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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 832530 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    823201 8uu4:D (3.0) BS01 rna ? GO:0003735 ... A0A0U5ADD0 38407413
    823202 8uu4:E (3.0) BS01 rna ? GO:0003735 ... A0A0U4VSH7 38407413
    823203 8uu4:F (3.0) BS01 rna ? GO:0000049 ... A0A0U5AWX6 38407413
    823204 8uu4:F (3.0) BS02 rna ? GO:0000049 ... A0A0U5AWX6 38407413
    823205 8uu4:G (3.0) BS01 rna ? GO:0002181 ... A0A0U5ALU0 38407413
    823206 8uu4:L (3.0) BS01 rna ? GO:0003729 ... A0A0U5AGN0 38407413
    823207 8uu4:M (3.0) BS01 rna ? GO:0003735 ... A0A0U5AP82 38407413
    823208 8uu4:M (3.0) BS02 rna ? GO:0003735 ... A0A0U5AP82 38407413
    823209 8uu4:N (3.0) BS01 rna ? GO:0003735 ... A0A0U5A6S7 38407413
    823210 8uu4:O (3.0) BS01 rna ? GO:0000049 ... A0A0U4VSU8 38407413
    823211 8uu4:O (3.0) BS02 rna ? GO:0000049 ... A0A0U4VSU8 38407413
    823212 8uu4:P (3.0) BS01 rna ? GO:0003735 ... A0A0U4VSW3 38407413
    823213 8uu4:Q (3.0) BS01 rna ? GO:0003735 ... A0A0U5AR65 38407413
    823214 8uu4:Q (3.0) BS02 rna ? GO:0003735 ... A0A0U5AR65 38407413
    823215 8uu4:R (3.0) BS01 rna ? GO:0003735 ... A0A6B0JQF2 38407413
    823216 8uu4:R (3.0) BS02 rna ? GO:0003735 ... A0A6B0JQF2 38407413
    823217 8uu4:S (3.0) BS01 rna ? GO:0000027 ... A0A660JH71 38407413
    823218 8uu4:T (3.0) BS01 rna ? GO:0003723 ... A0A0U5AD18 38407413
    823219 8uu4:U (3.0) BS01 rna ? GO:0003735 ... A0A0U5ANW2 38407413
    823220 8uu4:V (3.0) BS01 rna ? GO:0000027 ... A0A0U4MTC5 38407413
    823221 8uu4:W (3.0) BS01 rna ? GO:0003723 ... A0A0U5AD05 38407413
    823222 8uu4:Y (3.0) BS01 rna ? GO:0003735 ... A0A660JMC7 38407413
    823223 8uu4:Y (3.0) BS02 rna ? GO:0003735 ... A0A660JMC7 38407413
    823224 8uu4:Z (3.0) BS01 rna ? GO:0003735 ... A0A660JJV9 38407413
    823225 8uu4:c (3.0) BS01 rna ? GO:0003676 ... A0A0U4VSU9 38407413
    823226 8uu4:e (3.0) BS01 rna ? GO:0003723 ... A0A0U4VSJ3 38407413
    823227 8uu4:f (3.0) BS01 rna ? GO:0003735 ... A0A7X0WKH5 38407413
    823228 8uu4:g (3.0) BS01 rna ? GO:0000028 ... A0A660JPE1 38407413
    823229 8uu4:h (3.0) BS01 rna ? GO:0003735 ... A0A0U5A6U3 38407413
    823230 8uu4:i (3.0) BS01 rna ? GO:0003723 ... A0A0U5ADS9 38407413
    823231 8uu4:j (3.0) BS01 rna ? GO:0000049 ... A0A0U5A730 38407413
    823232 8uu4:k (3.0) BS01 rna ? GO:0003735 ... A0A0U5AP31 38407413
    823233 8uu4:l (3.0) BS01 rna ? GO:0000049 ... A0A660JM56 38407413
    823234 8uu4:m (3.0) BS01 rna ? GO:0000049 ... A0A0U5ARJ0 38407413
    823235 8uu4:n (3.0) BS01 rna ? GO:0003735 ... A0A0U5AGZ1 38407413
    823236 8uu4:n (3.0) BS02 ZN ? GO:0003735 ... A0A0U5AGZ1 38407413
    823237 8uu4:o (3.0) BS01 rna ? GO:0003735 ... A0A660JLK4 38407413
    823238 8uu4:o (3.0) BS02 rna ? GO:0003735 ... A0A660JLK4 38407413
    823239 8uu4:p (3.0) BS01 rna ? GO:0003735 ... A0A6B0JQE1 38407413
    823240 8uu4:q (3.0) BS01 rna ? GO:0003735 ... A0A0U5ADR4 38407413
    823241 8uu4:r (3.0) BS01 rna ? GO:0003735 ... A0A660JK14 38407413
    823242 8uu4:s (3.0) BS01 rna ? GO:0000028 ... A0A0U4VSH5 38407413
    823243 8uu4:t (3.0) BS01 rna ? GO:0003723 ... A0A660JML5 38407413
    823244 8uu4:w (3.0) BS01 rna ? GO:0005737 ... A0A660JMK7 38407413
    823245 8uu5:1 (3.0) BS01 rna ? GO:0003735 ... A0A0U5AGL9 38407413
    823246 8uu5:2 (3.0) BS01 rna ? GO:0003735 ... A0A0U4VSJ1 38407413
    823247 8uu5:2 (3.0) BS02 rna ? GO:0003735 ... A0A0U4VSJ1 38407413
    823248 8uu5:3 (3.0) BS01 rna ? GO:0003735 ... A0A0U4MT39 38407413
    823249 8uu5:4 (3.0) BS01 rna ? GO:0003735 ... A0A660JNN0 38407413
    823250 8uu5:4 (3.0) BS02 ZN ? GO:0003735 ... A0A660JNN0 38407413
    823251 8uu5:5 (3.0) BS01 rna ? GO:0003735 ... A0A660JRA4 38407413
    823252 8uu5:5 (3.0) BS02 ZN ? GO:0003735 ... A0A660JRA4 38407413
    823253 8uu5:6 (3.0) BS01 rna ? GO:0003735 ... A0A660JKZ6 38407413
    823254 8uu5:7 (3.0) BS01 rna ? GO:0003735 ... A0A660JIB9 38407413
    823255 8uu5:8 (3.0) BS01 rna ? GO:0003735 ... A0A0U5AM58 38407413
    823256 8uu5:8 (3.0) BS02 ZN ? GO:0003735 ... A0A0U5AM58 38407413
    823257 8uu5:C (3.0) BS01 rna ? GO:0002181 ... A0A0U5A742 38407413
    823258 8uu5:C (3.0) BS02 MG ? GO:0002181 ... A0A0U5A742 38407413
    823259 8uu5:D (3.0) BS01 rna ? GO:0003735 ... A0A0U5ADD0 38407413
    823260 8uu5:E (3.0) BS01 rna ? GO:0003735 ... A0A0U4VSH7 38407413
    823261 8uu5:F (3.0) BS01 rna ? GO:0000049 ... A0A0U5AWX6 38407413
    823262 8uu5:F (3.0) BS02 rna ? GO:0000049 ... A0A0U5AWX6 38407413
    823263 8uu5:G (3.0) BS01 rna ? GO:0002181 ... A0A0U5ALU0 38407413
    823264 8uu5:L (3.0) BS01 rna ? GO:0003729 ... A0A0U5AGN0 38407413
    823265 8uu5:M (3.0) BS01 rna ? GO:0003735 ... A0A0U5AP82 38407413
    823266 8uu5:M (3.0) BS02 rna ? GO:0003735 ... A0A0U5AP82 38407413
    823267 8uu5:N (3.0) BS01 rna ? GO:0003735 ... A0A0U5A6S7 38407413
    823268 8uu5:O (3.0) BS01 rna ? GO:0000049 ... A0A0U4VSU8 38407413
    823269 8uu5:O (3.0) BS02 rna ? GO:0000049 ... A0A0U4VSU8 38407413
    823270 8uu5:P (3.0) BS01 rna ? GO:0003735 ... A0A0U4VSW3 38407413
    823271 8uu5:Q (3.0) BS01 rna ? GO:0003735 ... A0A0U5AR65 38407413
    823272 8uu5:Q (3.0) BS02 rna ? GO:0003735 ... A0A0U5AR65 38407413
    823273 8uu5:R (3.0) BS01 rna ? GO:0003735 ... A0A6B0JQF2 38407413
    823274 8uu5:R (3.0) BS02 rna ? GO:0003735 ... A0A6B0JQF2 38407413
    823275 8uu5:S (3.0) BS01 rna ? GO:0000027 ... A0A660JH71 38407413
    823276 8uu5:T (3.0) BS01 rna ? GO:0003723 ... A0A0U5AD18 38407413
    823277 8uu5:U (3.0) BS01 rna ? GO:0003735 ... A0A0U5ANW2 38407413
    823278 8uu5:V (3.0) BS01 rna ? GO:0000027 ... A0A0U4MTC5 38407413
    823279 8uu5:W (3.0) BS01 rna ? GO:0003723 ... A0A0U5AD05 38407413
    823280 8uu5:Y (3.0) BS01 rna ? GO:0003735 ... A0A660JMC7 38407413
    823281 8uu5:Z (3.0) BS01 rna ? GO:0003735 ... A0A660JJV9 38407413
    823282 8uu5:c (3.0) BS01 rna ? GO:0003676 ... A0A0U4VSU9 38407413
    823283 8uu5:e (3.0) BS01 rna ? GO:0003723 ... A0A0U4VSJ3 38407413
    823284 8uu5:f (3.0) BS01 rna ? GO:0003735 ... A0A7X0WKH5 38407413
    823285 8uu5:g (3.0) BS01 rna ? GO:0000028 ... A0A660JPE1 38407413
    823286 8uu5:h (3.0) BS01 rna ? GO:0003735 ... A0A0U5A6U3 38407413
    823287 8uu5:i (3.0) BS01 rna ? GO:0003723 ... A0A0U5ADS9 38407413
    823288 8uu5:i (3.0) BS02 rna ? GO:0003723 ... A0A0U5ADS9 38407413
    823289 8uu5:j (3.0) BS01 rna ? GO:0000049 ... A0A0U5A730 38407413
    823290 8uu5:k (3.0) BS01 rna ? GO:0003735 ... A0A0U5AP31 38407413
    823291 8uu5:l (3.0) BS01 rna ? GO:0000049 ... A0A660JM56 38407413
    823292 8uu5:m (3.0) BS01 rna ? GO:0000049 ... A0A0U5ARJ0 38407413
    823293 8uu5:m (3.0) BS02 MG ? GO:0000049 ... A0A0U5ARJ0 38407413
    823294 8uu5:n (3.0) BS01 rna ? GO:0003735 ... A0A0U5AGZ1 38407413
    823295 8uu5:n (3.0) BS02 ZN ? GO:0003735 ... A0A0U5AGZ1 38407413
    823296 8uu5:o (3.0) BS01 rna ? GO:0003735 ... A0A660JLK4 38407413
    823297 8uu5:o (3.0) BS02 rna ? GO:0003735 ... A0A660JLK4 38407413
    823298 8uu5:p (3.0) BS01 rna ? GO:0003735 ... A0A6B0JQE1 38407413
    823299 8uu5:q (3.0) BS01 rna ? GO:0003735 ... A0A0U5ADR4 38407413
    823300 8uu5:r (3.0) BS01 rna ? GO:0003735 ... A0A660JK14 38407413
    823301 8uu5:s (3.0) BS01 rna ? GO:0000028 ... A0A0U4VSH5 38407413
    823302 8uu5:t (3.0) BS01 rna ? GO:0003723 ... A0A660JML5 38407413
    823303 8uu5:t (3.0) BS02 MG ? GO:0003723 ... A0A660JML5 38407413
    823304 8uu6:1 (3.3) BS01 rna ? GO:0003735 ... A0A0U5AGL9 38407413
    823305 8uu6:2 (3.3) BS01 rna ? GO:0003735 ... A0A0U4VSJ1 38407413
    823306 8uu6:3 (3.3) BS01 rna ? GO:0003735 ... A0A0U4MT39 38407413
    823307 8uu6:4 (3.3) BS01 rna ? GO:0003735 ... A0A660JNN0 38407413
    823308 8uu6:4 (3.3) BS02 ZN ? GO:0003735 ... A0A660JNN0 38407413
    823309 8uu6:5 (3.3) BS01 rna ? GO:0003735 ... A0A660JRA4 38407413
    823310 8uu6:5 (3.3) BS02 ZN ? GO:0003735 ... A0A660JRA4 38407413
    823311 8uu6:6 (3.3) BS01 rna ? GO:0003735 ... A0A660JKZ6 38407413
    823312 8uu6:7 (3.3) BS01 rna ? GO:0003735 ... A0A660JIB9 38407413
    823313 8uu6:8 (3.3) BS01 rna ? GO:0003735 ... A0A0U5AM58 38407413
    823314 8uu6:8 (3.3) BS02 ZN ? GO:0003735 ... A0A0U5AM58 38407413
    823315 8uu6:C (3.3) BS01 rna ? GO:0002181 ... A0A0U5A742 38407413
    823316 8uu6:C (3.3) BS02 rna ? GO:0002181 ... A0A0U5A742 38407413
    823317 8uu6:D (3.3) BS01 rna ? GO:0003735 ... A0A0U5ADD0 38407413
    823318 8uu6:E (3.3) BS01 rna ? GO:0003735 ... A0A0U4VSH7 38407413
    823319 8uu6:F (3.3) BS01 rna ? GO:0000049 ... A0A0U5AWX6 38407413
    823320 8uu6:F (3.3) BS02 rna ? GO:0000049 ... A0A0U5AWX6 38407413
    823321 8uu6:G (3.3) BS01 rna ? GO:0002181 ... A0A0U5ALU0 38407413
    823322 8uu6:L (3.3) BS01 rna ? GO:0003729 ... A0A0U5AGN0 38407413
    823323 8uu6:M (3.3) BS01 rna ? GO:0003735 ... A0A0U5AP82 38407413
    823324 8uu6:N (3.3) BS01 rna ? GO:0003735 ... A0A0U5A6S7 38407413
    823325 8uu6:O (3.3) BS01 rna ? GO:0000049 ... A0A0U4VSU8 38407413
    823326 8uu6:P (3.3) BS01 rna ? GO:0003735 ... A0A0U4VSW3 38407413
    823327 8uu6:Q (3.3) BS01 rna ? GO:0003735 ... A0A0U5AR65 38407413
    823328 8uu6:Q (3.3) BS02 rna ? GO:0003735 ... A0A0U5AR65 38407413
    823329 8uu6:R (3.3) BS01 rna ? GO:0003735 ... A0A6B0JQF2 38407413
    823330 8uu6:S (3.3) BS01 rna ? GO:0000027 ... A0A660JH71 38407413
    823331 8uu6:T (3.3) BS01 rna ? GO:0003723 ... A0A0U5AD18 38407413
    823332 8uu6:U (3.3) BS01 rna ? GO:0003735 ... A0A0U5ANW2 38407413
    823333 8uu6:V (3.3) BS01 rna ? GO:0000027 ... A0A0U4MTC5 38407413
    823334 8uu6:W (3.3) BS01 rna ? GO:0003723 ... A0A0U5AD05 38407413
    823335 8uu6:Y (3.3) BS01 rna ? GO:0003735 ... A0A660JMC7 38407413
    823336 8uu6:Z (3.3) BS01 rna ? GO:0003735 ... A0A660JJV9 38407413
    823337 8uu6:c (3.3) BS01 rna ? GO:0003676 ... A0A0U4VSU9 38407413
    823338 8uu6:e (3.3) BS01 rna ? GO:0003723 ... A0A0U4VSJ3 38407413
    823339 8uu6:f (3.3) BS01 rna ? GO:0003735 ... A0A7X0WKH5 38407413
    823340 8uu6:g (3.3) BS01 rna ? GO:0000028 ... A0A660JPE1 38407413
    823341 8uu6:h (3.3) BS01 rna ? GO:0003735 ... A0A0U5A6U3 38407413
    823342 8uu6:i (3.3) BS01 rna ? GO:0003723 ... A0A0U5ADS9 38407413
    823343 8uu6:j (3.3) BS01 rna ? GO:0000049 ... A0A0U5A730 38407413
    823344 8uu6:k (3.3) BS01 rna ? GO:0003735 ... A0A0U5AP31 38407413
    823345 8uu6:l (3.3) BS01 rna ? GO:0000049 ... A0A660JM56 38407413
    823346 8uu6:m (3.3) BS01 rna ? GO:0000049 ... A0A0U5ARJ0 38407413
    823347 8uu6:n (3.3) BS01 rna ? GO:0003735 ... A0A0U5AGZ1 38407413
    823348 8uu6:n (3.3) BS02 ZN ? GO:0003735 ... A0A0U5AGZ1 38407413
    823349 8uu6:o (3.3) BS01 rna ? GO:0003735 ... A0A660JLK4 38407413
    823350 8uu6:o (3.3) BS02 rna ? GO:0003735 ... A0A660JLK4 38407413
    823351 8uu6:p (3.3) BS01 rna ? GO:0003735 ... A0A6B0JQE1 38407413
    823352 8uu6:q (3.3) BS01 rna ? GO:0003735 ... A0A0U5ADR4 38407413
    823353 8uu6:q (3.3) BS02 MG ? GO:0003735 ... A0A0U5ADR4 38407413
    823354 8uu6:r (3.3) BS01 rna ? GO:0003735 ... A0A660JK14 38407413
    823355 8uu6:s (3.3) BS01 rna ? GO:0000028 ... A0A0U4VSH5 38407413
    823356 8uu6:t (3.3) BS01 rna ? GO:0003723 ... A0A660JML5 38407413
    823357 8uu7:1 (3.2) BS01 rna ? GO:0003735 ... A0A0U5AGL9 38407413
    823358 8uu7:2 (3.2) BS01 rna ? GO:0003735 ... A0A0U4VSJ1 38407413
    823359 8uu7:3 (3.2) BS01 rna ? GO:0003735 ... A0A0U4MT39 38407413
    823360 8uu7:4 (3.2) BS01 rna ? GO:0003735 ... A0A660JNN0 38407413
    823361 8uu7:4 (3.2) BS02 ZN ? GO:0003735 ... A0A660JNN0 38407413
    823362 8uu7:5 (3.2) BS01 rna ? GO:0003735 ... A0A660JRA4 38407413
    823363 8uu7:5 (3.2) BS02 ZN ? GO:0003735 ... A0A660JRA4 38407413
    823364 8uu7:6 (3.2) BS01 rna ? GO:0003735 ... A0A660JKZ6 38407413
    823365 8uu7:7 (3.2) BS01 rna ? GO:0003735 ... A0A660JIB9 38407413
    823366 8uu7:8 (3.2) BS01 rna ? GO:0003735 ... A0A0U5AM58 38407413
    823367 8uu7:8 (3.2) BS02 ZN ? GO:0003735 ... A0A0U5AM58 38407413
    823368 8uu7:C (3.2) BS01 rna ? GO:0002181 ... A0A0U5A742 38407413
    823369 8uu7:D (3.2) BS01 rna ? GO:0003735 ... A0A0U5ADD0 38407413
    823370 8uu7:E (3.2) BS01 rna ? GO:0003735 ... A0A0U4VSH7 38407413
    823371 8uu7:F (3.2) BS01 rna ? GO:0000049 ... A0A0U5AWX6 38407413
    823372 8uu7:F (3.2) BS02 rna ? GO:0000049 ... A0A0U5AWX6 38407413
    823373 8uu7:G (3.2) BS01 rna ? GO:0002181 ... A0A0U5ALU0 38407413
    823374 8uu7:L (3.2) BS01 rna ? GO:0003729 ... A0A0U5AGN0 38407413
    823375 8uu7:M (3.2) BS01 rna ? GO:0003735 ... A0A0U5AP82 38407413
    823376 8uu7:M (3.2) BS02 rna ? GO:0003735 ... A0A0U5AP82 38407413
    823377 8uu7:N (3.2) BS01 rna ? GO:0003735 ... A0A0U5A6S7 38407413
    823378 8uu7:O (3.2) BS01 rna ? GO:0000049 ... A0A0U4VSU8 38407413
    823379 8uu7:P (3.2) BS01 rna ? GO:0003735 ... A0A0U4VSW3 38407413
    823380 8uu7:Q (3.2) BS01 rna ? GO:0003735 ... A0A0U5AR65 38407413
    823381 8uu7:Q (3.2) BS02 rna ? GO:0003735 ... A0A0U5AR65 38407413
    823382 8uu7:R (3.2) BS01 rna ? GO:0003735 ... A0A6B0JQF2 38407413
    823383 8uu7:R (3.2) BS02 rna ? GO:0003735 ... A0A6B0JQF2 38407413
    823384 8uu7:S (3.2) BS01 rna ? GO:0000027 ... A0A660JH71 38407413
    823385 8uu7:T (3.2) BS01 rna ? GO:0003723 ... A0A0U5AD18 38407413
    823386 8uu7:U (3.2) BS01 rna ? GO:0003735 ... A0A0U5ANW2 38407413
    823387 8uu7:V (3.2) BS01 rna ? GO:0000027 ... A0A0U4MTC5 38407413
    823388 8uu7:W (3.2) BS01 rna ? GO:0003723 ... A0A0U5AD05 38407413
    823389 8uu7:Y (3.2) BS01 rna ? GO:0003735 ... A0A660JMC7 38407413
    823390 8uu7:Y (3.2) BS02 rna ? GO:0003735 ... A0A660JMC7 38407413
    823391 8uu7:Z (3.2) BS01 rna ? GO:0003735 ... A0A660JJV9 38407413
    823392 8uu7:c (3.2) BS01 rna ? GO:0003676 ... A0A0U4VSU9 38407413
    823393 8uu7:e (3.2) BS01 rna ? GO:0003723 ... A0A0U4VSJ3 38407413
    823394 8uu7:f (3.2) BS01 rna ? GO:0003735 ... A0A7X0WKH5 38407413
    823395 8uu7:g (3.2) BS01 rna ? GO:0000028 ... A0A660JPE1 38407413
    823396 8uu7:g (3.2) BS02 rna ? GO:0000028 ... A0A660JPE1 38407413
    823397 8uu7:h (3.2) BS01 rna ? GO:0003735 ... A0A0U5A6U3 38407413
    823398 8uu7:i (3.2) BS01 rna ? GO:0003723 ... A0A0U5ADS9 38407413
    823399 8uu7:j (3.2) BS01 rna ? GO:0000049 ... A0A0U5A730 38407413
    823400 8uu7:j (3.2) BS02 MG ? GO:0000049 ... A0A0U5A730 38407413
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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