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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 832530 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    826601 8wa2:F (3.0) BS30 AHR ? N/A A8J9H7 38552612
    826602 8wa2:F (3.0) BS31 BMA ? N/A A8J9H7 38552612
    826603 8wa2:F (3.0) BS32 MAN ? N/A A8J9H7 38552612
    826604 8wa2:F (3.0) BS33 AHR ? N/A A8J9H7 38552612
    826605 8wa2:F (3.0) BS34 CA ? N/A A8J9H7 38552612
    826606 8wa2:F (3.0) BS35 GLA ? N/A A8J9H7 38552612
    826607 8wa2:F (3.0) BS36 GLA ? N/A A8J9H7 38552612
    826608 8wa2:F (3.0) BS37 GLA ? N/A A8J9H7 38552612
    826609 8wa2:F (3.0) BS38 GLA ? N/A A8J9H7 38552612
    826610 8wa2:F (3.0) BS39 GLA ? N/A A8J9H7 38552612
    826611 8wa2:F (3.0) BS40 GLA ? N/A A8J9H7 38552612
    826612 8wa2:F (3.0) BS41 GLA ? N/A A8J9H7 38552612
    826613 8wa2:F (3.0) BS42 GLA ? N/A A8J9H7 38552612
    826614 8wa2:F (3.0) BS43 GLA ? N/A A8J9H7 38552612
    826615 8wa2:F (3.0) BS44 GLA ? N/A A8J9H7 38552612
    826616 8wa2:F (3.0) BS45 GLA ? N/A A8J9H7 38552612
    826617 8wa2:F (3.0) BS46 GLA ? N/A A8J9H7 38552612
    826618 8wa5:A (2.51) BS01 ALF 7.2.2.19 GO:0000166 ... P19156 38072058
    826619 8wa5:A (2.51) BS02 MG 7.2.2.19 GO:0000166 ... P19156 38072058
    826620 8wa5:A (2.51) BS03 CLR 7.2.2.19 GO:0000166 ... P19156 38072058
    826621 8wa7:A (1.63) BS01 THD 2.2.1.1 GO:0000287 ... P27302 N/A
    826622 8wa7:A (1.63) BS02 MG 2.2.1.1 GO:0000287 ... P27302 N/A
    826623 8wa7:A (1.63) BS03 THD 2.2.1.1 GO:0000287 ... P27302 N/A
    826624 8wa7:B (1.63) BS01 THD 2.2.1.1 GO:0000287 ... P27302 N/A
    826625 8wa7:B (1.63) BS02 THD 2.2.1.1 GO:0000287 ... P27302 N/A
    826626 8wa7:B (1.63) BS03 MG 2.2.1.1 GO:0000287 ... P27302 N/A
    826627 8wa8:A (1.48) BS01 CA 2.2.1.1 GO:0000287 ... P29401 N/A
    826628 8wa8:A (1.48) BS02 TPP 2.2.1.1 GO:0000287 ... P29401 N/A
    826629 8wa9:A (1.5) BS01 CA 2.2.1.1 GO:0000287 ... P29401 N/A
    826630 8wa9:A (1.5) BS02 THD 2.2.1.1 GO:0000287 ... P29401 N/A
    826631 8wa9:A (1.5) BS03 THD 2.2.1.1 GO:0000287 ... P29401 N/A
    826632 8wa9:B (1.5) BS01 THD 2.2.1.1 GO:0000287 ... P29401 N/A
    826633 8wa9:B (1.5) BS02 CA 2.2.1.1 GO:0000287 ... P29401 N/A
    826634 8wa9:B (1.5) BS03 THD 2.2.1.1 GO:0000287 ... P29401 N/A
    826635 8waa:A (1.5) BS01 CA 2.2.1.1 GO:0000287 ... P29401 N/A
    826636 8waa:A (1.5) BS02 3GR 2.2.1.1 GO:0000287 ... P29401 N/A
    826637 8waa:A (1.5) BS03 THD 2.2.1.1 GO:0000287 ... P29401 N/A
    826638 8waa:A (1.5) BS04 THD 2.2.1.1 GO:0000287 ... P29401 N/A
    826639 8waa:B (1.5) BS01 THD 2.2.1.1 GO:0000287 ... P29401 N/A
    826640 8waa:B (1.5) BS02 CA 2.2.1.1 GO:0000287 ... P29401 N/A
    826641 8waa:B (1.5) BS03 3GR 2.2.1.1 GO:0000287 ... P29401 N/A
    826642 8waa:B (1.5) BS04 THD 2.2.1.1 GO:0000287 ... P29401 N/A
    826643 8wak:0 (5.47) BS01 ZN ? GO:0000082 ... P51948 38127763
    826644 8wak:2 (5.47) BS01 ZN ? GO:0000438 ... Q13888 38127763
    826645 8wak:2 (5.47) BS02 ZN ? GO:0000438 ... Q13888 38127763
    826646 8wak:2 (5.47) BS03 ZN ? GO:0000438 ... Q13888 38127763
    826647 8wak:3 (5.47) BS01 ZN ? GO:0000438 ... Q13889 38127763
    826648 8wak:3 (5.47) BS02 ZN ? GO:0000438 ... Q13889 38127763
    826649 8wak:6 (5.47) BS01 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    826650 8wak:6 (5.47) BS02 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    826651 8wak:7 (5.47) BS01 SF4 3.6.4.12 GO:0000439 ... P18074 38127763
    826652 8wak:P (5.47) BS01 dna ? GO:0000785 ... P20226 38127763
    826653 8wak:P (5.47) BS02 dna ? GO:0000785 ... P20226 38127763
    826654 8wak:Q (5.47) BS01 dna ? GO:0000979 ... P52655 38127763
    826655 8wak:R (5.47) BS01 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    826656 8wak:R (5.47) BS02 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    826657 8wak:R (5.47) BS03 ZN 2.3.1.48 GO:0000776 ... Q00403 38127763
    826658 8wak:T (5.47) BS01 dna 3.6.4.12 GO:0003677 ... P13984 38127763
    826659 8wak:U (5.47) BS01 ZN ? GO:0001113 ... P29083 38127763
    826660 8wak:o (5.47) BS01 peptide 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    826661 8wak:o (5.47) BS02 rna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    826662 8wak:o (5.47) BS03 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    826663 8wak:o (5.47) BS04 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    826664 8wak:o (5.47) BS05 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    826665 8wak:o (5.47) BS06 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    826666 8wak:o (5.47) BS07 MG 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    826667 8wak:p (5.47) BS01 rna 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    826668 8wak:p (5.47) BS02 dna 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    826669 8wak:p (5.47) BS03 W0F 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    826670 8wak:p (5.47) BS04 ZN 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    826671 8wak:q (5.47) BS01 ZN ? GO:0000428 ... I3LCH3 38127763
    826672 8wak:s (5.47) BS01 dna ? GO:0003677 ... A0A4X1VTX4 38127763
    826673 8wak:w (5.47) BS01 ZN ? GO:0000428 ... P60899 38127763
    826674 8wak:w (5.47) BS02 ZN ? GO:0000428 ... P60899 38127763
    826675 8wak:x (5.47) BS01 ZN ? GO:0000428 ... A0A493TD97 38127763
    826676 8wak:z (5.47) BS01 ZN ? GO:0003677 ... A0A4X1TRS6 38127763
    826677 8wal:0 (8.52) BS01 ZN ? GO:0000082 ... P51948 38127763
    826678 8wal:2 (8.52) BS01 ZN ? GO:0000438 ... Q13888 38127763
    826679 8wal:2 (8.52) BS02 ZN ? GO:0000438 ... Q13888 38127763
    826680 8wal:2 (8.52) BS03 ZN ? GO:0000438 ... Q13888 38127763
    826681 8wal:3 (8.52) BS01 ZN ? GO:0000438 ... Q13889 38127763
    826682 8wal:3 (8.52) BS02 ZN ? GO:0000438 ... Q13889 38127763
    826683 8wal:6 (8.52) BS01 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    826684 8wal:6 (8.52) BS02 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    826685 8wal:7 (8.52) BS01 SF4 3.6.4.12 GO:0000439 ... P18074 38127763
    826686 8wal:P (8.52) BS01 dna ? GO:0000785 ... P20226 38127763
    826687 8wal:P (8.52) BS02 dna ? GO:0000785 ... P20226 38127763
    826688 8wal:Q (8.52) BS01 dna ? GO:0000979 ... P52655 38127763
    826689 8wal:R (8.52) BS01 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    826690 8wal:R (8.52) BS02 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    826691 8wal:R (8.52) BS03 ZN 2.3.1.48 GO:0000776 ... Q00403 38127763
    826692 8wal:T (8.52) BS01 dna 3.6.4.12 GO:0003677 ... P13984 38127763
    826693 8wal:U (8.52) BS01 ZN ? GO:0001113 ... P29083 38127763
    826694 8wal:o (8.52) BS01 peptide 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    826695 8wal:o (8.52) BS02 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    826696 8wal:o (8.52) BS03 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    826697 8wal:o (8.52) BS04 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    826698 8wal:o (8.52) BS05 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    826699 8wal:o (8.52) BS06 MG 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    826700 8wal:p (8.52) BS01 rna 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    826701 8wal:p (8.52) BS02 dna 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    826702 8wal:p (8.52) BS03 W0F 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    826703 8wal:p (8.52) BS04 ZN 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    826704 8wal:q (8.52) BS01 ZN ? GO:0000428 ... I3LCH3 38127763
    826705 8wal:s (8.52) BS01 dna ? GO:0003677 ... A0A4X1VTX4 38127763
    826706 8wal:w (8.52) BS01 ZN ? GO:0000428 ... P60899 38127763
    826707 8wal:w (8.52) BS02 ZN ? GO:0000428 ... P60899 38127763
    826708 8wal:x (8.52) BS01 ZN ? GO:0000428 ... A0A493TD97 38127763
    826709 8wal:z (8.52) BS01 ZN ? GO:0003677 ... A0A4X1TRS6 38127763
    826710 8wam:A (3.23) BS01 ATP ? GO:0005524 ... Q84TH5 38050355
    826711 8wam:A (3.23) BS02 MG ? GO:0005524 ... Q84TH5 38050355
    826712 8wam:A (3.23) BS03 ATP ? GO:0005524 ... Q84TH5 38050355
    826713 8wam:B (3.23) BS01 ATP ? GO:0005524 ... Q84TH5 38050355
    826714 8wam:B (3.23) BS02 ATP ? GO:0005524 ... Q84TH5 38050355
    826715 8wam:B (3.23) BS03 MG ? GO:0005524 ... Q84TH5 38050355
    826716 8wan:0 (6.07) BS01 ZN ? GO:0000082 ... P51948 38127763
    826717 8wan:2 (6.07) BS01 ZN ? GO:0000438 ... Q13888 38127763
    826718 8wan:2 (6.07) BS02 ZN ? GO:0000438 ... Q13888 38127763
    826719 8wan:2 (6.07) BS03 ZN ? GO:0000438 ... Q13888 38127763
    826720 8wan:3 (6.07) BS01 ZN ? GO:0000438 ... Q13889 38127763
    826721 8wan:3 (6.07) BS02 ZN ? GO:0000438 ... Q13889 38127763
    826722 8wan:6 (6.07) BS01 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    826723 8wan:6 (6.07) BS02 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    826724 8wan:7 (6.07) BS01 SF4 3.6.4.12 GO:0000439 ... P18074 38127763
    826725 8wan:P (6.07) BS01 dna ? GO:0000785 ... P20226 38127763
    826726 8wan:P (6.07) BS02 dna ? GO:0000785 ... P20226 38127763
    826727 8wan:Q (6.07) BS01 dna ? GO:0000979 ... P52655 38127763
    826728 8wan:R (6.07) BS01 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    826729 8wan:R (6.07) BS02 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    826730 8wan:R (6.07) BS03 ZN 2.3.1.48 GO:0000776 ... Q00403 38127763
    826731 8wan:T (6.07) BS01 dna 3.6.4.12 GO:0003677 ... P13984 38127763
    826732 8wan:U (6.07) BS01 ZN ? GO:0001113 ... P29083 38127763
    826733 8wan:o (6.07) BS01 peptide 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    826734 8wan:o (6.07) BS02 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    826735 8wan:o (6.07) BS03 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    826736 8wan:o (6.07) BS04 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    826737 8wan:o (6.07) BS05 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    826738 8wan:o (6.07) BS06 MG 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    826739 8wan:p (6.07) BS01 rna 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    826740 8wan:p (6.07) BS02 dna 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    826741 8wan:p (6.07) BS03 W0F 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    826742 8wan:p (6.07) BS04 ZN 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    826743 8wan:q (6.07) BS01 ZN ? GO:0000428 ... I3LCH3 38127763
    826744 8wan:s (6.07) BS01 dna ? GO:0003677 ... A0A4X1VTX4 38127763
    826745 8wan:w (6.07) BS01 ZN ? GO:0000428 ... P60899 38127763
    826746 8wan:w (6.07) BS02 ZN ? GO:0000428 ... P60899 38127763
    826747 8wan:x (6.07) BS01 ZN ? GO:0000428 ... A0A493TD97 38127763
    826748 8wan:z (6.07) BS01 ZN ? GO:0003677 ... A0A4X1TRS6 38127763
    826749 8wao:0 (6.4) BS01 ZN ? GO:0000082 ... P51948 38127763
    826750 8wao:2 (6.4) BS01 ZN ? GO:0000438 ... Q13888 38127763
    826751 8wao:2 (6.4) BS02 ZN ? GO:0000438 ... Q13888 38127763
    826752 8wao:2 (6.4) BS03 ZN ? GO:0000438 ... Q13888 38127763
    826753 8wao:3 (6.4) BS01 ZN ? GO:0000438 ... Q13889 38127763
    826754 8wao:3 (6.4) BS02 ZN ? GO:0000438 ... Q13889 38127763
    826755 8wao:6 (6.4) BS01 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    826756 8wao:6 (6.4) BS02 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    826757 8wao:7 (6.4) BS01 SF4 3.6.4.12 GO:0000439 ... P18074 38127763
    826758 8wao:P (6.4) BS01 dna ? GO:0000785 ... P20226 38127763
    826759 8wao:P (6.4) BS02 dna ? GO:0000785 ... P20226 38127763
    826760 8wao:Q (6.4) BS01 dna ? GO:0000979 ... P52655 38127763
    826761 8wao:R (6.4) BS01 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    826762 8wao:R (6.4) BS02 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    826763 8wao:R (6.4) BS03 ZN 2.3.1.48 GO:0000776 ... Q00403 38127763
    826764 8wao:T (6.4) BS01 dna 3.6.4.12 GO:0003677 ... P13984 38127763
    826765 8wao:U (6.4) BS01 ZN ? GO:0001113 ... P29083 38127763
    826766 8wao:o (6.4) BS01 peptide 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    826767 8wao:o (6.4) BS02 rna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    826768 8wao:o (6.4) BS03 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    826769 8wao:o (6.4) BS04 dna 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    826770 8wao:o (6.4) BS05 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    826771 8wao:o (6.4) BS06 ZN 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    826772 8wao:o (6.4) BS07 MG 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    826773 8wao:p (6.4) BS01 rna 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    826774 8wao:p (6.4) BS02 dna 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    826775 8wao:p (6.4) BS03 W0F 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    826776 8wao:p (6.4) BS04 ZN 2.7.7.6 GO:0000428 ... A0A4X1TVZ5 38127763
    826777 8wao:q (6.4) BS01 ZN ? GO:0000428 ... I3LCH3 38127763
    826778 8wao:s (6.4) BS01 dna ? GO:0003677 ... A0A4X1VTX4 38127763
    826779 8wao:w (6.4) BS01 ZN ? GO:0000428 ... P60899 38127763
    826780 8wao:w (6.4) BS02 ZN ? GO:0000428 ... P60899 38127763
    826781 8wao:x (6.4) BS01 ZN ? GO:0000428 ... A0A493TD97 38127763
    826782 8wao:z (6.4) BS01 ZN ? GO:0003677 ... A0A4X1TRS6 38127763
    826783 8wap:0 (5.85) BS01 ZN ? GO:0000082 ... P51948 38127763
    826784 8wap:2 (5.85) BS01 ZN ? GO:0000438 ... Q13888 38127763
    826785 8wap:2 (5.85) BS02 ZN ? GO:0000438 ... Q13888 38127763
    826786 8wap:2 (5.85) BS03 ZN ? GO:0000438 ... Q13888 38127763
    826787 8wap:3 (5.85) BS01 ZN ? GO:0000438 ... Q13889 38127763
    826788 8wap:3 (5.85) BS02 ZN ? GO:0000438 ... Q13889 38127763
    826789 8wap:6 (5.85) BS01 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    826790 8wap:6 (5.85) BS02 dna 5.6.2.4 GO:0000112 ... P19447 38127763
    826791 8wap:7 (5.85) BS01 SF4 3.6.4.12 GO:0000439 ... P18074 38127763
    826792 8wap:P (5.85) BS01 dna ? GO:0000785 ... P20226 38127763
    826793 8wap:P (5.85) BS02 dna ? GO:0000785 ... P20226 38127763
    826794 8wap:Q (5.85) BS01 dna ? GO:0000979 ... P52655 38127763
    826795 8wap:R (5.85) BS01 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    826796 8wap:R (5.85) BS02 dna 2.3.1.48 GO:0000776 ... Q00403 38127763
    826797 8wap:R (5.85) BS03 ZN 2.3.1.48 GO:0000776 ... Q00403 38127763
    826798 8wap:T (5.85) BS01 dna 3.6.4.12 GO:0003677 ... P13984 38127763
    826799 8wap:U (5.85) BS01 ZN ? GO:0001113 ... P29083 38127763
    826800 8wap:o (5.85) BS01 peptide 2.7.7.6 GO:0000428 ... A0A8D1DPV6 38127763
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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