Home Research COVID-19 Services Publications People Teaching Job Opening News Forum Lab Only
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 594392 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 956 957 958 959 960 961 962 963 964 965 966 967 968 969 970 971 972 973 974 975 976 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    193001 4z87:C (2.25) BS01 5GP 1.1.1.205 GO:0000166 ... Q756Z6 26558346
    193002 4z87:C (2.25) BS02 GDP 1.1.1.205 GO:0000166 ... Q756Z6 26558346 MOAD: Ki=210uM
    193003 4z87:C (2.25) BS03 GDP 1.1.1.205 GO:0000166 ... Q756Z6 26558346 MOAD: Ki=210uM
    193004 4z87:C (2.25) BS04 GDP 1.1.1.205 GO:0000166 ... Q756Z6 26558346 MOAD: Ki=210uM
    193005 4z87:D (2.25) BS01 5GP 1.1.1.205 GO:0000166 ... Q756Z6 26558346
    193006 4z87:D (2.25) BS02 GDP 1.1.1.205 GO:0000166 ... Q756Z6 26558346 MOAD: Ki=210uM
    193007 4z87:D (2.25) BS03 GDP 1.1.1.205 GO:0000166 ... Q756Z6 26558346 MOAD: Ki=210uM
    193008 4z87:D (2.25) BS04 GDP 1.1.1.205 GO:0000166 ... Q756Z6 26558346 MOAD: Ki=210uM
    193009 4z8b:A (1.951) BS01 CA ? GO:0005537 ... P08902 26226421
    193010 4z8b:A (1.951) BS02 MN ? GO:0005537 ... P08902 26226421
    193011 4z8c:10 (2.9) BS01 rna ? GO:0003735 ... P60493 25984972
    193012 4z8c:10 (2.9) BS02 rna ? GO:0003735 ... P60493 25984972
    193013 4z8c:10 (2.9) BS03 MG ? GO:0003735 ... P60493 25984972
    193014 4z8c:10 (2.9) BS04 MG ? GO:0003735 ... P60493 25984972
    193015 4z8c:11 (2.9) BS01 rna ? GO:0003735 ... P60494 25984972
    193016 4z8c:12 (2.9) BS01 rna ? GO:0003735 ... Q5SHP6 25984972
    193017 4z8c:13 (2.9) BS01 rna ? GO:0003735 ... Q5SHQ6 25984972
    193018 4z8c:13 (2.9) BS02 rna ? GO:0003735 ... Q5SHQ6 25984972
    193019 4z8c:14 (2.9) BS01 rna ? GO:0003735 ... Q5SJE1 25984972
    193020 4z8c:14 (2.9) BS02 ZN ? GO:0003735 ... Q5SJE1 25984972
    193021 4z8c:15 (2.9) BS01 rna ? GO:0003735 ... P80339 25984972
    193022 4z8c:15 (2.9) BS02 ZN ? GO:0003735 ... P80339 25984972
    193023 4z8c:15 (2.9) BS03 MG ? GO:0003735 ... P80339 25984972
    193024 4z8c:16 (2.9) BS01 rna ? GO:0000049 ... P35871 25984972
    193025 4z8c:16 (2.9) BS02 MG ? GO:0000049 ... P35871 25984972
    193026 4z8c:16 (2.9) BS03 ZN ? GO:0000049 ... P35871 25984972
    193027 4z8c:17 (2.9) BS01 rna ? GO:0003735 ... P80340 25984972
    193028 4z8c:17 (2.9) BS02 MG ? GO:0003735 ... P80340 25984972
    193029 4z8c:18 (2.9) BS01 rna ? GO:0003735 ... Q5SKU1 25984972
    193030 4z8c:18 (2.9) BS02 MG ? GO:0003735 ... Q5SKU1 25984972
    193031 4z8c:19 (2.9) BS01 rna ? GO:0003735 ... Q5SHR2 25984972
    193032 4z8c:19 (2.9) BS02 MG ? GO:0003735 ... Q5SHR2 25984972
    193033 4z8c:19 (2.9) BS03 ZN ? GO:0003735 ... Q5SHR2 25984972
    193034 4z8c:1D (2.9) BS01 rna ? GO:0002181 ... P60405 25984972
    193035 4z8c:1D (2.9) BS02 rna ? GO:0002181 ... P60405 25984972
    193036 4z8c:1D (2.9) BS03 MG ? GO:0002181 ... P60405 25984972
    193037 4z8c:1D (2.9) BS04 MG ? GO:0002181 ... P60405 25984972
    193038 4z8c:1D (2.9) BS05 MG ? GO:0002181 ... P60405 25984972
    193039 4z8c:1D (2.9) BS06 MG ? GO:0002181 ... P60405 25984972
    193040 4z8c:1D (2.9) BS07 MG ? GO:0002181 ... P60405 25984972
    193041 4z8c:1D (2.9) BS08 MG ? GO:0002181 ... P60405 25984972
    193042 4z8c:1D (2.9) BS09 MG ? GO:0002181 ... P60405 25984972
    193043 4z8c:1D (2.9) BS10 MG ? GO:0002181 ... P60405 25984972
    193044 4z8c:1D (2.9) BS11 MG ? GO:0002181 ... P60405 25984972
    193045 4z8c:1D (2.9) BS12 MG ? GO:0002181 ... P60405 25984972
    193046 4z8c:1E (2.9) BS01 rna ? GO:0003735 ... Q5SHN8 25984972
    193047 4z8c:1E (2.9) BS02 MG ? GO:0003735 ... Q5SHN8 25984972
    193048 4z8c:1F (2.9) BS01 rna ? GO:0003735 ... Q5SHN9 25984972
    193049 4z8c:1F (2.9) BS02 MG ? GO:0003735 ... Q5SHN9 25984972
    193050 4z8c:1F (2.9) BS03 MG ? GO:0003735 ... Q5SHN9 25984972
    193051 4z8c:1F (2.9) BS04 MG ? GO:0003735 ... Q5SHN9 25984972
    193052 4z8c:1F (2.9) BS05 MG ? GO:0003735 ... Q5SHN9 25984972
    193053 4z8c:1F (2.9) BS06 MG ? GO:0003735 ... Q5SHN9 25984972
    193054 4z8c:1F (2.9) BS07 MG ? GO:0003735 ... Q5SHN9 25984972
    193055 4z8c:1F (2.9) BS08 MG ? GO:0003735 ... Q5SHN9 25984972
    193056 4z8c:1G (2.9) BS01 rna ? GO:0000049 ... Q5SHQ0 25984972
    193057 4z8c:1G (2.9) BS02 rna ? GO:0000049 ... Q5SHQ0 25984972
    193058 4z8c:1G (2.9) BS03 rna ? GO:0000049 ... Q5SHQ0 25984972
    193059 4z8c:1G (2.9) BS04 MG ? GO:0000049 ... Q5SHQ0 25984972
    193060 4z8c:1G (2.9) BS05 MG ? GO:0000049 ... Q5SHQ0 25984972
    193061 4z8c:1H (2.9) BS01 rna N/A GO:0003735 ... N/A 25984972
    193062 4z8c:1H (2.9) BS02 MG N/A GO:0003735 ... N/A 25984972
    193063 4z8c:1I (2.9) BS01 rna ? GO:0003735 ... Q5SLQ1 25984972
    193064 4z8c:1N (2.9) BS01 rna ? GO:0003729 ... P60488 25984972
    193065 4z8c:1N (2.9) BS02 MG ? GO:0003729 ... P60488 25984972
    193066 4z8c:1O (2.9) BS01 rna ? GO:0003735 ... Q5SHP8 25984972
    193067 4z8c:1O (2.9) BS02 rna ? GO:0003735 ... Q5SHP8 25984972
    193068 4z8c:1O (2.9) BS03 MG ? GO:0003735 ... Q5SHP8 25984972
    193069 4z8c:1P (2.9) BS01 rna ? GO:0003735 ... Q5SHQ7 25984972
    193070 4z8c:1P (2.9) BS02 MG ? GO:0003735 ... Q5SHQ7 25984972
    193071 4z8c:1P (2.9) BS03 MG ? GO:0003735 ... Q5SHQ7 25984972
    193072 4z8c:1P (2.9) BS04 MG ? GO:0003735 ... Q5SHQ7 25984972
    193073 4z8c:1Q (2.9) BS01 rna ? GO:0000049 ... P60489 25984972
    193074 4z8c:1Q (2.9) BS02 rna ? GO:0000049 ... P60489 25984972
    193075 4z8c:1Q (2.9) BS03 MG ? GO:0000049 ... P60489 25984972
    193076 4z8c:1R (2.9) BS01 rna ? GO:0003735 ... Q9Z9H5 25984972
    193077 4z8c:1R (2.9) BS02 MG ? GO:0003735 ... Q9Z9H5 25984972
    193078 4z8c:1R (2.9) BS03 MG ? GO:0003735 ... Q9Z9H5 25984972
    193079 4z8c:1S (2.9) BS01 rna ? GO:0003735 ... Q5SHQ4 25984972
    193080 4z8c:1S (2.9) BS02 rna ? GO:0003735 ... Q5SHQ4 25984972
    193081 4z8c:1T (2.9) BS01 rna ? GO:0003735 ... P60490 25984972
    193082 4z8c:1T (2.9) BS02 rna ? GO:0003735 ... P60490 25984972
    193083 4z8c:1U (2.9) BS01 rna ? GO:0000027 ... P60491 25984972
    193084 4z8c:1U (2.9) BS02 MG ? GO:0000027 ... P60491 25984972
    193085 4z8c:1U (2.9) BS03 MG ? GO:0000027 ... P60491 25984972
    193086 4z8c:1U (2.9) BS04 MG ? GO:0000027 ... P60491 25984972
    193087 4z8c:1U (2.9) BS05 MG ? GO:0000027 ... P60491 25984972
    193088 4z8c:1V (2.9) BS01 rna ? GO:0003723 ... P60492 25984972
    193089 4z8c:1V (2.9) BS02 MG ? GO:0003723 ... P60492 25984972
    193090 4z8c:1V (2.9) BS03 MG ? GO:0003723 ... P60492 25984972
    193091 4z8c:1V (2.9) BS04 MG ? GO:0003723 ... P60492 25984972
    193092 4z8c:1V (2.9) BS05 MG ? GO:0003723 ... P60492 25984972
    193093 4z8c:1V (2.9) BS06 MG ? GO:0003723 ... P60492 25984972
    193094 4z8c:1W (2.9) BS01 rna ? GO:0003735 ... Q5SHP3 25984972
    193095 4z8c:1W (2.9) BS02 MG ? GO:0003735 ... Q5SHP3 25984972
    193096 4z8c:1W (2.9) BS03 MG ? GO:0003735 ... Q5SHP3 25984972
    193097 4z8c:1X (2.9) BS01 rna ? GO:0000027 ... Q5SHP0 25984972
    193098 4z8c:1X (2.9) BS02 MG ? GO:0000027 ... Q5SHP0 25984972
    193099 4z8c:1Y (2.9) BS01 rna ? GO:0003723 ... Q5SHP9 25984972
    193100 4z8c:1Y (2.9) BS02 ZN ? GO:0003723 ... Q5SHP9 25984972
    193101 4z8c:1Z (2.9) BS01 rna ? GO:0003723 ... Q5SHZ1 25984972
    193102 4z8c:1Z (2.9) BS02 rna ? GO:0003723 ... Q5SHZ1 25984972
    193103 4z8c:1b (2.9) BS01 rna ? GO:0003735 ... P80371 25984972
    193104 4z8c:1b (2.9) BS02 MG ? GO:0003735 ... P80371 25984972
    193105 4z8c:1c (2.9) BS01 rna ? GO:0003676 ... P80372 25984972
    193106 4z8c:1d (2.9) BS01 rna ? GO:0003723 ... P80373 25984972
    193107 4z8c:1d (2.9) BS02 SF4 ? GO:0003723 ... P80373 25984972
    193108 4z8c:1d (2.9) BS03 MG ? GO:0003723 ... P80373 25984972
    193109 4z8c:1e (2.9) BS01 rna ? GO:0003723 ... Q5SHQ5 25984972
    193110 4z8c:1e (2.9) BS02 MG ? GO:0003723 ... Q5SHQ5 25984972
    193111 4z8c:1e (2.9) BS03 MG ? GO:0003723 ... Q5SHQ5 25984972
    193112 4z8c:1f (2.9) BS01 rna ? GO:0003735 ... Q5SLP8 25984972
    193113 4z8c:1g (2.9) BS01 rna ? GO:0000028 ... P17291 25984972
    193114 4z8c:1h (2.9) BS01 rna N/A GO:0003735 ... N/A 25984972
    193115 4z8c:1i (2.9) BS01 rna ? GO:0000049 ... P80374 25984972
    193116 4z8c:1j (2.9) BS01 rna ? GO:0000049 ... Q5SHN7 25984972
    193117 4z8c:1k (2.9) BS01 rna ? GO:0003735 ... P80376 25984972
    193118 4z8c:1k (2.9) BS02 MG ? GO:0003735 ... P80376 25984972
    193119 4z8c:1l (2.9) BS01 rna ? GO:0000049 ... Q5SHN3 25984972
    193120 4z8c:1l (2.9) BS02 MG ? GO:0000049 ... Q5SHN3 25984972
    193121 4z8c:1m (2.9) BS01 rna ? GO:0000049 ... P80377 25984972
    193122 4z8c:1m (2.9) BS02 rna ? GO:0000049 ... P80377 25984972
    193123 4z8c:1m (2.9) BS03 rna ? GO:0000049 ... P80377 25984972
    193124 4z8c:1m (2.9) BS04 MG ? GO:0000049 ... P80377 25984972
    193125 4z8c:1n (2.9) BS01 rna N/A GO:0003735 ... N/A 25984972
    193126 4z8c:1n (2.9) BS02 ZN N/A GO:0003735 ... N/A 25984972
    193127 4z8c:1o (2.9) BS01 rna ? GO:0003735 ... Q5SJ76 25984972
    193128 4z8c:1o (2.9) BS02 rna ? GO:0003735 ... Q5SJ76 25984972
    193129 4z8c:1p (2.9) BS01 rna ? GO:0003735 ... Q5SJH3 25984972
    193130 4z8c:1q (2.9) BS01 rna N/A GO:0003735 ... N/A 25984972
    193131 4z8c:1r (2.9) BS01 rna ? GO:0003735 ... Q5SLQ0 25984972
    193132 4z8c:1s (2.9) BS01 rna ? GO:0000028 ... Q5SHP2 25984972
    193133 4z8c:1s (2.9) BS02 MG ? GO:0000028 ... Q5SHP2 25984972
    193134 4z8c:1t (2.9) BS01 rna ? GO:0003723 ... P80380 25984972
    193135 4z8c:20 (2.9) BS01 rna ? GO:0003735 ... P60493 25984972
    193136 4z8c:20 (2.9) BS02 rna ? GO:0003735 ... P60493 25984972
    193137 4z8c:21 (2.9) BS01 rna ? GO:0003735 ... P60494 25984972
    193138 4z8c:22 (2.9) BS01 rna ? GO:0003735 ... Q5SHP6 25984972
    193139 4z8c:23 (2.9) BS01 rna ? GO:0003735 ... Q5SHQ6 25984972
    193140 4z8c:23 (2.9) BS02 rna ? GO:0003735 ... Q5SHQ6 25984972
    193141 4z8c:24 (2.9) BS01 rna ? GO:0003735 ... Q5SJE1 25984972
    193142 4z8c:24 (2.9) BS02 ZN ? GO:0003735 ... Q5SJE1 25984972
    193143 4z8c:25 (2.9) BS01 rna ? GO:0003735 ... P80339 25984972
    193144 4z8c:25 (2.9) BS02 ZN ? GO:0003735 ... P80339 25984972
    193145 4z8c:26 (2.9) BS01 rna ? GO:0000049 ... P35871 25984972
    193146 4z8c:26 (2.9) BS02 ZN ? GO:0000049 ... P35871 25984972
    193147 4z8c:27 (2.9) BS01 rna ? GO:0003735 ... P80340 25984972
    193148 4z8c:28 (2.9) BS01 rna ? GO:0003735 ... Q5SKU1 25984972
    193149 4z8c:29 (2.9) BS01 rna ? GO:0003735 ... Q5SHR2 25984972
    193150 4z8c:29 (2.9) BS02 ZN ? GO:0003735 ... Q5SHR2 25984972
    193151 4z8c:2D (2.9) BS01 rna ? GO:0002181 ... P60405 25984972
    193152 4z8c:2D (2.9) BS02 rna ? GO:0002181 ... P60405 25984972
    193153 4z8c:2D (2.9) BS03 MG ? GO:0002181 ... P60405 25984972
    193154 4z8c:2D (2.9) BS04 MG ? GO:0002181 ... P60405 25984972
    193155 4z8c:2E (2.9) BS01 rna ? GO:0003735 ... Q5SHN8 25984972
    193156 4z8c:2E (2.9) BS02 MG ? GO:0003735 ... Q5SHN8 25984972
    193157 4z8c:2F (2.9) BS01 rna ? GO:0003735 ... Q5SHN9 25984972
    193158 4z8c:2F (2.9) BS02 MG ? GO:0003735 ... Q5SHN9 25984972
    193159 4z8c:2F (2.9) BS03 MG ? GO:0003735 ... Q5SHN9 25984972
    193160 4z8c:2F (2.9) BS04 MG ? GO:0003735 ... Q5SHN9 25984972
    193161 4z8c:2F (2.9) BS05 MG ? GO:0003735 ... Q5SHN9 25984972
    193162 4z8c:2F (2.9) BS06 MG ? GO:0003735 ... Q5SHN9 25984972
    193163 4z8c:2G (2.9) BS01 rna ? GO:0000049 ... Q5SHQ0 25984972
    193164 4z8c:2G (2.9) BS02 rna ? GO:0000049 ... Q5SHQ0 25984972
    193165 4z8c:2G (2.9) BS03 rna ? GO:0000049 ... Q5SHQ0 25984972
    193166 4z8c:2G (2.9) BS04 MG ? GO:0000049 ... Q5SHQ0 25984972
    193167 4z8c:2H (2.9) BS01 rna N/A GO:0003735 ... N/A 25984972
    193168 4z8c:2I (2.9) BS01 rna ? GO:0003735 ... Q5SLQ1 25984972
    193169 4z8c:2N (2.9) BS01 rna ? GO:0003729 ... P60488 25984972
    193170 4z8c:2O (2.9) BS01 rna ? GO:0003735 ... Q5SHP8 25984972
    193171 4z8c:2O (2.9) BS02 rna ? GO:0003735 ... Q5SHP8 25984972
    193172 4z8c:2P (2.9) BS01 rna ? GO:0003735 ... Q5SHQ7 25984972
    193173 4z8c:2P (2.9) BS02 MG ? GO:0003735 ... Q5SHQ7 25984972
    193174 4z8c:2Q (2.9) BS01 rna ? GO:0000049 ... P60489 25984972
    193175 4z8c:2Q (2.9) BS02 rna ? GO:0000049 ... P60489 25984972
    193176 4z8c:2Q (2.9) BS03 MG ? GO:0000049 ... P60489 25984972
    193177 4z8c:2R (2.9) BS01 rna ? GO:0003735 ... Q9Z9H5 25984972
    193178 4z8c:2S (2.9) BS01 rna ? GO:0003735 ... Q5SHQ4 25984972
    193179 4z8c:2S (2.9) BS02 rna ? GO:0003735 ... Q5SHQ4 25984972
    193180 4z8c:2T (2.9) BS01 rna ? GO:0003735 ... P60490 25984972
    193181 4z8c:2T (2.9) BS02 rna ? GO:0003735 ... P60490 25984972
    193182 4z8c:2U (2.9) BS01 rna ? GO:0000027 ... P60491 25984972
    193183 4z8c:2U (2.9) BS02 MG ? GO:0000027 ... P60491 25984972
    193184 4z8c:2V (2.9) BS01 rna ? GO:0003723 ... P60492 25984972
    193185 4z8c:2V (2.9) BS02 MG ? GO:0003723 ... P60492 25984972
    193186 4z8c:2W (2.9) BS01 rna ? GO:0003735 ... Q5SHP3 25984972
    193187 4z8c:2W (2.9) BS02 MG ? GO:0003735 ... Q5SHP3 25984972
    193188 4z8c:2X (2.9) BS01 rna ? GO:0000027 ... Q5SHP0 25984972
    193189 4z8c:2Y (2.9) BS01 rna ? GO:0003723 ... Q5SHP9 25984972
    193190 4z8c:2Y (2.9) BS02 ZN ? GO:0003723 ... Q5SHP9 25984972
    193191 4z8c:2Z (2.9) BS01 rna ? GO:0003723 ... Q5SHZ1 25984972
    193192 4z8c:2Z (2.9) BS02 rna ? GO:0003723 ... Q5SHZ1 25984972
    193193 4z8c:2Z (2.9) BS03 MG ? GO:0003723 ... Q5SHZ1 25984972
    193194 4z8c:2b (2.9) BS01 rna ? GO:0003735 ... P80371 25984972
    193195 4z8c:2c (2.9) BS01 rna ? GO:0003676 ... P80372 25984972
    193196 4z8c:2d (2.9) BS01 rna ? GO:0003723 ... P80373 25984972
    193197 4z8c:2d (2.9) BS02 SF4 ? GO:0003723 ... P80373 25984972
    193198 4z8c:2e (2.9) BS01 rna ? GO:0003723 ... Q5SHQ5 25984972
    193199 4z8c:2f (2.9) BS01 rna ? GO:0003735 ... Q5SLP8 25984972
    193200 4z8c:2f (2.9) BS02 MG ? GO:0003735 ... Q5SLP8 25984972
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417