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BioLiP
Download all results in tab-seperated text for 69 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 6kig:e (2.9) BS01 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    2 6kig:e (2.9) BS02 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    3 6kig:e (2.9) BS03 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    4 6kig:e (2.9) BS04 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    5 6kig:e (2.9) BS05 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    6 6kig:e (2.9) BS06 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    7 6kig:e (2.9) BS07 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    8 6kig:e (2.9) BS08 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    9 6kig:e (2.9) BS09 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    10 6kig:e (2.9) BS10 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    11 6kig:e (2.9) BS11 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    12 6kig:e (2.9) BS12 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    13 6kig:e (2.9) BS13 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    14 6kig:e (2.9) BS14 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    15 6kig:e (2.9) BS15 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    16 6kig:e (2.9) BS16 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    17 6kig:e (2.9) BS17 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    18 6kig:e (2.9) BS18 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    19 6kig:e (2.9) BS19 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    20 6kig:e (2.9) BS20 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    21 6kig:e (2.9) BS21 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    22 6kig:e (2.9) BS22 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    23 6kig:e (2.9) BS23 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    24 6kig:e (2.9) BS24 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    25 6kig:e (2.9) BS25 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    26 6kig:e (2.9) BS26 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    27 6kig:e (2.9) BS27 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    28 6kig:e (2.9) BS28 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    29 6kig:e (2.9) BS29 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    30 6kig:e (2.9) BS30 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    31 6kig:e (2.9) BS31 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    32 6kig:e (2.9) BS32 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    33 6kig:e (2.9) BS33 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    34 6kig:e (2.9) BS34 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    35 6kig:e (2.9) BS35 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    36 6kig:e (2.9) BS36 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    37 6kig:e (2.9) BS37 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    38 6kig:e (2.9) BS38 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    39 6kig:e (2.9) BS39 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    40 6kig:e (2.9) BS40 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    41 6kig:e (2.9) BS41 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    42 6kig:e (2.9) BS42 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    43 6kig:e (2.9) BS43 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    44 6kig:e (2.9) BS44 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    45 6kig:e (2.9) BS45 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    46 6kig:e (2.9) BS46 PQN 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    47 6kig:e (2.9) BS47 SF4 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    48 6kig:e (2.9) BS48 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    49 6kig:e (2.9) BS49 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    50 6kig:e (2.9) BS50 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    51 6kig:e (2.9) BS51 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    52 6kig:e (2.9) BS52 CLA 1.97.1.12 GO:0000287 ... Q31LJ0 32042157
    53 6kig:f (2.9) BS02 CLA 1.97.1.12 GO:0000287 ... Q31LJ1 32042157
    54 6kig:f (2.9) BS03 CLA 1.97.1.12 GO:0000287 ... Q31LJ1 32042157
    55 6kig:f (2.9) BS04 CLA 1.97.1.12 GO:0000287 ... Q31LJ1 32042157
    56 6kig:f (2.9) BS05 CLA 1.97.1.12 GO:0000287 ... Q31LJ1 32042157
    57 6kig:f (2.9) BS06 CLA 1.97.1.12 GO:0000287 ... Q31LJ1 32042157
    58 6kig:f (2.9) BS07 CLA 1.97.1.12 GO:0000287 ... Q31LJ1 32042157
    59 6kig:f (2.9) BS08 SF4 1.97.1.12 GO:0000287 ... Q31LJ1 32042157
    60 6kig:j (2.9) BS01 CLA ? GO:0009522 ... Q31NT9 32042157
    61 6kig:j (2.9) BS02 CLA ? GO:0009522 ... Q31NT9 32042157
    62 6kig:l (2.9) BS01 CLA ? GO:0009522 ... Q31NU0 32042157
    63 6kig:m (2.9) BS01 CLA ? GO:0009522 ... Q31PR9 32042157
    64 6kig:m (2.9) BS02 CLA ? GO:0009522 ... Q31PR9 32042157
    65 6kig:m (2.9) BS03 CLA ? GO:0009522 ... Q31PR9 32042157
    66 6kig:n (2.9) BS02 CLA ? GO:0009522 ... P95822 32042157
    67 6kig:n (2.9) BS03 CLA ? GO:0009522 ... P95822 32042157
    68 6kig:n (2.9) BS04 CLA ? GO:0009522 ... P95822 32042157
    69 6kig:n (2.9) BS05 CLA ? GO:0009522 ... P95822 32042157
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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