? GO:0005515 ... D2Z0P2 27933779
    198332 5b5n:L (3.3) BS01 BCL ? GO:0005515 ... D2Z0P3 27933779
    198333 5b5n:L (3.3) BS02 BPH ? GO:0005515 ... D2Z0P3 27933779
    198334 5b5n:L (3.3) BS03 BCL ? GO:0005515 ... D2Z0P3 27933779
    198335 5b5n:L (3.3) BS04 UQ8 ? GO:0005515 ... D2Z0P3 27933779
    198336 5b5n:L (3.3) BS05 FE ? GO:0005515 ... D2Z0P3 27933779
    198337 5b5n:L (3.3) BS06 BCL ? GO:0005515 ... D2Z0P3 27933779
    198338 5b5n:L (3.3) BS07 BCL ? GO:0005515 ... D2Z0P3 27933779
    198339 5b5n:L (3.3) BS08 BPH ? GO:0005515 ... D2Z0P3 27933779
    198340 5b5n:L (3.3) BS09 MQ8 ? GO:0005515 ... D2Z0P3 27933779
    198341 5b5n:M (3.3) BS01 HEM ? GO:0005515 ... A8ASG6 27933779
    198342 5b5n:M (3.3) BS02 BPH ? GO:0005515 ... A8ASG6 27933779
    198343 5b5n:M (3.3) BS03 BCL ? GO:0005515 ... A8ASG6 27933779
    198344 5b5n:M (3.3) BS04 FE ? GO:0005515 ... A8ASG6 27933779
    198345 5b5n:M (3.3) BS05 BCL ? GO:0005515 ... A8ASG6 27933779
    198346 5b5n:M (3.3) BS06 BCL ? GO:0005515 ... A8ASG6 27933779
    198347 5b5n:M (3.3) BS07 BPH ? GO:0005515 ... A8ASG6 27933779
    198348 5b5n:M (3.3) BS08 MQ8 ? GO:0005515 ... A8ASG6 27933779
    198349 5b5n:M (3.3) BS09 CRT ? GO:0005515 ... A8ASG6 27933779
    198350 5b5n:M (3.3) BS10 PGW ? GO:0005515 ... A8ASG6 27933779
    198351 5b5n:N (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198352 5b5n:N (3.3) BS02 BCL ? GO:0005515 ... D2Z0P1 27933779
    198353 5b5n:N (3.3) BS03 CRT ? GO:0005515 ... D2Z0P1 27933779
    198354 5b5n:O (3.3) BS01 CRT ? GO:0005515 ... D2Z0P2 27933779
    198355 5b5n:O (3.3) BS02 BCL ? GO:0005515 ... D2Z0P2 27933779
    198356 5b5n:O (3.3) BS03 BCL ? GO:0005515 ... D2Z0P2 27933779
    198357 5b5n:O (3.3) BS04 CRT ? GO:0005515 ... D2Z0P2 27933779
    198358 5b5n:P (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198359 5b5n:P (3.3) BS02 BCL ? GO:0005515 ... D2Z0P1 27933779
    198360 5b5n:P (3.3) BS03 CRT ? GO:0005515 ... D2Z0P1 27933779
    198361 5b5n:Q (3.3) BS01 CRT ? GO:0005515 ... D2Z0P2 27933779
    198362 5b5n:Q (3.3) BS02 BCL ? GO:0005515 ... D2Z0P2 27933779
    198363 5b5n:Q (3.3) BS03 CRT ? GO:0005515 ... D2Z0P2 27933779
    198364 5b5n:Q (3.3) BS04 BCL ? GO:0005515 ... D2Z0P2 27933779
    198365 5b5n:Q (3.3) BS05 BCL ? GO:0005515 ... D2Z0P2 27933779
    198366 5b5n:Q (3.3) BS06 CRT ? GO:0005515 ... D2Z0P2 27933779
    198367 5b5n:R (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198368 5b5n:R (3.3) BS02 CRT ? GO:0005515 ... D2Z0P1 27933779
    198369 5b5n:R (3.3) BS03 BCL ? GO:0005515 ... D2Z0P1 27933779
    198370 5b5n:S (3.3) BS01 CRT ? GO:0005515 ... D2Z0P2 27933779
    198371 5b5n:S (3.3) BS02 PGW ? GO:0005515 ... D2Z0P2 27933779
    198372 5b5n:S (3.3) BS03 BCL ? GO:0005515 ... D2Z0P2 27933779
    198373 5b5n:S (3.3) BS04 CRT ? GO:0005515 ... D2Z0P2 27933779
    198374 5b5n:S (3.3) BS05 BCL ? GO:0005515 ... D2Z0P2 27933779
    198375 5b5n:S (3.3) BS06 CRT ? GO:0005515 ... D2Z0P2 27933779
    198376 5b5n:T (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198377 5b5n:T (3.3) BS02 CRT ? GO:0005515 ... D2Z0P1 27933779
    198378 5b5n:T (3.3) BS03 BCL ? GO:0005515 ... D2Z0P1 27933779
    198379 5b5n:U (3.3) BS01 CRT ? GO:0005515 ... D2Z0P2 27933779
    198380 5b5n:U (3.3) BS02 BCL ? GO:0005515 ... D2Z0P2 27933779
    198381 5b5n:U (3.3) BS03 CRT ? GO:0005515 ... D2Z0P2 27933779
    198382 5b5n:U (3.3) BS04 BCL ? GO:0005515 ... D2Z0P2 27933779
    198383 5b5n:U (3.3) BS05 BCL ? GO:0005515 ... D2Z0P2 27933779
    198384 5b5n:U (3.3) BS06 CRT ? GO:0005515 ... D2Z0P2 27933779
    198385 5b5n:V (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198386 5b5n:V (3.3) BS02 CRT ? GO:0005515 ... D2Z0P1 27933779
    198387 5b5n:V (3.3) BS03 BCL ? GO:0005515 ... D2Z0P1 27933779
    198388 5b5n:W (3.3) BS01 CRT ? GO:0005515 ... D2Z0P2 27933779
    198389 5b5n:W (3.3) BS02 BCL ? GO:0005515 ... D2Z0P2 27933779
    198390 5b5n:W (3.3) BS03 CRT ? GO:0005515 ... D2Z0P2 27933779
    198391 5b5n:W (3.3) BS04 BCL ? GO:0005515 ... D2Z0P2 27933779
    198392 5b5n:W (3.3) BS05 CRT ? GO:0005515 ... D2Z0P2 27933779
    198393 5b5n:X (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198394 5b5n:X (3.3) BS02 CRT ? GO:0005515 ... D2Z0P1 27933779
    198395 5b5n:X (3.3) BS03 BCL ? GO:0005515 ... D2Z0P1 27933779
    198396 5b5n:Y (3.3) BS01 BCL ? GO:0005515 ... D2Z0P2 27933779
    198397 5b5n:Y (3.3) BS02 CRT ? GO:0005515 ... D2Z0P2 27933779
    198398 5b5n:Y (3.3) BS03 BCL ? GO:0005515 ... D2Z0P2 27933779
    198399 5b5n:Y (3.3) BS04 CRT ? GO:0005515 ... D2Z0P2 27933779
    198400 5b5n:Z (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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