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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 594392 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    182401 4wgi:A (1.85) BS03 3M6 ? GO:0008643 ... P0AEY0
    Q07820    		 25516789 PDBbind: -logKd/Ki=5.35, IC50=4.5uM
    182402 4wgy:A (1.48) BS01 HEC ? GO:0005506 ... P00138 N/A
    182403 4wgz:A (1.11) BS01 HEC ? GO:0005506 ... P00138 N/A
    182404 4wha:A (1.7) BS01 FE 1.13.11.12 GO:0005506 ... P08170 24884374
    182405 4whf:A (2.27) BS01 3MX ? GO:0003677 ... P22736 26235054
    182406 4whg:A (2.18) BS01 3NB ? GO:0003677 ... P22736 26235054
    182407 4wi1:A (1.65) BS01 3O6 6.1.1.15 GO:0000166 ... Q8I5R7 27798837 MOAD: ic50=5uM
    PDBbind: -logKd/Ki=5.30, IC50=5uM
    182408 4wi1:A (1.65) BS02 MG 6.1.1.15 GO:0000166 ... Q8I5R7 27798837
    182409 4wi1:B (1.65) BS01 3O6 6.1.1.15 GO:0000166 ... Q8I5R7 27798837 MOAD: ic50=5uM
    182410 4wie:A (2.18) BS01 MN 4.1.1.32 GO:0004611 ... A5TYT6 N/A
    182411 4wif:A (1.8) BS01 ZN 3.5.4.5 GO:0003824 ... P9WPH3 N/A
    182412 4wif:B (1.8) BS01 ZN 3.5.4.5 GO:0003824 ... P9WPH3 N/A
    182413 4wig:A (1.758) BS01 ZN 3.5.4.5 GO:0003824 ... P9WPH3 N/A
    182414 4wig:B (1.758) BS01 ZN 3.5.4.5 GO:0003824 ... P9WPH3 N/A
    182415 4wih:A (1.139) BS01 peptide 2.7.11.11 GO:0000287 ... P25321 26249705
    182416 4wio:A (3.15) BS01 GLN 6.3.5.2 GO:0000287 ... Q8IJR9 26592566
    182417 4wis:A (3.3) BS01 CA ? GO:0005254 ... C7Z7K1 25383531
    182418 4wis:A (3.3) BS02 CA ? GO:0005254 ... C7Z7K1 25383531
    182419 4wis:B (3.3) BS01 CA ? GO:0005254 ... C7Z7K1 25383531
    182420 4wis:B (3.3) BS02 CA ? GO:0005254 ... C7Z7K1 25383531
    182421 4wit:A (3.4) BS01 CA ? GO:0005254 ... C7Z7K1 25383531
    182422 4wit:A (3.4) BS02 CA ? GO:0005254 ... C7Z7K1 25383531
    182423 4wit:B (3.4) BS01 CA ? GO:0005254 ... C7Z7K1 25383531
    182424 4wit:B (3.4) BS02 CA ? GO:0005254 ... C7Z7K1 25383531
    182425 4wiu:A (2.02) BS01 MN 4.1.1.32 GO:0004611 ... A5TYT6 N/A
    182426 4wiu:A (2.02) BS02 OXL 4.1.1.32 GO:0004611 ... A5TYT6 N/A
    182427 4wiz:AA (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182428 4wiz:AA (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182429 4wiz:AB (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182430 4wiz:AB (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182431 4wiz:AC (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182432 4wiz:AC (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182433 4wiz:AD (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182434 4wiz:AD (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182435 4wiz:AE (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182436 4wiz:AE (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182437 4wiz:AF (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182438 4wiz:AF (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182439 4wiz:AG (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182440 4wiz:AG (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182441 4wiz:AH (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182442 4wiz:AH (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182443 4wiz:AI (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182444 4wiz:AI (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182445 4wiz:AJ (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182446 4wiz:AJ (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182447 4wiz:AK (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182448 4wiz:AK (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182449 4wiz:AL (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182450 4wiz:AL (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182451 4wiz:AM (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182452 4wiz:AM (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182453 4wiz:AN (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182454 4wiz:AN (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182455 4wiz:AO (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182456 4wiz:AO (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182457 4wiz:AP (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182458 4wiz:AP (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182459 4wiz:AQ (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182460 4wiz:AQ (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182461 4wiz:AR (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182462 4wiz:AR (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182463 4wiz:AS (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182464 4wiz:AS (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182465 4wiz:AT (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182466 4wiz:AT (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182467 4wiz:AU (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182468 4wiz:AU (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182469 4wiz:AV (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182470 4wiz:AV (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182471 4wiz:AW (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182472 4wiz:AW (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182473 4wiz:AX (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182474 4wiz:AX (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182475 4wiz:AY (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182476 4wiz:AY (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182477 4wiz:AZ (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182478 4wiz:AZ (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182479 4wiz:Aa (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182480 4wiz:Aa (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182481 4wiz:Ab (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182482 4wiz:Ab (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182483 4wiz:Ac (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182484 4wiz:Ac (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182485 4wiz:Ad (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182486 4wiz:Ad (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182487 4wiz:BA (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182488 4wiz:BA (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182489 4wiz:BB (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182490 4wiz:BB (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182491 4wiz:BC (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182492 4wiz:BC (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182493 4wiz:BD (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182494 4wiz:BD (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182495 4wiz:BE (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182496 4wiz:BE (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182497 4wiz:BF (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182498 4wiz:BF (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182499 4wiz:BG (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182500 4wiz:BG (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182501 4wiz:BH (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182502 4wiz:BH (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182503 4wiz:BI (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182504 4wiz:BI (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182505 4wiz:BJ (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182506 4wiz:BJ (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182507 4wiz:BK (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182508 4wiz:BK (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182509 4wiz:BL (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182510 4wiz:BL (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182511 4wiz:BM (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182512 4wiz:BM (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182513 4wiz:BN (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182514 4wiz:BN (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182515 4wiz:BO (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182516 4wiz:BO (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182517 4wiz:BP (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182518 4wiz:BP (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182519 4wiz:BQ (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182520 4wiz:BQ (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182521 4wiz:BR (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182522 4wiz:BR (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182523 4wiz:BS (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182524 4wiz:BS (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182525 4wiz:BT (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182526 4wiz:BT (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182527 4wiz:BU (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182528 4wiz:BU (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182529 4wiz:BV (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182530 4wiz:BV (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182531 4wiz:BW (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182532 4wiz:BW (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182533 4wiz:BX (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182534 4wiz:BX (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182535 4wiz:BY (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182536 4wiz:BY (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182537 4wiz:BZ (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182538 4wiz:BZ (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182539 4wiz:Ba (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182540 4wiz:Ba (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182541 4wiz:Bb (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182542 4wiz:Bb (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182543 4wiz:Bc (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182544 4wiz:Bc (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182545 4wiz:Bd (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182546 4wiz:Bd (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182547 4wiz:CA (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182548 4wiz:CA (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182549 4wiz:CB (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182550 4wiz:CB (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182551 4wiz:CC (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182552 4wiz:CC (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182553 4wiz:CD (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182554 4wiz:CD (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182555 4wiz:CE (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182556 4wiz:CE (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182557 4wiz:CF (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182558 4wiz:CF (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182559 4wiz:CG (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182560 4wiz:CG (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182561 4wiz:CH (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182562 4wiz:CH (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182563 4wiz:CI (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182564 4wiz:CI (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182565 4wiz:CJ (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182566 4wiz:CJ (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182567 4wiz:CK (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182568 4wiz:CK (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182569 4wiz:CL (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182570 4wiz:CL (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182571 4wiz:CM (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182572 4wiz:CM (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182573 4wiz:CN (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182574 4wiz:CN (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182575 4wiz:CO (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182576 4wiz:CO (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182577 4wiz:CP (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182578 4wiz:CP (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182579 4wiz:CQ (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182580 4wiz:CQ (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182581 4wiz:CR (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182582 4wiz:CR (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182583 4wiz:CS (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182584 4wiz:CS (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182585 4wiz:CT (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182586 4wiz:CT (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182587 4wiz:CU (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182588 4wiz:CU (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182589 4wiz:CV (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182590 4wiz:CV (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182591 4wiz:CW (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182592 4wiz:CW (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182593 4wiz:CX (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182594 4wiz:CX (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182595 4wiz:CY (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182596 4wiz:CY (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182597 4wiz:CZ (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182598 4wiz:CZ (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    182599 4wiz:Ca (3.6) BS01 CA ? GO:0019028 ... Q8JNX5 26491970
    182600 4wiz:Ca (3.6) BS02 CA ? GO:0019028 ... Q8JNX5 26491970
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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