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BioLiP
Download all results in tab-seperated text for 594392 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    162001 4v4e:U (2.0) BS01 CA 1.97.1.2 GO:0009055 ... P80563 15284442
    162002 4v4e:U (2.0) BS02 MGD 1.97.1.2 GO:0009055 ... P80563 15284442
    162003 4v4e:U (2.0) BS03 MGD 1.97.1.2 GO:0009055 ... P80563 15284442
    162004 4v4e:U (2.0) BS04 BTT 1.97.1.2 GO:0009055 ... P80563 15284442
    162005 4v4e:W (2.0) BS01 CA 1.97.1.2 GO:0009055 ... P80563 15284442
    162006 4v4e:W (2.0) BS02 MGD 1.97.1.2 GO:0009055 ... P80563 15284442
    162007 4v4e:W (2.0) BS03 MGD 1.97.1.2 GO:0009055 ... P80563 15284442
    162008 4v4e:W (2.0) BS04 BTT 1.97.1.2 GO:0009055 ... P80563 15284442
    162009 4v4g:AB (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162010 4v4g:AD (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162011 4v4g:AE (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162012 4v4g:AF (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162013 4v4g:AG (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162014 4v4g:AH (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162015 4v4g:AI (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162016 4v4g:AJ (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162017 4v4g:AK (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162018 4v4g:AL (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162019 4v4g:AM (11.5) BS01 rna N/A GO:0003676 ... N/A 15502846
    162020 4v4g:AM (11.5) BS02 rna N/A GO:0003676 ... N/A 15502846
    162021 4v4g:AN (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162022 4v4g:AO (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162023 4v4g:AO (11.5) BS02 rna N/A GO:0003735 ... N/A 15502846
    162024 4v4g:AP (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162025 4v4g:AQ (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162026 4v4g:AQ (11.5) BS02 rna N/A GO:0003735 ... N/A 15502846
    162027 4v4g:AR (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162028 4v4g:AS (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162029 4v4g:AT (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162030 4v4g:AT (11.5) BS02 rna N/A GO:0003723 ... N/A 15502846
    162031 4v4g:B1 (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162032 4v4g:B2 (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162033 4v4g:B3 (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162034 4v4g:B4 (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162035 4v4g:B5 (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162036 4v4g:B6 (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162037 4v4g:B7 (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162038 4v4g:BD (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162039 4v4g:BD (11.5) BS02 rna N/A GO:0003723 ... N/A 15502846
    162040 4v4g:BE (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162041 4v4g:BF (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162042 4v4g:BG (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162043 4v4g:BG (11.5) BS02 rna N/A GO:0003735 ... N/A 15502846
    162044 4v4g:BH (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162045 4v4g:BI (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162046 4v4g:BJ (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162047 4v4g:BK (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162048 4v4g:BL (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162049 4v4g:BL (11.5) BS02 rna N/A GO:0003735 ... N/A 15502846
    162050 4v4g:BM (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162051 4v4g:BN (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162052 4v4g:BN (11.5) BS02 rna N/A GO:0003735 ... N/A 15502846
    162053 4v4g:BO (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162054 4v4g:BP (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162055 4v4g:BP (11.5) BS02 rna N/A GO:0003735 ... N/A 15502846
    162056 4v4g:BQ (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162057 4v4g:BQ (11.5) BS02 rna N/A GO:0003735 ... N/A 15502846
    162058 4v4g:BR (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162059 4v4g:BS (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162060 4v4g:BT (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162061 4v4g:BU (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162062 4v4g:BV (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162063 4v4g:BW (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162064 4v4g:BW (11.5) BS02 rna N/A GO:0003735 ... N/A 15502846
    162065 4v4g:BX (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162066 4v4g:BY (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162067 4v4g:BZ (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162068 4v4g:CB (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162069 4v4g:CD (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162070 4v4g:CE (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162071 4v4g:CF (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162072 4v4g:CG (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162073 4v4g:CH (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162074 4v4g:CI (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162075 4v4g:CJ (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162076 4v4g:CK (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162077 4v4g:CL (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162078 4v4g:CM (11.5) BS01 rna N/A GO:0003676 ... N/A 15502846
    162079 4v4g:CN (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162080 4v4g:CO (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162081 4v4g:CO (11.5) BS02 rna N/A GO:0003735 ... N/A 15502846
    162082 4v4g:CP (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162083 4v4g:CQ (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162084 4v4g:CR (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162085 4v4g:CS (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162086 4v4g:CT (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162087 4v4g:D1 (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162088 4v4g:D2 (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162089 4v4g:D3 (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162090 4v4g:D4 (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162091 4v4g:D5 (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162092 4v4g:D6 (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162093 4v4g:D7 (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162094 4v4g:DD (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162095 4v4g:DD (11.5) BS02 rna N/A GO:0003723 ... N/A 15502846
    162096 4v4g:DE (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162097 4v4g:DF (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162098 4v4g:DG (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162099 4v4g:DG (11.5) BS02 rna N/A GO:0003735 ... N/A 15502846
    162100 4v4g:DG (11.5) BS03 rna N/A GO:0003735 ... N/A 15502846
    162101 4v4g:DH (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162102 4v4g:DI (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162103 4v4g:DJ (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162104 4v4g:DK (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162105 4v4g:DL (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162106 4v4g:DM (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162107 4v4g:DN (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162108 4v4g:DN (11.5) BS02 rna N/A GO:0003735 ... N/A 15502846
    162109 4v4g:DO (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162110 4v4g:DP (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162111 4v4g:DP (11.5) BS02 rna N/A GO:0003735 ... N/A 15502846
    162112 4v4g:DQ (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162113 4v4g:DQ (11.5) BS02 rna N/A GO:0003735 ... N/A 15502846
    162114 4v4g:DR (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162115 4v4g:DS (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162116 4v4g:DT (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162117 4v4g:DU (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162118 4v4g:DV (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162119 4v4g:DW (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162120 4v4g:DW (11.5) BS02 rna N/A GO:0003735 ... N/A 15502846
    162121 4v4g:DX (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162122 4v4g:DY (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162123 4v4g:DZ (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162124 4v4g:DZ (11.5) BS02 rna N/A GO:0003735 ... N/A 15502846
    162125 4v4g:EB (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162126 4v4g:ED (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162127 4v4g:EE (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162128 4v4g:EF (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162129 4v4g:EG (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162130 4v4g:EH (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162131 4v4g:EI (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162132 4v4g:EJ (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162133 4v4g:EK (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162134 4v4g:EL (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162135 4v4g:EM (11.5) BS01 rna N/A GO:0003676 ... N/A 15502846
    162136 4v4g:EM (11.5) BS02 rna N/A GO:0003676 ... N/A 15502846
    162137 4v4g:EN (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162138 4v4g:EO (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162139 4v4g:EP (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162140 4v4g:EQ (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162141 4v4g:ER (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162142 4v4g:ES (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162143 4v4g:ET (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162144 4v4g:F1 (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162145 4v4g:F2 (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162146 4v4g:F3 (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162147 4v4g:F4 (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162148 4v4g:F5 (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162149 4v4g:F6 (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162150 4v4g:F7 (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162151 4v4g:FD (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162152 4v4g:FD (11.5) BS02 rna N/A GO:0003723 ... N/A 15502846
    162153 4v4g:FE (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162154 4v4g:FF (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162155 4v4g:FG (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162156 4v4g:FG (11.5) BS02 rna N/A GO:0003735 ... N/A 15502846
    162157 4v4g:FG (11.5) BS03 rna N/A GO:0003735 ... N/A 15502846
    162158 4v4g:FH (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162159 4v4g:FI (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162160 4v4g:FJ (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162161 4v4g:FK (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162162 4v4g:FL (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162163 4v4g:FM (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162164 4v4g:FN (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162165 4v4g:FN (11.5) BS02 rna N/A GO:0003735 ... N/A 15502846
    162166 4v4g:FO (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162167 4v4g:FP (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162168 4v4g:FP (11.5) BS02 rna N/A GO:0003735 ... N/A 15502846
    162169 4v4g:FQ (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162170 4v4g:FQ (11.5) BS02 rna N/A GO:0003735 ... N/A 15502846
    162171 4v4g:FR (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162172 4v4g:FS (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162173 4v4g:FT (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162174 4v4g:FU (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162175 4v4g:FV (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162176 4v4g:FW (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162177 4v4g:FW (11.5) BS02 rna N/A GO:0003735 ... N/A 15502846
    162178 4v4g:FX (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162179 4v4g:FX (11.5) BS02 rna N/A GO:0003735 ... N/A 15502846
    162180 4v4g:FY (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162181 4v4g:FZ (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162182 4v4g:FZ (11.5) BS02 rna N/A GO:0003735 ... N/A 15502846
    162183 4v4g:GB (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162184 4v4g:GD (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162185 4v4g:GE (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162186 4v4g:GF (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162187 4v4g:GG (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162188 4v4g:GH (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162189 4v4g:GI (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162190 4v4g:GJ (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    162191 4v4g:GK (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162192 4v4g:GL (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162193 4v4g:GM (11.5) BS01 rna N/A GO:0003676 ... N/A 15502846
    162194 4v4g:GN (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162195 4v4g:GO (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162196 4v4g:GO (11.5) BS02 rna N/A GO:0003735 ... N/A 15502846
    162197 4v4g:GP (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162198 4v4g:GQ (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162199 4v4g:GR (11.5) BS01 rna N/A GO:0003735 ... N/A 15502846
    162200 4v4g:GS (11.5) BS01 rna N/A GO:0003723 ... N/A 15502846
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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