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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 832530 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    831601 9b20:A (1.55) BS03 AMP 3.6.1.13 GO:0000166 ... A0A0H3GVQ7 N/A
    831602 9b20:B (1.55) BS01 AMP 3.6.1.13 GO:0000166 ... A0A0H3GVQ7 N/A
    831603 9b20:B (1.55) BS02 AMP 3.6.1.13 GO:0000166 ... A0A0H3GVQ7 N/A
    831604 9b20:B (1.55) BS03 MG 3.6.1.13 GO:0000166 ... A0A0H3GVQ7 N/A
    831605 9b20:B (1.55) BS04 MG 3.6.1.13 GO:0000166 ... A0A0H3GVQ7 N/A
    831606 9b21:A (1.6) BS01 AR6 3.6.1.13 GO:0000166 ... A0A0H3GVQ7 N/A
    831607 9b21:A (1.6) BS02 MG 3.6.1.13 GO:0000166 ... A0A0H3GVQ7 N/A
    831608 9b21:A (1.6) BS03 MG 3.6.1.13 GO:0000166 ... A0A0H3GVQ7 N/A
    831609 9b21:A (1.6) BS04 AR6 3.6.1.13 GO:0000166 ... A0A0H3GVQ7 N/A
    831610 9b21:B (1.6) BS01 AR6 3.6.1.13 GO:0000166 ... A0A0H3GVQ7 N/A
    831611 9b21:B (1.6) BS02 AR6 3.6.1.13 GO:0000166 ... A0A0H3GVQ7 N/A
    831612 9b21:B (1.6) BS03 MG 3.6.1.13 GO:0000166 ... A0A0H3GVQ7 N/A
    831613 9b21:B (1.6) BS04 MG 3.6.1.13 GO:0000166 ... A0A0H3GVQ7 N/A
    831614 9b22:A (1.3) BS01 MG 3.6.1.13 GO:0000166 ... A0A0H3GVQ7 N/A
    831615 9b22:A (1.3) BS02 MG 3.6.1.13 GO:0000166 ... A0A0H3GVQ7 N/A
    831616 9b22:A (1.3) BS03 AR6 3.6.1.13 GO:0000166 ... A0A0H3GVQ7 N/A
    831617 9b22:A (1.3) BS04 AR6 3.6.1.13 GO:0000166 ... A0A0H3GVQ7 N/A
    831618 9b22:A (1.3) BS05 AMP 3.6.1.13 GO:0000166 ... A0A0H3GVQ7 N/A
    831619 9b22:B (1.3) BS01 AR6 3.6.1.13 GO:0000166 ... A0A0H3GVQ7 N/A
    831620 9b22:B (1.3) BS02 MG 3.6.1.13 GO:0000166 ... A0A0H3GVQ7 N/A
    831621 9b22:B (1.3) BS03 MG 3.6.1.13 GO:0000166 ... A0A0H3GVQ7 N/A
    831622 9b22:B (1.3) BS04 AR6 3.6.1.13 GO:0000166 ... A0A0H3GVQ7 N/A
    831623 9b22:B (1.3) BS05 AMP 3.6.1.13 GO:0000166 ... A0A0H3GVQ7 N/A
    831624 9b27:A (3.51) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    831625 9b27:B (3.51) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    831626 9b27:C (3.51) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    831627 9b27:C (3.51) BS02 MG 3.6.4.- GO:0000287 ... P68135 38843827
    831628 9b27:D (3.51) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    831629 9b27:E (3.51) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    831630 9b27:F (3.51) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    831631 9b33:E (4.07) BS01 ZN ? GO:0005509 ... C0HJY1 38778115
    831632 9b33:E (4.07) BS02 CA ? GO:0005509 ... C0HJY1 38778115
    831633 9b33:F (4.07) BS01 ZN ? GO:0005509 ... C0HJY1 38778115
    831634 9b33:F (4.07) BS02 CA ? GO:0005509 ... C0HJY1 38778115
    831635 9b34:E (3.58) BS01 ZN ? N/A P02866 38778115
    831636 9b34:E (3.58) BS02 CA ? N/A P02866 38778115
    831637 9b34:F (3.58) BS01 ZN ? N/A P02866 38778115
    831638 9b34:F (3.58) BS02 CA ? N/A P02866 38778115
    831639 9b35:A (3.4) BS01 GLU ? N/A P42260 38778115
    831640 9b35:B (3.4) BS01 GLU ? N/A P42260 38778115
    831641 9b35:C (3.4) BS01 GLU ? N/A P42260 38778115
    831642 9b35:D (3.4) BS01 GLU ? N/A P42260 38778115
    831643 9b36:A (4.29) BS01 GAL ? N/A P42260 38778115
    831644 9b36:A (4.29) BS02 2J9 ? N/A P42260 38778115
    831645 9b36:A (4.29) BS03 GLU ? N/A P42260 38778115
    831646 9b36:A (4.29) BS04 CLR ? N/A P42260 38778115
    831647 9b36:A (4.29) BS05 CLR ? N/A P42260 38778115
    831648 9b36:A (4.29) BS06 2J9 ? N/A P42260 38778115
    831649 9b36:B (4.29) BS01 2J9 ? N/A P42260 38778115
    831650 9b36:B (4.29) BS02 GLU ? N/A P42260 38778115
    831651 9b36:B (4.29) BS03 2J9 ? N/A P42260 38778115
    831652 9b36:C (4.29) BS01 MAN ? N/A P42260 38778115
    831653 9b36:C (4.29) BS02 2J9 ? N/A P42260 38778115
    831654 9b36:C (4.29) BS03 CLR ? N/A P42260 38778115
    831655 9b36:C (4.29) BS04 2J9 ? N/A P42260 38778115
    831656 9b36:C (4.29) BS05 GLU ? N/A P42260 38778115
    831657 9b36:C (4.29) BS06 CLR ? N/A P42260 38778115
    831658 9b36:D (4.29) BS01 2J9 ? N/A P42260 38778115
    831659 9b36:D (4.29) BS02 2J9 ? N/A P42260 38778115
    831660 9b36:D (4.29) BS03 GLU ? N/A P42260 38778115
    831661 9b36:E (4.29) BS01 MAN ? GO:0005509 ... C0HJY1 38778115
    831662 9b36:E (4.29) BS02 ZN ? GO:0005509 ... C0HJY1 38778115
    831663 9b36:E (4.29) BS03 CA ? GO:0005509 ... C0HJY1 38778115
    831664 9b36:F (4.29) BS01 MAN ? GO:0005509 ... C0HJY1 38778115
    831665 9b36:F (4.29) BS02 ZN ? GO:0005509 ... C0HJY1 38778115
    831666 9b36:F (4.29) BS03 CA ? GO:0005509 ... C0HJY1 38778115
    831667 9b36:G (4.29) BS01 MAN ? GO:0005509 ... C0HJY1 38778115
    831668 9b36:G (4.29) BS02 ZN ? GO:0005509 ... C0HJY1 38778115
    831669 9b36:G (4.29) BS03 CA ? GO:0005509 ... C0HJY1 38778115
    831670 9b36:H (4.29) BS01 MAN ? GO:0005509 ... C0HJY1 38778115
    831671 9b36:H (4.29) BS02 ZN ? GO:0005509 ... C0HJY1 38778115
    831672 9b36:H (4.29) BS03 CA ? GO:0005509 ... C0HJY1 38778115
    831673 9b37:A (6.66) BS01 2J9 ? N/A P42260 38778115
    831674 9b37:A (6.66) BS02 GLU ? N/A P42260 38778115
    831675 9b37:A (6.66) BS03 CLR ? N/A P42260 38778115
    831676 9b37:A (6.66) BS04 CLR ? N/A P42260 38778115
    831677 9b37:A (6.66) BS05 2J9 ? N/A P42260 38778115
    831678 9b37:B (6.66) BS01 2J9 ? N/A P42260 38778115
    831679 9b37:B (6.66) BS02 GLU ? N/A P42260 38778115
    831680 9b37:B (6.66) BS03 2J9 ? N/A P42260 38778115
    831681 9b37:C (6.66) BS01 2J9 ? N/A P42260 38778115
    831682 9b37:C (6.66) BS02 CLR ? N/A P42260 38778115
    831683 9b37:C (6.66) BS03 2J9 ? N/A P42260 38778115
    831684 9b37:C (6.66) BS04 GLU ? N/A P42260 38778115
    831685 9b37:C (6.66) BS05 CLR ? N/A P42260 38778115
    831686 9b37:D (6.66) BS01 2J9 ? N/A P42260 38778115
    831687 9b37:D (6.66) BS02 CLR ? N/A P42260 38778115
    831688 9b37:D (6.66) BS03 2J9 ? N/A P42260 38778115
    831689 9b37:D (6.66) BS04 GLU ? N/A P42260 38778115
    831690 9b37:E (6.66) BS01 ZN ? GO:0005509 ... C0HJY1 38778115
    831691 9b37:E (6.66) BS02 CA ? GO:0005509 ... C0HJY1 38778115
    831692 9b37:F (6.66) BS01 MAN ? GO:0005509 ... C0HJY1 38778115
    831693 9b37:F (6.66) BS02 ZN ? GO:0005509 ... C0HJY1 38778115
    831694 9b37:F (6.66) BS03 CA ? GO:0005509 ... C0HJY1 38778115
    831695 9b38:A (3.36) BS01 GLU ? N/A P42260 38778115
    831696 9b38:A (3.36) BS02 MAN ? N/A P42260 38778115
    831697 9b38:B (3.36) BS01 GLU ? N/A P42260 38778115
    831698 9b38:C (3.36) BS01 GLU ? N/A P42260 38778115
    831699 9b38:C (3.36) BS02 MAN ? N/A P42260 38778115
    831700 9b38:D (3.36) BS01 GLU ? N/A P42260 38778115
    831701 9b39:A (3.84) BS01 MAN ? N/A P42260 38778115
    831702 9b39:A (3.84) BS02 GLU ? N/A P42260 38778115
    831703 9b39:B (3.84) BS01 GLU ? N/A P42260 38778115
    831704 9b39:C (3.84) BS01 GLU ? N/A P42260 38778115
    831705 9b39:D (3.84) BS01 GLU ? N/A P42260 38778115
    831706 9b3d:A (3.41) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    831707 9b3d:B (3.41) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    831708 9b3d:C (3.41) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    831709 9b3d:C (3.41) BS02 MG 3.6.4.- GO:0000287 ... P68135 38843827
    831710 9b3d:D (3.41) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    831711 9b3d:E (3.41) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    831712 9b3d:F (3.41) BS01 ADP 3.6.4.- GO:0000287 ... P68135 38843827
    831713 9b3p:A (3.0) BS01 dna ? GO:0000775 ... P84243 38920622
    831714 9b3p:A (3.0) BS02 dna ? GO:0000775 ... P84243 38920622
    831715 9b3p:B (3.0) BS01 dna ? GO:0000786 ... P62799 38920622
    831716 9b3p:B (3.0) BS02 dna ? GO:0000786 ... P62799 38920622
    831717 9b3p:C (3.0) BS01 dna ? GO:0000786 ... P0C0S6 38920622
    831718 9b3p:C (3.0) BS02 dna ? GO:0000786 ... P0C0S6 38920622
    831719 9b3p:D (3.0) BS01 dna ? GO:0000786 ... P02281 38920622
    831720 9b3p:D (3.0) BS02 dna ? GO:0000786 ... P02281 38920622
    831721 9b3p:E (3.0) BS01 dna ? GO:0000775 ... P84243 38920622
    831722 9b3p:E (3.0) BS02 dna ? GO:0000775 ... P84243 38920622
    831723 9b3p:F (3.0) BS01 dna ? GO:0000786 ... P62799 38920622
    831724 9b3p:F (3.0) BS02 dna ? GO:0000786 ... P62799 38920622
    831725 9b3p:G (3.0) BS01 dna ? GO:0000786 ... P0C0S6 38920622
    831726 9b3p:G (3.0) BS02 dna ? GO:0000786 ... P0C0S6 38920622
    831727 9b3p:H (3.0) BS01 dna ? GO:0000786 ... P02281 38920622
    831728 9b3p:H (3.0) BS02 dna ? GO:0000786 ... P02281 38920622
    831729 9b3q:A (3.6) BS01 ADP 3.6.4.- GO:0000146 ... P68032 N/A
    831730 9b3q:D (3.6) BS01 ADP 3.6.4.- GO:0000146 ... P68032 N/A
    831731 9b3q:E (3.6) BS01 ADP 3.6.4.- GO:0000146 ... P68032 N/A
    831732 9b3r:A (3.5) BS01 ADP 3.6.4.- GO:0000146 ... P68032 N/A
    831733 9b3r:D (3.5) BS01 ADP 3.6.4.- GO:0000146 ... P68032 N/A
    831734 9b3r:E (3.5) BS01 ADP 3.6.4.- GO:0000146 ... P68032 N/A
    831735 9b4h:A (3.1) BS01 FUB ? N/A A8J9H7 38552624
    831736 9b4h:A (3.1) BS02 FUB ? N/A A8J9H7 38552624
    831737 9b4h:A (3.1) BS03 FUB ? N/A A8J9H7 38552624
    831738 9b4h:A (3.1) BS04 FUB ? N/A A8J9H7 38552624
    831739 9b4h:A (3.1) BS05 FUB ? N/A A8J9H7 38552624
    831740 9b4h:A (3.1) BS06 FUB ? N/A A8J9H7 38552624
    831741 9b4h:A (3.1) BS07 FUB ? N/A A8J9H7 38552624
    831742 9b4h:A (3.1) BS08 FUB ? N/A A8J9H7 38552624
    831743 9b4h:A (3.1) BS09 FUB ? N/A A8J9H7 38552624
    831744 9b4h:A (3.1) BS10 FUB ? N/A A8J9H7 38552624
    831745 9b4h:A (3.1) BS11 FUB ? N/A A8J9H7 38552624
    831746 9b4h:A (3.1) BS12 FUB ? N/A A8J9H7 38552624
    831747 9b4h:A (3.1) BS13 FUB ? N/A A8J9H7 38552624
    831748 9b4h:A (3.1) BS14 FUB ? N/A A8J9H7 38552624
    831749 9b4h:A (3.1) BS15 FUB ? N/A A8J9H7 38552624
    831750 9b4h:A (3.1) BS16 FUB ? N/A A8J9H7 38552624
    831751 9b4h:A (3.1) BS17 FUB ? N/A A8J9H7 38552624
    831752 9b4h:A (3.1) BS18 FUB ? N/A A8J9H7 38552624
    831753 9b4h:A (3.1) BS19 FUB ? N/A A8J9H7 38552624
    831754 9b4h:A (3.1) BS20 A1AIO ? N/A A8J9H7 38552624
    831755 9b4h:A (3.1) BS21 A1AIO ? N/A A8J9H7 38552624
    831756 9b4h:A (3.1) BS22 A1AIO ? N/A A8J9H7 38552624
    831757 9b4h:A (3.1) BS23 A1AIO ? N/A A8J9H7 38552624
    831758 9b4h:A (3.1) BS24 A1AIO ? N/A A8J9H7 38552624
    831759 9b4h:A (3.1) BS25 A1AIO ? N/A A8J9H7 38552624
    831760 9b4h:A (3.1) BS26 A1AIO ? N/A A8J9H7 38552624
    831761 9b4h:A (3.1) BS27 A1AIO ? N/A A8J9H7 38552624
    831762 9b4h:A (3.1) BS28 GLA ? N/A A8J9H7 38552624
    831763 9b4h:A (3.1) BS29 GLA ? N/A A8J9H7 38552624
    831764 9b4h:A (3.1) BS30 GLA ? N/A A8J9H7 38552624
    831765 9b4h:A (3.1) BS31 GLA ? N/A A8J9H7 38552624
    831766 9b4h:A (3.1) BS32 GLA ? N/A A8J9H7 38552624
    831767 9b4h:A (3.1) BS33 GLA ? N/A A8J9H7 38552624
    831768 9b4h:A (3.1) BS34 GLA ? N/A A8J9H7 38552624
    831769 9b4h:A (3.1) BS35 GLA ? N/A A8J9H7 38552624
    831770 9b4h:A (3.1) BS36 GLA ? N/A A8J9H7 38552624
    831771 9b4h:A (3.1) BS37 GLA ? N/A A8J9H7 38552624
    831772 9b4h:A (3.1) BS38 GLA ? N/A A8J9H7 38552624
    831773 9b4h:B (3.1) BS01 34V ? N/A A8J9H7 38552624
    831774 9b4h:B (3.1) BS02 FUB ? N/A A8J9H7 38552624
    831775 9b4h:B (3.1) BS03 FUB ? N/A A8J9H7 38552624
    831776 9b4h:B (3.1) BS04 FUB ? N/A A8J9H7 38552624
    831777 9b4h:B (3.1) BS05 FUB ? N/A A8J9H7 38552624
    831778 9b4h:B (3.1) BS06 FUB ? N/A A8J9H7 38552624
    831779 9b4h:B (3.1) BS07 FUB ? N/A A8J9H7 38552624
    831780 9b4h:B (3.1) BS08 FUB ? N/A A8J9H7 38552624
    831781 9b4h:B (3.1) BS09 FUB ? N/A A8J9H7 38552624
    831782 9b4h:B (3.1) BS10 FUB ? N/A A8J9H7 38552624
    831783 9b4h:B (3.1) BS11 FUB ? N/A A8J9H7 38552624
    831784 9b4h:B (3.1) BS12 FUB ? N/A A8J9H7 38552624
    831785 9b4h:B (3.1) BS13 FUB ? N/A A8J9H7 38552624
    831786 9b4h:B (3.1) BS14 FUB ? N/A A8J9H7 38552624
    831787 9b4h:B (3.1) BS15 FUB ? N/A A8J9H7 38552624
    831788 9b4h:B (3.1) BS16 FUB ? N/A A8J9H7 38552624
    831789 9b4h:B (3.1) BS17 FUB ? N/A A8J9H7 38552624
    831790 9b4h:B (3.1) BS18 FUB ? N/A A8J9H7 38552624
    831791 9b4h:B (3.1) BS19 FUB ? N/A A8J9H7 38552624
    831792 9b4h:B (3.1) BS20 FUB ? N/A A8J9H7 38552624
    831793 9b4h:B (3.1) BS21 FUB ? N/A A8J9H7 38552624
    831794 9b4h:B (3.1) BS22 A1AIO ? N/A A8J9H7 38552624
    831795 9b4h:B (3.1) BS23 A1AIO ? N/A A8J9H7 38552624
    831796 9b4h:B (3.1) BS24 A1AIO ? N/A A8J9H7 38552624
    831797 9b4h:B (3.1) BS25 A1AIO ? N/A A8J9H7 38552624
    831798 9b4h:B (3.1) BS26 A1AIO ? N/A A8J9H7 38552624
    831799 9b4h:B (3.1) BS27 A1AIO ? N/A A8J9H7 38552624
    831800 9b4h:B (3.1) BS28 A1AIO ? N/A A8J9H7 38552624
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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