Home Research COVID-19 Services Publications People Teaching Job Opening News Forum Lab Only
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 594392 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

    • Sort results by
    << < 842 843 844 845 846 847 848 849 850 851 852 853 854 855 856 857 858 859 860 861 862 > >>
    Go to page

    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    170201 4v73:BU (15.0) BS01 rna ? GO:0000027 ... P60624 24186064
    170202 4v73:BV (15.0) BS01 rna ? GO:0000027 ... P68919 24186064
    170203 4v73:BW (15.0) BS01 rna ? GO:0000027 ... P0A7L8 24186064
    170204 4v73:BW (15.0) BS02 rna ? GO:0000027 ... P0A7L8 24186064
    170205 4v73:BX (15.0) BS01 rna ? GO:0000027 ... P0A7M2 24186064
    170206 4v73:BY (15.0) BS01 rna ? GO:0000027 ... P0A7M6 24186064
    170207 4v73:BZ (15.0) BS01 rna ? GO:0000027 ... P0AG51 24186064
    170208 4v73:BZ (15.0) BS02 rna ? GO:0000027 ... P0AG51 24186064
    170209 4v74:AB (17.0) BS01 rna ? GO:0000028 ... P0A7V0 24186064
    170210 4v74:AD (17.0) BS01 rna ? GO:0000028 ... P0A7V8 24186064
    170211 4v74:AE (17.0) BS01 rna ? GO:0000028 ... P0A7W1 24186064
    170212 4v74:AF (17.0) BS01 rna ? GO:0003735 ... P02358 24186064
    170213 4v74:AG (17.0) BS01 rna ? GO:0003723 ... P02359 24186064
    170214 4v74:AH (17.0) BS01 rna ? GO:0000028 ... P0A7W7 24186064
    170215 4v74:AI (17.0) BS01 rna ? GO:0000049 ... P0A7X3 24186064
    170216 4v74:AJ (17.0) BS01 rna ? GO:0000049 ... P0A7R5 24186064
    170217 4v74:AK (17.0) BS01 rna ? GO:0002181 ... P0A7R9 24186064
    170218 4v74:AL (17.0) BS01 rna ? GO:0000049 ... P0A7S3 24186064
    170219 4v74:AM (17.0) BS01 rna ? GO:0000049 ... P0A7S9 24186064
    170220 4v74:AN (17.0) BS01 rna ? GO:0000028 ... P0AG59 24186064
    170221 4v74:AO (17.0) BS01 rna ? GO:0000028 ... P0ADZ4 24186064
    170222 4v74:AO (17.0) BS02 rna ? GO:0000028 ... P0ADZ4 24186064
    170223 4v74:AP (17.0) BS01 rna ? GO:0000028 ... P0A7T3 24186064
    170224 4v74:AQ (17.0) BS01 rna ? GO:0000028 ... P0AG63 24186064
    170225 4v74:AR (17.0) BS01 rna ? GO:0003735 ... P0A7T7 24186064
    170226 4v74:AS (17.0) BS01 rna ? GO:0003723 ... P0A7U3 24186064
    170227 4v74:AT (17.0) BS01 rna ? GO:0000028 ... P0A7U7 24186064
    170228 4v74:AU (17.0) BS01 rna ? GO:0003735 ... P68679 24186064
    170229 4v74:B0 (17.0) BS01 rna ? GO:0000027 ... P0A7N4 24186064
    170230 4v74:B1 (17.0) BS01 rna ? GO:0000027 ... P0A7N9 24186064
    170231 4v74:B2 (17.0) BS01 rna ? GO:0002181 ... P0A7P5 24186064
    170232 4v74:B3 (17.0) BS01 rna ? GO:0002181 ... P0A7Q1 24186064
    170233 4v74:B4 (17.0) BS01 rna ? GO:0002181 ... P0A7Q6 24186064
    170234 4v74:B5 (17.0) BS01 rna ? GO:0000027 ... P0A7L0 24186064
    170235 4v74:B5 (17.0) BS02 rna ? GO:0000027 ... P0A7L0 24186064
    170236 4v74:BC (17.0) BS01 rna ? GO:0000027 ... P60422 24186064
    170237 4v74:BC (17.0) BS02 rna ? GO:0000027 ... P60422 24186064
    170238 4v74:BD (17.0) BS01 rna ? GO:0000027 ... P60438 24186064
    170239 4v74:BE (17.0) BS01 rna ? GO:0001070 ... P60723 24186064
    170240 4v74:BF (17.0) BS01 rna ? GO:0000027 ... P62399 24186064
    170241 4v74:BF (17.0) BS02 rna ? GO:0000027 ... P62399 24186064
    170242 4v74:BG (17.0) BS01 rna ? GO:0000027 ... P0AG55 24186064
    170243 4v74:BH (17.0) BS01 rna ? GO:0002181 ... P0A7R1 24186064
    170244 4v74:BI (17.0) BS01 rna ? GO:0000027 ... P0A7J7 24186064
    170245 4v74:BJ (17.0) BS01 rna ? GO:0002181 ... P0AA10 24186064
    170246 4v74:BK (17.0) BS01 rna ? GO:0002181 ... P0ADY3 24186064
    170247 4v74:BK (17.0) BS02 rna ? GO:0002181 ... P0ADY3 24186064
    170248 4v74:BL (17.0) BS01 rna ? GO:0002181 ... P02413 24186064
    170249 4v74:BM (17.0) BS01 rna ? GO:0000027 ... P0ADY7 24186064
    170250 4v74:BM (17.0) BS02 rna ? GO:0000027 ... P0ADY7 24186064
    170251 4v74:BM (17.0) BS03 rna ? GO:0000027 ... P0ADY7 24186064
    170252 4v74:BN (17.0) BS01 rna ? GO:0000027 ... P0AG44 24186064
    170253 4v74:BO (17.0) BS01 rna ? GO:0002181 ... P0C018 24186064
    170254 4v74:BO (17.0) BS02 rna ? GO:0002181 ... P0C018 24186064
    170255 4v74:BP (17.0) BS01 rna ? GO:0000027 ... P0A7K6 24186064
    170256 4v74:BP (17.0) BS02 rna ? GO:0000027 ... P0A7K6 24186064
    170257 4v74:BQ (17.0) BS01 rna ? GO:0000027 ... P0A7L3 24186064
    170258 4v74:BR (17.0) BS01 rna ? GO:0002181 ... P0AG48 24186064
    170259 4v74:BS (17.0) BS01 rna ? GO:0002181 ... P61175 24186064
    170260 4v74:BT (17.0) BS01 rna ? GO:0000027 ... P0ADZ0 24186064
    170261 4v74:BU (17.0) BS01 rna ? GO:0000027 ... P60624 24186064
    170262 4v74:BV (17.0) BS01 rna ? GO:0000027 ... P68919 24186064
    170263 4v74:BW (17.0) BS01 rna ? GO:0000027 ... P0A7L8 24186064
    170264 4v74:BW (17.0) BS02 rna ? GO:0000027 ... P0A7L8 24186064
    170265 4v74:BX (17.0) BS01 rna ? GO:0000027 ... P0A7M2 24186064
    170266 4v74:BY (17.0) BS01 rna ? GO:0000027 ... P0A7M6 24186064
    170267 4v74:BZ (17.0) BS01 rna ? GO:0000027 ... P0AG51 24186064
    170268 4v74:BZ (17.0) BS02 rna ? GO:0000027 ... P0AG51 24186064
    170269 4v75:AB (12.0) BS01 rna ? GO:0000028 ... P0A7V0 24186064
    170270 4v75:AD (12.0) BS01 rna ? GO:0000028 ... P0A7V8 24186064
    170271 4v75:AE (12.0) BS01 rna ? GO:0000028 ... P0A7W1 24186064
    170272 4v75:AE (12.0) BS02 rna ? GO:0000028 ... P0A7W1 24186064
    170273 4v75:AF (12.0) BS01 rna ? GO:0003735 ... P02358 24186064
    170274 4v75:AG (12.0) BS01 rna ? GO:0003723 ... P02359 24186064
    170275 4v75:AG (12.0) BS02 rna ? GO:0003723 ... P02359 24186064
    170276 4v75:AG (12.0) BS03 rna ? GO:0003723 ... P02359 24186064
    170277 4v75:AH (12.0) BS01 rna ? GO:0000028 ... P0A7W7 24186064
    170278 4v75:AI (12.0) BS01 rna ? GO:0000049 ... P0A7X3 24186064
    170279 4v75:AJ (12.0) BS01 rna ? GO:0000049 ... P0A7R5 24186064
    170280 4v75:AK (12.0) BS01 rna ? GO:0002181 ... P0A7R9 24186064
    170281 4v75:AL (12.0) BS01 rna ? GO:0000049 ... P0A7S3 24186064
    170282 4v75:AM (12.0) BS01 rna ? GO:0000049 ... P0A7S9 24186064
    170283 4v75:AN (12.0) BS01 rna ? GO:0000028 ... P0AG59 24186064
    170284 4v75:AO (12.0) BS01 rna ? GO:0000028 ... P0ADZ4 24186064
    170285 4v75:AO (12.0) BS02 rna ? GO:0000028 ... P0ADZ4 24186064
    170286 4v75:AP (12.0) BS01 rna ? GO:0000028 ... P0A7T3 24186064
    170287 4v75:AQ (12.0) BS01 rna ? GO:0000028 ... P0AG63 24186064
    170288 4v75:AR (12.0) BS01 rna ? GO:0003735 ... P0A7T7 24186064
    170289 4v75:AS (12.0) BS01 rna ? GO:0003723 ... P0A7U3 24186064
    170290 4v75:AT (12.0) BS01 rna ? GO:0000028 ... P0A7U7 24186064
    170291 4v75:AU (12.0) BS01 rna ? GO:0003735 ... P68679 24186064
    170292 4v75:AU (12.0) BS02 rna ? GO:0003735 ... P68679 24186064
    170293 4v75:B0 (12.0) BS01 rna ? GO:0000027 ... P0A7N4 24186064
    170294 4v75:B1 (12.0) BS01 rna ? GO:0000027 ... P0A7N9 24186064
    170295 4v75:B1 (12.0) BS02 rna ? GO:0000027 ... P0A7N9 24186064
    170296 4v75:B2 (12.0) BS01 rna ? GO:0002181 ... P0A7P5 24186064
    170297 4v75:B3 (12.0) BS01 rna ? GO:0002181 ... P0A7Q1 24186064
    170298 4v75:B4 (12.0) BS01 rna ? GO:0002181 ... P0A7Q6 24186064
    170299 4v75:B5 (12.0) BS01 rna ? GO:0000027 ... P0A7L0 24186064
    170300 4v75:B5 (12.0) BS02 rna ? GO:0000027 ... P0A7L0 24186064
    170301 4v75:BC (12.0) BS01 rna ? GO:0000027 ... P60422 24186064
    170302 4v75:BD (12.0) BS01 rna ? GO:0000027 ... P60438 24186064
    170303 4v75:BE (12.0) BS01 rna ? GO:0001070 ... P60723 24186064
    170304 4v75:BF (12.0) BS01 rna ? GO:0000027 ... P62399 24186064
    170305 4v75:BF (12.0) BS02 rna ? GO:0000027 ... P62399 24186064
    170306 4v75:BF (12.0) BS03 rna ? GO:0000027 ... P62399 24186064
    170307 4v75:BG (12.0) BS01 rna ? GO:0000027 ... P0AG55 24186064
    170308 4v75:BH (12.0) BS01 rna ? GO:0002181 ... P0A7R1 24186064
    170309 4v75:BI (12.0) BS01 rna ? GO:0000027 ... P0A7J7 24186064
    170310 4v75:BJ (12.0) BS01 rna ? GO:0002181 ... P0AA10 24186064
    170311 4v75:BK (12.0) BS01 rna ? GO:0002181 ... P0ADY3 24186064
    170312 4v75:BK (12.0) BS02 rna ? GO:0002181 ... P0ADY3 24186064
    170313 4v75:BL (12.0) BS01 rna ? GO:0002181 ... P02413 24186064
    170314 4v75:BM (12.0) BS01 rna ? GO:0000027 ... P0ADY7 24186064
    170315 4v75:BM (12.0) BS02 rna ? GO:0000027 ... P0ADY7 24186064
    170316 4v75:BM (12.0) BS03 rna ? GO:0000027 ... P0ADY7 24186064
    170317 4v75:BN (12.0) BS01 rna ? GO:0000027 ... P0AG44 24186064
    170318 4v75:BO (12.0) BS01 rna ? GO:0002181 ... P0C018 24186064
    170319 4v75:BO (12.0) BS02 rna ? GO:0002181 ... P0C018 24186064
    170320 4v75:BP (12.0) BS01 rna ? GO:0000027 ... P0A7K6 24186064
    170321 4v75:BP (12.0) BS02 rna ? GO:0000027 ... P0A7K6 24186064
    170322 4v75:BQ (12.0) BS01 rna ? GO:0000027 ... P0A7L3 24186064
    170323 4v75:BR (12.0) BS01 rna ? GO:0002181 ... P0AG48 24186064
    170324 4v75:BS (12.0) BS01 rna ? GO:0002181 ... P61175 24186064
    170325 4v75:BT (12.0) BS01 rna ? GO:0000027 ... P0ADZ0 24186064
    170326 4v75:BU (12.0) BS01 rna ? GO:0000027 ... P60624 24186064
    170327 4v75:BV (12.0) BS01 rna ? GO:0000027 ... P68919 24186064
    170328 4v75:BV (12.0) BS02 rna ? GO:0000027 ... P68919 24186064
    170329 4v75:BW (12.0) BS01 rna ? GO:0000027 ... P0A7L8 24186064
    170330 4v75:BW (12.0) BS02 rna ? GO:0000027 ... P0A7L8 24186064
    170331 4v75:BX (12.0) BS01 rna ? GO:0000027 ... P0A7M2 24186064
    170332 4v75:BY (12.0) BS01 rna ? GO:0000027 ... P0A7M6 24186064
    170333 4v75:BZ (12.0) BS01 rna ? GO:0000027 ... P0AG51 24186064
    170334 4v75:BZ (12.0) BS02 rna ? GO:0000027 ... P0AG51 24186064
    170335 4v76:AB (17.0) BS01 rna ? GO:0000028 ... P0A7V0 24186064
    170336 4v76:AD (17.0) BS01 rna ? GO:0000028 ... P0A7V8 24186064
    170337 4v76:AE (17.0) BS01 rna ? GO:0000028 ... P0A7W1 24186064
    170338 4v76:AF (17.0) BS01 rna ? GO:0003735 ... P02358 24186064
    170339 4v76:AG (17.0) BS01 rna ? GO:0003723 ... P02359 24186064
    170340 4v76:AG (17.0) BS02 rna ? GO:0003723 ... P02359 24186064
    170341 4v76:AH (17.0) BS01 rna ? GO:0000028 ... P0A7W7 24186064
    170342 4v76:AI (17.0) BS01 rna ? GO:0000049 ... P0A7X3 24186064
    170343 4v76:AJ (17.0) BS01 rna ? GO:0000049 ... P0A7R5 24186064
    170344 4v76:AK (17.0) BS01 rna ? GO:0002181 ... P0A7R9 24186064
    170345 4v76:AK (17.0) BS02 rna ? GO:0002181 ... P0A7R9 24186064
    170346 4v76:AL (17.0) BS01 rna ? GO:0000049 ... P0A7S3 24186064
    170347 4v76:AM (17.0) BS01 rna ? GO:0000049 ... P0A7S9 24186064
    170348 4v76:AM (17.0) BS02 rna ? GO:0000049 ... P0A7S9 24186064
    170349 4v76:AN (17.0) BS01 rna ? GO:0000028 ... P0AG59 24186064
    170350 4v76:AO (17.0) BS01 rna ? GO:0000028 ... P0ADZ4 24186064
    170351 4v76:AO (17.0) BS02 rna ? GO:0000028 ... P0ADZ4 24186064
    170352 4v76:AP (17.0) BS01 rna ? GO:0000028 ... P0A7T3 24186064
    170353 4v76:AQ (17.0) BS01 rna ? GO:0000028 ... P0AG63 24186064
    170354 4v76:AR (17.0) BS01 rna ? GO:0003735 ... P0A7T7 24186064
    170355 4v76:AS (17.0) BS01 rna ? GO:0003723 ... P0A7U3 24186064
    170356 4v76:AT (17.0) BS01 rna ? GO:0000028 ... P0A7U7 24186064
    170357 4v76:AU (17.0) BS01 rna ? GO:0003735 ... P68679 24186064
    170358 4v76:B0 (17.0) BS01 rna ? GO:0000027 ... P0A7N4 24186064
    170359 4v76:B1 (17.0) BS01 rna ? GO:0000027 ... P0A7N9 24186064
    170360 4v76:B2 (17.0) BS01 rna ? GO:0002181 ... P0A7P5 24186064
    170361 4v76:B3 (17.0) BS01 rna ? GO:0002181 ... P0A7Q1 24186064
    170362 4v76:B4 (17.0) BS01 rna ? GO:0002181 ... P0A7Q6 24186064
    170363 4v76:B5 (17.0) BS01 rna ? GO:0000027 ... P0A7L0 24186064
    170364 4v76:B5 (17.0) BS02 rna ? GO:0000027 ... P0A7L0 24186064
    170365 4v76:BC (17.0) BS01 rna ? GO:0000027 ... P60422 24186064
    170366 4v76:BD (17.0) BS01 rna ? GO:0000027 ... P60438 24186064
    170367 4v76:BE (17.0) BS01 rna ? GO:0001070 ... P60723 24186064
    170368 4v76:BF (17.0) BS01 rna ? GO:0000027 ... P62399 24186064
    170369 4v76:BF (17.0) BS02 rna ? GO:0000027 ... P62399 24186064
    170370 4v76:BF (17.0) BS03 rna ? GO:0000027 ... P62399 24186064
    170371 4v76:BG (17.0) BS01 rna ? GO:0000027 ... P0AG55 24186064
    170372 4v76:BH (17.0) BS01 rna ? GO:0002181 ... P0A7R1 24186064
    170373 4v76:BI (17.0) BS01 rna ? GO:0000027 ... P0A7J7 24186064
    170374 4v76:BJ (17.0) BS01 rna ? GO:0002181 ... P0AA10 24186064
    170375 4v76:BK (17.0) BS01 rna ? GO:0002181 ... P0ADY3 24186064
    170376 4v76:BK (17.0) BS02 rna ? GO:0002181 ... P0ADY3 24186064
    170377 4v76:BL (17.0) BS01 rna ? GO:0002181 ... P02413 24186064
    170378 4v76:BM (17.0) BS01 rna ? GO:0000027 ... P0ADY7 24186064
    170379 4v76:BM (17.0) BS02 rna ? GO:0000027 ... P0ADY7 24186064
    170380 4v76:BN (17.0) BS01 rna ? GO:0000027 ... P0AG44 24186064
    170381 4v76:BO (17.0) BS01 rna ? GO:0002181 ... P0C018 24186064
    170382 4v76:BO (17.0) BS02 rna ? GO:0002181 ... P0C018 24186064
    170383 4v76:BP (17.0) BS01 rna ? GO:0000027 ... P0A7K6 24186064
    170384 4v76:BP (17.0) BS02 rna ? GO:0000027 ... P0A7K6 24186064
    170385 4v76:BQ (17.0) BS01 rna ? GO:0000027 ... P0A7L3 24186064
    170386 4v76:BR (17.0) BS01 rna ? GO:0002181 ... P0AG48 24186064
    170387 4v76:BS (17.0) BS01 rna ? GO:0002181 ... P61175 24186064
    170388 4v76:BT (17.0) BS01 rna ? GO:0000027 ... P0ADZ0 24186064
    170389 4v76:BU (17.0) BS01 rna ? GO:0000027 ... P60624 24186064
    170390 4v76:BV (17.0) BS01 rna ? GO:0000027 ... P68919 24186064
    170391 4v76:BW (17.0) BS01 rna ? GO:0000027 ... P0A7L8 24186064
    170392 4v76:BW (17.0) BS02 rna ? GO:0000027 ... P0A7L8 24186064
    170393 4v76:BX (17.0) BS01 rna ? GO:0000027 ... P0A7M2 24186064
    170394 4v76:BY (17.0) BS01 rna ? GO:0000027 ... P0A7M6 24186064
    170395 4v76:BZ (17.0) BS01 rna ? GO:0000027 ... P0AG51 24186064
    170396 4v76:BZ (17.0) BS02 rna ? GO:0000027 ... P0AG51 24186064
    170397 4v77:AB (17.0) BS01 rna ? GO:0000028 ... P0A7V0 24186064
    170398 4v77:AD (17.0) BS01 rna ? GO:0000028 ... P0A7V8 24186064
    170399 4v77:AE (17.0) BS01 rna ? GO:0000028 ... P0A7W1 24186064
    170400 4v77:AF (17.0) BS01 rna ? GO:0003735 ... P02358 24186064
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • zhanglabzhanggroup.org | +65-6601-1241 | Computing 1, 13 Computing Drive, Singapore 117417