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BioLiP
Download all results in tab-seperated text for 817662 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    815201 8ylb:D (2.15) BS01 A1LZA 3.4.21.92 GO:0004176 ... Q16740 38620134
    815202 8ylb:D (2.15) BS02 A1LZA 3.4.21.92 GO:0004176 ... Q16740 38620134
    815203 8ylb:E (2.15) BS01 A1LZA 3.4.21.92 GO:0004176 ... Q16740 38620134
    815204 8ylb:E (2.15) BS02 A1LZA 3.4.21.92 GO:0004176 ... Q16740 38620134
    815205 8ylb:F (2.15) BS01 A1LZA 3.4.21.92 GO:0004176 ... Q16740 38620134
    815206 8ylb:F (2.15) BS02 A1LZA 3.4.21.92 GO:0004176 ... Q16740 38620134
    815207 8ylb:G (2.15) BS01 A1LZA 3.4.21.92 GO:0004176 ... Q16740 38620134
    815208 8ylb:G (2.15) BS02 A1LZA 3.4.21.92 GO:0004176 ... Q16740 38620134
    815209 8ylb:H (2.15) BS01 A1LZA 3.4.21.92 GO:0004176 ... Q16740 38620134
    815210 8ylb:H (2.15) BS02 A1LZA 3.4.21.92 GO:0004176 ... Q16740 38620134
    815211 8ylb:I (2.15) BS01 A1LZA 3.4.21.92 GO:0004176 ... Q16740 38620134
    815212 8ylb:I (2.15) BS02 A1LZA 3.4.21.92 GO:0004176 ... Q16740 38620134
    815213 8ylb:J (2.15) BS01 A1LZA 3.4.21.92 GO:0004176 ... Q16740 38620134
    815214 8ylb:J (2.15) BS02 A1LZA 3.4.21.92 GO:0004176 ... Q16740 38620134
    815215 8ylb:K (2.15) BS01 A1LZA 3.4.21.92 GO:0004176 ... Q16740 38620134
    815216 8ylb:K (2.15) BS02 A1LZA 3.4.21.92 GO:0004176 ... Q16740 38620134
    815217 8ylb:L (2.15) BS01 A1LZA 3.4.21.92 GO:0004176 ... Q16740 38620134
    815218 8ylb:L (2.15) BS02 A1LZA 3.4.21.92 GO:0004176 ... Q16740 38620134
    815219 8ylb:M (2.15) BS01 A1LZA 3.4.21.92 GO:0004176 ... Q16740 38620134
    815220 8ylb:M (2.15) BS02 A1LZA 3.4.21.92 GO:0004176 ... Q16740 38620134
    815221 8ylb:N (2.15) BS01 A1LZA 3.4.21.92 GO:0004176 ... Q16740 38620134
    815222 8ylb:N (2.15) BS02 A1LZA 3.4.21.92 GO:0004176 ... Q16740 38620134
    815223 8yle:A (1.86) BS01 ACP 3.1.-.-
    5.6.2.4    		 GO:0003676 ... Q14191 N/A
    815224 8yle:A (1.86) BS02 ZN 3.1.-.-
    5.6.2.4    		 GO:0003676 ... Q14191 N/A
    815225 8yle:A (1.86) BS03 ZN 3.1.-.-
    5.6.2.4    		 GO:0003676 ... Q14191 N/A
    815226 8yoo:LA (2.0) BS01 rna N/A GO:0002181 ... P62917 38942792
    815227 8yoo:LA (2.0) BS02 rna N/A GO:0002181 ... P62917 38942792
    815228 8yoo:LA (2.0) BS03 MG N/A GO:0002181 ... P62917 38942792
    815229 8yoo:LB (2.0) BS01 rna N/A GO:0002181 ... P39023 38942792
    815230 8yoo:LC (2.0) BS01 rna N/A GO:0002181 ... P36578 38942792
    815231 8yoo:LC (2.0) BS02 rna N/A GO:0002181 ... P36578 38942792
    815232 8yoo:LD (2.0) BS01 rna N/A GO:0000027 ... P46777 38942792
    815233 8yoo:LD (2.0) BS02 rna N/A GO:0000027 ... P46777 38942792
    815234 8yoo:LE (2.0) BS01 rna N/A GO:0000027 ... Q02878 38942792
    815235 8yoo:LF (2.0) BS01 rna N/A GO:0000463 ... P18124 38942792
    815236 8yoo:LF (2.0) BS02 rna N/A GO:0000463 ... P18124 38942792
    815237 8yoo:LG (2.0) BS01 rna N/A GO:0000470 ... P62424 38942792
    815238 8yoo:LG (2.0) BS02 rna N/A GO:0000470 ... P62424 38942792
    815239 8yoo:LH (2.0) BS01 rna N/A GO:0002181 ... P32969 38942792
    815240 8yoo:LI (2.0) BS01 rna N/A GO:0000027 ... P27635 38942792
    815241 8yoo:LI (2.0) BS02 rna N/A GO:0000027 ... P27635 38942792
    815242 8yoo:LJ (2.0) BS01 rna N/A GO:0000027 ... P62913 38942792
    815243 8yoo:LJ (2.0) BS02 rna N/A GO:0000027 ... P62913 38942792
    815244 8yoo:LL (2.0) BS01 rna N/A GO:0001824 ... P26373 38942792
    815245 8yoo:LL (2.0) BS02 rna N/A GO:0001824 ... P26373 38942792
    815246 8yoo:LM (2.0) BS01 rna N/A GO:0002181 ... P50914 38942792
    815247 8yoo:LN (2.0) BS01 rna N/A GO:0002181 ... P61313 38942792
    815248 8yoo:LN (2.0) BS02 rna N/A GO:0002181 ... P61313 38942792
    815249 8yoo:LO (2.0) BS01 rna N/A GO:0002181 ... P40429 38942792
    815250 8yoo:LP (2.0) BS01 rna N/A GO:0002181 ... P18621 38942792
    815251 8yoo:LP (2.0) BS02 rna N/A GO:0002181 ... P18621 38942792
    815252 8yoo:LQ (2.0) BS01 rna N/A GO:0002181 ... Q07020 38942792
    815253 8yoo:LR (2.0) BS01 rna N/A GO:0002181 ... P84098 38942792
    815254 8yoo:LR (2.0) BS02 rna N/A GO:0002181 ... P84098 38942792
    815255 8yoo:LS (2.0) BS01 rna N/A GO:0002181 ... Q02543 38942792
    815256 8yoo:LS (2.0) BS02 rna N/A GO:0002181 ... Q02543 38942792
    815257 8yoo:LT (2.0) BS01 rna N/A GO:0002181 ... P46778 38942792
    815258 8yoo:LT (2.0) BS02 rna N/A GO:0002181 ... P46778 38942792
    815259 8yoo:LU (2.0) BS01 rna N/A GO:0002181 ... P35268 38942792
    815260 8yoo:LV (2.0) BS01 rna N/A GO:0000122 ... P62829 38942792
    815261 8yoo:LW (2.0) BS01 rna N/A GO:0000027 ... P83731 38942792
    815262 8yoo:LW (2.0) BS02 rna N/A GO:0000027 ... P83731 38942792
    815263 8yoo:LX (2.0) BS01 rna N/A GO:0000027 ... P62750 38942792
    815264 8yoo:LX (2.0) BS02 rna N/A GO:0000027 ... P62750 38942792
    815265 8yoo:LY (2.0) BS01 rna N/A GO:0002181 ... P61254 38942792
    815266 8yoo:LY (2.0) BS02 rna N/A GO:0002181 ... P61254 38942792
    815267 8yoo:LZ (2.0) BS01 rna N/A GO:0002181 ... P61353 38942792
    815268 8yoo:La (2.0) BS01 rna N/A GO:0002181 ... P46776 38942792
    815269 8yoo:Lb (2.0) BS01 rna N/A GO:0002181 ... P47914 38942792
    815270 8yoo:Lc (2.0) BS01 rna N/A GO:0002181 ... P62888 38942792
    815271 8yoo:Ld (2.0) BS01 rna N/A GO:0002181 ... P62899 38942792
    815272 8yoo:Le (2.0) BS01 rna N/A GO:0002181 ... P62910 38942792
    815273 8yoo:Le (2.0) BS02 MG N/A GO:0002181 ... P62910 38942792
    815274 8yoo:Lf (2.0) BS01 rna N/A GO:0000049 ... P18077 38942792
    815275 8yoo:Lg (2.0) BS01 rna N/A GO:0002181 ... P49207 38942792
    815276 8yoo:Lg (2.0) BS02 MG N/A GO:0002181 ... P49207 38942792
    815277 8yoo:Lg (2.0) BS03 ZN N/A GO:0002181 ... P49207 38942792
    815278 8yoo:Lh (2.0) BS01 rna N/A GO:0000463 ... P42766 38942792
    815279 8yoo:Lh (2.0) BS02 rna N/A GO:0000463 ... P42766 38942792
    815280 8yoo:Li (2.0) BS01 rna N/A GO:0002181 ... Q9Y3U8 38942792
    815281 8yoo:Lj (2.0) BS01 rna N/A GO:0002181 ... P61927 38942792
    815282 8yoo:Lj (2.0) BS02 rna N/A GO:0002181 ... P61927 38942792
    815283 8yoo:Lj (2.0) BS03 ZN N/A GO:0002181 ... P61927 38942792
    815284 8yoo:Lk (2.0) BS01 rna N/A GO:0001501 ... P63173 38942792
    815285 8yoo:Ll (2.0) BS01 rna N/A GO:0002181 ... P62891 38942792
    815286 8yoo:Ll (2.0) BS02 rna N/A GO:0002181 ... P62891 38942792
    815287 8yoo:Lm (2.0) BS01 rna N/A GO:0002181 ... P62987 38942792
    815288 8yoo:Lm (2.0) BS02 ZN N/A GO:0002181 ... P62987 38942792
    815289 8yoo:Lo (2.0) BS01 rna N/A GO:0002181 ... P83881 38942792
    815290 8yoo:Lo (2.0) BS02 ZN N/A GO:0002181 ... P83881 38942792
    815291 8yoo:Lp (2.0) BS01 rna N/A GO:0002181 ... P61513 38942792
    815292 8yoo:Lp (2.0) BS02 ZN N/A GO:0002181 ... P61513 38942792
    815293 8yoo:Lr (2.0) BS01 rna N/A GO:0002181 ... P46779 38942792
    815294 8yoo:Ls (2.0) BS01 rna N/A GO:0000027 ... P05388 38942792
    815295 8yoo:Lt (2.0) BS01 rna N/A GO:0002181 ... P30050 38942792
    815296 8yoo:SA (2.0) BS01 rna N/A GO:0000028 ... P08865 38942792
    815297 8yoo:SB (2.0) BS01 rna N/A GO:0002181 ... P61247 38942792
    815298 8yoo:SC (2.0) BS01 rna N/A GO:0002181 ... P15880 38942792
    815299 8yoo:SD (2.0) BS01 rna N/A GO:0000977 ... P23396 38942792
    815300 8yoo:SE (2.0) BS01 rna N/A GO:0002181 ... P62701 38942792
    815301 8yoo:SF (2.0) BS01 rna N/A GO:0000028 ... P46782 38942792
    815302 8yoo:SG (2.0) BS01 rna N/A GO:0000082 ... P62753 38942792
    815303 8yoo:SH (2.0) BS01 rna N/A GO:0001843 ... P62081 38942792
    815304 8yoo:SI (2.0) BS01 rna N/A GO:0000462 ... P62241 38942792
    815305 8yoo:SI (2.0) BS02 rna N/A GO:0000462 ... P62241 38942792
    815306 8yoo:SJ (2.0) BS01 rna N/A GO:0002181 ... P46781 38942792
    815307 8yoo:SK (2.0) BS01 rna N/A GO:0002181 ... P46783 38942792
    815308 8yoo:SL (2.0) BS01 rna N/A GO:0002181 ... P62280 38942792
    815309 8yoo:SL (2.0) BS02 rna N/A GO:0002181 ... P62280 38942792
    815310 8yoo:SM (2.0) BS01 rna N/A GO:0002181 ... P25398 38942792
    815311 8yoo:SN (2.0) BS01 rna N/A GO:0002181 ... P62277 38942792
    815312 8yoo:SN (2.0) BS02 rna N/A GO:0002181 ... P62277 38942792
    815313 8yoo:SO (2.0) BS01 rna N/A GO:0000028 ... P62263 38942792
    815314 8yoo:SP (2.0) BS01 rna N/A GO:0000028 ... P62841 38942792
    815315 8yoo:SQ (2.0) BS01 rna N/A GO:0000462 ... P62249 38942792
    815316 8yoo:SR (2.0) BS01 rna N/A GO:0002181 ... P08708 38942792
    815317 8yoo:SS (2.0) BS01 rna N/A GO:0002181 ... P62269 38942792
    815318 8yoo:ST (2.0) BS01 rna N/A GO:0000028 ... P39019 38942792
    815319 8yoo:SU (2.0) BS01 rna N/A GO:0002181 ... P60866 38942792
    815320 8yoo:SW (2.0) BS01 rna N/A GO:0002181 ... P62244 38942792
    815321 8yoo:SX (2.0) BS01 rna N/A GO:0002181 ... P62266 38942792
    815322 8yoo:SY (2.0) BS01 rna N/A GO:0002181 ... P62847 38942792
    815323 8yoo:SZ (2.0) BS01 rna N/A GO:0002181 ... P62851 38942792
    815324 8yoo:Sa (2.0) BS01 rna N/A GO:0002181 ... P62854 38942792
    815325 8yoo:Sa (2.0) BS02 ZN N/A GO:0002181 ... P62854 38942792
    815326 8yoo:Sb (2.0) BS01 rna N/A GO:0000028 ... P42677 38942792
    815327 8yoo:Sc (2.0) BS01 rna N/A GO:0000028 ... P62857 38942792
    815328 8yoo:Sd (2.0) BS01 rna N/A GO:0002181 ... P62273 38942792
    815329 8yoo:Sd (2.0) BS02 ZN N/A GO:0002181 ... P62273 38942792
    815330 8yoo:Sf (2.0) BS01 rna N/A GO:0002181 ... P62979 38942792
    815331 8yoo:Sf (2.0) BS02 ZN N/A GO:0002181 ... P62979 38942792
    815332 8yoo:Sg (2.0) BS01 rna N/A GO:0001891 ... P63244 38942792
    815333 8yop:LA (2.2) BS01 rna N/A GO:0002181 ... P62917 38942792
    815334 8yop:LA (2.2) BS02 rna N/A GO:0002181 ... P62917 38942792
    815335 8yop:LA (2.2) BS03 MG N/A GO:0002181 ... P62917 38942792
    815336 8yop:LB (2.2) BS01 rna N/A GO:0002181 ... P39023 38942792
    815337 8yop:LC (2.2) BS01 rna N/A GO:0002181 ... P36578 38942792
    815338 8yop:LC (2.2) BS02 rna N/A GO:0002181 ... P36578 38942792
    815339 8yop:LD (2.2) BS01 rna N/A GO:0000027 ... P46777 38942792
    815340 8yop:LD (2.2) BS02 rna N/A GO:0000027 ... P46777 38942792
    815341 8yop:LE (2.2) BS01 rna N/A GO:0000027 ... Q02878 38942792
    815342 8yop:LF (2.2) BS01 rna N/A GO:0000463 ... P18124 38942792
    815343 8yop:LF (2.2) BS02 rna N/A GO:0000463 ... P18124 38942792
    815344 8yop:LG (2.2) BS01 rna N/A GO:0000470 ... P62424 38942792
    815345 8yop:LG (2.2) BS02 rna N/A GO:0000470 ... P62424 38942792
    815346 8yop:LH (2.2) BS01 rna N/A GO:0002181 ... P32969 38942792
    815347 8yop:LI (2.2) BS01 rna N/A GO:0000027 ... P27635 38942792
    815348 8yop:LI (2.2) BS02 rna N/A GO:0000027 ... P27635 38942792
    815349 8yop:LJ (2.2) BS01 rna N/A GO:0000027 ... P62913 38942792
    815350 8yop:LJ (2.2) BS02 rna N/A GO:0000027 ... P62913 38942792
    815351 8yop:LL (2.2) BS01 rna N/A GO:0001824 ... P26373 38942792
    815352 8yop:LL (2.2) BS02 rna N/A GO:0001824 ... P26373 38942792
    815353 8yop:LM (2.2) BS01 rna N/A GO:0002181 ... P50914 38942792
    815354 8yop:LN (2.2) BS01 rna N/A GO:0002181 ... P61313 38942792
    815355 8yop:LN (2.2) BS02 rna N/A GO:0002181 ... P61313 38942792
    815356 8yop:LO (2.2) BS01 rna N/A GO:0002181 ... P40429 38942792
    815357 8yop:LP (2.2) BS01 rna N/A GO:0002181 ... P18621 38942792
    815358 8yop:LP (2.2) BS02 rna N/A GO:0002181 ... P18621 38942792
    815359 8yop:LQ (2.2) BS01 rna N/A GO:0002181 ... Q07020 38942792
    815360 8yop:LR (2.2) BS01 rna N/A GO:0002181 ... P84098 38942792
    815361 8yop:LR (2.2) BS02 rna N/A GO:0002181 ... P84098 38942792
    815362 8yop:LS (2.2) BS01 rna N/A GO:0002181 ... Q02543 38942792
    815363 8yop:LS (2.2) BS02 rna N/A GO:0002181 ... Q02543 38942792
    815364 8yop:LT (2.2) BS01 rna N/A GO:0002181 ... P46778 38942792
    815365 8yop:LT (2.2) BS02 rna N/A GO:0002181 ... P46778 38942792
    815366 8yop:LU (2.2) BS01 rna N/A GO:0002181 ... P35268 38942792
    815367 8yop:LV (2.2) BS01 rna N/A GO:0000122 ... P62829 38942792
    815368 8yop:LW (2.2) BS01 rna N/A GO:0000027 ... P83731 38942792
    815369 8yop:LW (2.2) BS02 rna N/A GO:0000027 ... P83731 38942792
    815370 8yop:LX (2.2) BS01 rna N/A GO:0000027 ... P62750 38942792
    815371 8yop:LX (2.2) BS02 rna N/A GO:0000027 ... P62750 38942792
    815372 8yop:LY (2.2) BS01 rna N/A GO:0002181 ... P61254 38942792
    815373 8yop:LY (2.2) BS02 rna N/A GO:0002181 ... P61254 38942792
    815374 8yop:LZ (2.2) BS01 rna N/A GO:0002181 ... P61353 38942792
    815375 8yop:La (2.2) BS01 rna N/A GO:0002181 ... P46776 38942792
    815376 8yop:Lb (2.2) BS01 rna N/A GO:0002181 ... P47914 38942792
    815377 8yop:Lc (2.2) BS01 rna N/A GO:0002181 ... P62888 38942792
    815378 8yop:Ld (2.2) BS01 rna N/A GO:0002181 ... P62899 38942792
    815379 8yop:Le (2.2) BS01 rna N/A GO:0002181 ... P62910 38942792
    815380 8yop:Le (2.2) BS02 MG N/A GO:0002181 ... P62910 38942792
    815381 8yop:Lf (2.2) BS01 rna N/A GO:0000049 ... P18077 38942792
    815382 8yop:Lg (2.2) BS01 rna N/A GO:0002181 ... P49207 38942792
    815383 8yop:Lg (2.2) BS02 MG N/A GO:0002181 ... P49207 38942792
    815384 8yop:Lg (2.2) BS03 ZN N/A GO:0002181 ... P49207 38942792
    815385 8yop:Lh (2.2) BS01 rna N/A GO:0000463 ... P42766 38942792
    815386 8yop:Lh (2.2) BS02 rna N/A GO:0000463 ... P42766 38942792
    815387 8yop:Li (2.2) BS01 rna N/A GO:0002181 ... Q9Y3U8 38942792
    815388 8yop:Lj (2.2) BS01 rna N/A GO:0002181 ... P61927 38942792
    815389 8yop:Lj (2.2) BS02 rna N/A GO:0002181 ... P61927 38942792
    815390 8yop:Lj (2.2) BS03 ZN N/A GO:0002181 ... P61927 38942792
    815391 8yop:Lk (2.2) BS01 rna N/A GO:0001501 ... P63173 38942792
    815392 8yop:Ll (2.2) BS01 rna N/A GO:0002181 ... P62891 38942792
    815393 8yop:Ll (2.2) BS02 rna N/A GO:0002181 ... P62891 38942792
    815394 8yop:Lm (2.2) BS01 rna N/A GO:0002181 ... P62987 38942792
    815395 8yop:Lm (2.2) BS02 ZN N/A GO:0002181 ... P62987 38942792
    815396 8yop:Lo (2.2) BS01 rna N/A GO:0002181 ... P83881 38942792
    815397 8yop:Lo (2.2) BS02 ZN N/A GO:0002181 ... P83881 38942792
    815398 8yop:Lp (2.2) BS01 rna N/A GO:0002181 ... P61513 38942792
    815399 8yop:Lp (2.2) BS02 ZN N/A GO:0002181 ... P61513 38942792
    815400 8yop:Lr (2.2) BS01 rna N/A GO:0002181 ... P46779 38942792
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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