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BioLiP
Download all results in tab-seperated text for 594392 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    198001 5b5m:AL (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198002 5b5m:AL (3.3) BS02 CRT ? GO:0005515 ... D2Z0P1 27933779
    198003 5b5m:AL (3.3) BS03 BCL ? GO:0005515 ... D2Z0P1 27933779
    198004 5b5m:B (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198005 5b5m:B (3.3) BS02 BCL ? GO:0005515 ... D2Z0P1 27933779
    198006 5b5m:B (3.3) BS03 CRT ? GO:0005515 ... D2Z0P1 27933779
    198007 5b5m:C (3.3) BS01 HEM ? GO:0005506 ... D2Z0P5 27933779
    198008 5b5m:C (3.3) BS02 HEM ? GO:0005506 ... D2Z0P5 27933779
    198009 5b5m:C (3.3) BS03 HEM ? GO:0005506 ... D2Z0P5 27933779
    198010 5b5m:C (3.3) BS04 HEM ? GO:0005506 ... D2Z0P5 27933779
    198011 5b5m:D (3.3) BS01 BCL ? GO:0005515 ... D2Z0P2 27933779
    198012 5b5m:D (3.3) BS02 BCL ? GO:0005515 ... D2Z0P2 27933779
    198013 5b5m:D (3.3) BS03 CRT ? GO:0005515 ... D2Z0P2 27933779
    198014 5b5m:D (3.3) BS04 CRT ? GO:0005515 ... D2Z0P2 27933779
    198015 5b5m:E (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198016 5b5m:E (3.3) BS02 BCL ? GO:0005515 ... D2Z0P1 27933779
    198017 5b5m:E (3.3) BS03 CRT ? GO:0005515 ... D2Z0P1 27933779
    198018 5b5m:F (3.3) BS01 CRT ? GO:0005515 ... D2Z0P2 27933779
    198019 5b5m:F (3.3) BS02 BCL ? GO:0005515 ... D2Z0P2 27933779
    198020 5b5m:F (3.3) BS03 CRT ? GO:0005515 ... D2Z0P2 27933779
    198021 5b5m:F (3.3) BS04 BCL ? GO:0005515 ... D2Z0P2 27933779
    198022 5b5m:F (3.3) BS05 CRT ? GO:0005515 ... D2Z0P2 27933779
    198023 5b5m:G (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198024 5b5m:G (3.3) BS02 CRT ? GO:0005515 ... D2Z0P1 27933779
    198025 5b5m:G (3.3) BS03 BCL ? GO:0005515 ... D2Z0P1 27933779
    198026 5b5m:I (3.3) BS01 CRT ? GO:0005515 ... D2Z0P2 27933779
    198027 5b5m:I (3.3) BS02 BCL ? GO:0005515 ... D2Z0P2 27933779
    198028 5b5m:I (3.3) BS03 CRT ? GO:0005515 ... D2Z0P2 27933779
    198029 5b5m:I (3.3) BS04 BCL ? GO:0005515 ... D2Z0P2 27933779
    198030 5b5m:I (3.3) BS05 CRT ? GO:0005515 ... D2Z0P2 27933779
    198031 5b5m:J (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198032 5b5m:J (3.3) BS02 CRT ? GO:0005515 ... D2Z0P1 27933779
    198033 5b5m:J (3.3) BS03 BCL ? GO:0005515 ... D2Z0P1 27933779
    198034 5b5m:K (3.3) BS01 BCL ? GO:0005515 ... D2Z0P2 27933779
    198035 5b5m:K (3.3) BS02 CRT ? GO:0005515 ... D2Z0P2 27933779
    198036 5b5m:K (3.3) BS03 BCL ? GO:0005515 ... D2Z0P2 27933779
    198037 5b5m:L (3.3) BS01 BCL ? GO:0005515 ... D2Z0P3 27933779
    198038 5b5m:L (3.3) BS02 BPH ? GO:0005515 ... D2Z0P3 27933779
    198039 5b5m:L (3.3) BS03 BCL ? GO:0005515 ... D2Z0P3 27933779
    198040 5b5m:L (3.3) BS04 UQ8 ? GO:0005515 ... D2Z0P3 27933779
    198041 5b5m:L (3.3) BS05 BCL ? GO:0005515 ... D2Z0P3 27933779
    198042 5b5m:L (3.3) BS06 FE ? GO:0005515 ... D2Z0P3 27933779
    198043 5b5m:L (3.3) BS07 BCL ? GO:0005515 ... D2Z0P3 27933779
    198044 5b5m:L (3.3) BS08 BPH ? GO:0005515 ... D2Z0P3 27933779
    198045 5b5m:M (3.3) BS01 HEM ? GO:0005515 ... A8ASG6 27933779
    198046 5b5m:M (3.3) BS02 BPH ? GO:0005515 ... A8ASG6 27933779
    198047 5b5m:M (3.3) BS03 BCL ? GO:0005515 ... A8ASG6 27933779
    198048 5b5m:M (3.3) BS04 FE ? GO:0005515 ... A8ASG6 27933779
    198049 5b5m:M (3.3) BS05 BCL ? GO:0005515 ... A8ASG6 27933779
    198050 5b5m:M (3.3) BS06 BPH ? GO:0005515 ... A8ASG6 27933779
    198051 5b5m:M (3.3) BS07 MQ8 ? GO:0005515 ... A8ASG6 27933779
    198052 5b5m:M (3.3) BS08 CRT ? GO:0005515 ... A8ASG6 27933779
    198053 5b5m:M (3.3) BS09 PGW ? GO:0005515 ... A8ASG6 27933779
    198054 5b5m:N (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198055 5b5m:N (3.3) BS02 CRT ? GO:0005515 ... D2Z0P1 27933779
    198056 5b5m:N (3.3) BS03 BCL ? GO:0005515 ... D2Z0P1 27933779
    198057 5b5m:O (3.3) BS01 CRT ? GO:0005515 ... D2Z0P2 27933779
    198058 5b5m:O (3.3) BS02 BCL ? GO:0005515 ... D2Z0P2 27933779
    198059 5b5m:O (3.3) BS03 BCL ? GO:0005515 ... D2Z0P2 27933779
    198060 5b5m:O (3.3) BS04 CRT ? GO:0005515 ... D2Z0P2 27933779
    198061 5b5m:O (3.3) BS05 CRT ? GO:0005515 ... D2Z0P2 27933779
    198062 5b5m:P (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198063 5b5m:P (3.3) BS02 BCL ? GO:0005515 ... D2Z0P1 27933779
    198064 5b5m:P (3.3) BS03 CRT ? GO:0005515 ... D2Z0P1 27933779
    198065 5b5m:Q (3.3) BS01 CRT ? GO:0005515 ... D2Z0P2 27933779
    198066 5b5m:Q (3.3) BS02 BCL ? GO:0005515 ... D2Z0P2 27933779
    198067 5b5m:Q (3.3) BS03 CRT ? GO:0005515 ... D2Z0P2 27933779
    198068 5b5m:Q (3.3) BS04 BCL ? GO:0005515 ... D2Z0P2 27933779
    198069 5b5m:Q (3.3) BS05 CRT ? GO:0005515 ... D2Z0P2 27933779
    198070 5b5m:R (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198071 5b5m:R (3.3) BS02 CRT ? GO:0005515 ... D2Z0P1 27933779
    198072 5b5m:R (3.3) BS03 BCL ? GO:0005515 ... D2Z0P1 27933779
    198073 5b5m:S (3.3) BS01 CRT ? GO:0005515 ... D2Z0P2 27933779
    198074 5b5m:S (3.3) BS02 PGW ? GO:0005515 ... D2Z0P2 27933779
    198075 5b5m:S (3.3) BS03 BCL ? GO:0005515 ... D2Z0P2 27933779
    198076 5b5m:S (3.3) BS04 CRT ? GO:0005515 ... D2Z0P2 27933779
    198077 5b5m:S (3.3) BS05 BCL ? GO:0005515 ... D2Z0P2 27933779
    198078 5b5m:S (3.3) BS06 CRT ? GO:0005515 ... D2Z0P2 27933779
    198079 5b5m:T (3.3) BS01 CRT ? GO:0005515 ... D2Z0P1 27933779
    198080 5b5m:T (3.3) BS02 BCL ? GO:0005515 ... D2Z0P1 27933779
    198081 5b5m:U (3.3) BS01 CRT ? GO:0005515 ... D2Z0P2 27933779
    198082 5b5m:U (3.3) BS02 BCL ? GO:0005515 ... D2Z0P2 27933779
    198083 5b5m:U (3.3) BS03 CRT ? GO:0005515 ... D2Z0P2 27933779
    198084 5b5m:U (3.3) BS04 BCL ? GO:0005515 ... D2Z0P2 27933779
    198085 5b5m:U (3.3) BS05 CRT ? GO:0005515 ... D2Z0P2 27933779
    198086 5b5m:V (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198087 5b5m:V (3.3) BS02 CRT ? GO:0005515 ... D2Z0P1 27933779
    198088 5b5m:V (3.3) BS03 BCL ? GO:0005515 ... D2Z0P1 27933779
    198089 5b5m:W (3.3) BS01 CRT ? GO:0005515 ... D2Z0P2 27933779
    198090 5b5m:W (3.3) BS02 BCL ? GO:0005515 ... D2Z0P2 27933779
    198091 5b5m:W (3.3) BS03 CRT ? GO:0005515 ... D2Z0P2 27933779
    198092 5b5m:W (3.3) BS04 BCL ? GO:0005515 ... D2Z0P2 27933779
    198093 5b5m:W (3.3) BS05 CRT ? GO:0005515 ... D2Z0P2 27933779
    198094 5b5m:X (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198095 5b5m:X (3.3) BS02 CRT ? GO:0005515 ... D2Z0P1 27933779
    198096 5b5m:X (3.3) BS03 BCL ? GO:0005515 ... D2Z0P1 27933779
    198097 5b5m:Y (3.3) BS01 CRT ? GO:0005515 ... D2Z0P2 27933779
    198098 5b5m:Y (3.3) BS02 BCL ? GO:0005515 ... D2Z0P2 27933779
    198099 5b5m:Y (3.3) BS03 CRT ? GO:0005515 ... D2Z0P2 27933779
    198100 5b5m:Y (3.3) BS04 BCL ? GO:0005515 ... D2Z0P2 27933779
    198101 5b5m:Y (3.3) BS05 CRT ? GO:0005515 ... D2Z0P2 27933779
    198102 5b5m:Z (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198103 5b5m:Z (3.3) BS02 CRT ? GO:0005515 ... D2Z0P1 27933779
    198104 5b5m:Z (3.3) BS03 BCL ? GO:0005515 ... D2Z0P1 27933779
    198105 5b5m:c (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198106 5b5m:c (3.3) BS02 CRT ? GO:0005515 ... D2Z0P1 27933779
    198107 5b5m:c (3.3) BS03 BCL ? GO:0005515 ... D2Z0P1 27933779
    198108 5b5m:d (3.3) BS01 BCL ? GO:0005515 ... D2Z0P2 27933779
    198109 5b5m:d (3.3) BS02 CRT ? GO:0005515 ... D2Z0P2 27933779
    198110 5b5m:d (3.3) BS03 BCL ? GO:0005515 ... D2Z0P2 27933779
    198111 5b5m:d (3.3) BS04 BCL ? GO:0005515 ... D2Z0P2 27933779
    198112 5b5m:d (3.3) BS05 CRT ? GO:0005515 ... D2Z0P2 27933779
    198113 5b5m:e (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198114 5b5m:e (3.3) BS02 CRT ? GO:0005515 ... D2Z0P1 27933779
    198115 5b5m:e (3.3) BS03 BCL ? GO:0005515 ... D2Z0P1 27933779
    198116 5b5m:f (3.3) BS01 CRT ? GO:0005515 ... D2Z0P2 27933779
    198117 5b5m:f (3.3) BS02 BCL ? GO:0005515 ... D2Z0P2 27933779
    198118 5b5m:f (3.3) BS03 CRT ? GO:0005515 ... D2Z0P2 27933779
    198119 5b5m:f (3.3) BS04 BCL ? GO:0005515 ... D2Z0P2 27933779
    198120 5b5m:f (3.3) BS05 CRT ? GO:0005515 ... D2Z0P2 27933779
    198121 5b5m:g (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198122 5b5m:g (3.3) BS02 CRT ? GO:0005515 ... D2Z0P1 27933779
    198123 5b5m:g (3.3) BS03 BCL ? GO:0005515 ... D2Z0P1 27933779
    198124 5b5m:h (3.3) BS01 CRT ? GO:0005515 ... D2Z0P2 27933779
    198125 5b5m:h (3.3) BS02 BCL ? GO:0005515 ... D2Z0P2 27933779
    198126 5b5m:h (3.3) BS03 CRT ? GO:0005515 ... D2Z0P2 27933779
    198127 5b5m:h (3.3) BS04 BCL ? GO:0005515 ... D2Z0P2 27933779
    198128 5b5m:i (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198129 5b5m:i (3.3) BS02 CRT ? GO:0005515 ... D2Z0P1 27933779
    198130 5b5m:i (3.3) BS03 BCL ? GO:0005515 ... D2Z0P1 27933779
    198131 5b5m:j (3.3) BS01 CRT ? GO:0005515 ... D2Z0P2 27933779
    198132 5b5m:j (3.3) BS02 BCL ? GO:0005515 ... D2Z0P2 27933779
    198133 5b5m:j (3.3) BS03 CRT ? GO:0005515 ... D2Z0P2 27933779
    198134 5b5m:j (3.3) BS04 BCL ? GO:0005515 ... D2Z0P2 27933779
    198135 5b5m:j (3.3) BS05 CRT ? GO:0005515 ... D2Z0P2 27933779
    198136 5b5m:k (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198137 5b5m:k (3.3) BS02 CRT ? GO:0005515 ... D2Z0P1 27933779
    198138 5b5m:k (3.3) BS03 BCL ? GO:0005515 ... D2Z0P1 27933779
    198139 5b5m:l (3.3) BS01 BCL ? GO:0005515 ... D2Z0P2 27933779
    198140 5b5m:l (3.3) BS02 CRT ? GO:0005515 ... D2Z0P2 27933779
    198141 5b5m:l (3.3) BS03 CRT ? GO:0005515 ... D2Z0P2 27933779
    198142 5b5m:l (3.3) BS04 BCL ? GO:0005515 ... D2Z0P2 27933779
    198143 5b5m:l (3.3) BS05 CRT ? GO:0005515 ... D2Z0P2 27933779
    198144 5b5m:l (3.3) BS06 BCL ? GO:0005515 ... D2Z0P2 27933779
    198145 5b5m:m (3.3) BS01 BCL ? GO:0005515 ... D2Z0P2 27933779
    198146 5b5m:m (3.3) BS02 BCL ? GO:0005515 ... D2Z0P2 27933779
    198147 5b5m:m (3.3) BS03 CRT ? GO:0005515 ... D2Z0P2 27933779
    198148 5b5m:m (3.3) BS04 CRT ? GO:0005515 ... D2Z0P2 27933779
    198149 5b5m:m (3.3) BS05 CRT ? GO:0005515 ... D2Z0P2 27933779
    198150 5b5m:n (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198151 5b5m:n (3.3) BS02 BCL ? GO:0005515 ... D2Z0P1 27933779
    198152 5b5m:n (3.3) BS03 CRT ? GO:0005515 ... D2Z0P1 27933779
    198153 5b5m:o (3.3) BS01 HEM ? GO:0005506 ... D2Z0P5 27933779
    198154 5b5m:o (3.3) BS02 HEM ? GO:0005506 ... D2Z0P5 27933779
    198155 5b5m:o (3.3) BS03 HEM ? GO:0005506 ... D2Z0P5 27933779
    198156 5b5m:o (3.3) BS04 HEM ? GO:0005506 ... D2Z0P5 27933779
    198157 5b5m:p (3.3) BS01 CRT ? GO:0005515 ... D2Z0P2 27933779
    198158 5b5m:p (3.3) BS02 BCL ? GO:0005515 ... D2Z0P2 27933779
    198159 5b5m:p (3.3) BS03 CRT ? GO:0005515 ... D2Z0P2 27933779
    198160 5b5m:p (3.3) BS04 BCL ? GO:0005515 ... D2Z0P2 27933779
    198161 5b5m:p (3.3) BS05 CRT ? GO:0005515 ... D2Z0P2 27933779
    198162 5b5m:q (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198163 5b5m:q (3.3) BS02 CRT ? GO:0005515 ... D2Z0P1 27933779
    198164 5b5m:q (3.3) BS03 BCL ? GO:0005515 ... D2Z0P1 27933779
    198165 5b5m:r (3.3) BS01 CRT ? GO:0005515 ... D2Z0P2 27933779
    198166 5b5m:r (3.3) BS02 BCL ? GO:0005515 ... D2Z0P2 27933779
    198167 5b5m:r (3.3) BS03 CRT ? GO:0005515 ... D2Z0P2 27933779
    198168 5b5m:r (3.3) BS04 BCL ? GO:0005515 ... D2Z0P2 27933779
    198169 5b5m:r (3.3) BS05 BCL ? GO:0005515 ... D2Z0P2 27933779
    198170 5b5m:s (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198171 5b5m:s (3.3) BS02 CRT ? GO:0005515 ... D2Z0P1 27933779
    198172 5b5m:s (3.3) BS03 BCL ? GO:0005515 ... D2Z0P1 27933779
    198173 5b5m:u (3.3) BS01 CRT ? GO:0005515 ... D2Z0P2 27933779
    198174 5b5m:u (3.3) BS02 BCL ? GO:0005515 ... D2Z0P2 27933779
    198175 5b5m:u (3.3) BS03 CRT ? GO:0005515 ... D2Z0P2 27933779
    198176 5b5m:u (3.3) BS04 BCL ? GO:0005515 ... D2Z0P2 27933779
    198177 5b5m:u (3.3) BS05 BCL ? GO:0005515 ... D2Z0P2 27933779
    198178 5b5m:u (3.3) BS06 CRT ? GO:0005515 ... D2Z0P2 27933779
    198179 5b5m:v (3.3) BS01 BCL ? GO:0005515 ... D2Z0P1 27933779
    198180 5b5m:v (3.3) BS02 CRT ? GO:0005515 ... D2Z0P1 27933779
    198181 5b5m:v (3.3) BS03 BCL ? GO:0005515 ... D2Z0P1 27933779
    198182 5b5m:w (3.3) BS01 CRT ? GO:0005515 ... D2Z0P2 27933779
    198183 5b5m:w (3.3) BS02 BCL ? GO:0005515 ... D2Z0P2 27933779
    198184 5b5m:w (3.3) BS03 CRT ? GO:0005515 ... D2Z0P2 27933779
    198185 5b5m:w (3.3) BS04 BCL ? GO:0005515 ... D2Z0P2 27933779
    198186 5b5m:w (3.3) BS05 CRT ? GO:0005515 ... D2Z0P2 27933779
    198187 5b5m:x (3.3) BS01 BCL ? GO:0005515 ... D2Z0P3 27933779
    198188 5b5m:x (3.3) BS02 BPH ? GO:0005515 ... D2Z0P3 27933779
    198189 5b5m:x (3.3) BS03 BCL ? GO:0005515 ... D2Z0P3 27933779
    198190 5b5m:x (3.3) BS04 UQ8 ? GO:0005515 ... D2Z0P3 27933779
    198191 5b5m:x (3.3) BS05 BCL ? GO:0005515 ... D2Z0P3 27933779
    198192 5b5m:x (3.3) BS06 FE ? GO:0005515 ... D2Z0P3 27933779
    198193 5b5m:x (3.3) BS07 BCL ? GO:0005515 ... D2Z0P3 27933779
    198194 5b5m:x (3.3) BS08 BPH ? GO:0005515 ... D2Z0P3 27933779
    198195 5b5m:y (3.3) BS01 BPH ? GO:0005515 ... A8ASG6 27933779
    198196 5b5m:y (3.3) BS02 BCL ? GO:0005515 ... A8ASG6 27933779
    198197 5b5m:y (3.3) BS03 FE ? GO:0005515 ... A8ASG6 27933779
    198198 5b5m:y (3.3) BS04 BCL ? GO:0005515 ... A8ASG6 27933779
    198199 5b5m:y (3.3) BS05 BPH ? GO:0005515 ... A8ASG6 27933779
    198200 5b5m:y (3.3) BS06 MQ8 ? GO:0005515 ... A8ASG6 27933779
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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