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BioLiP
Download all results in tab-seperated text for 73 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7y7b:A (2.66) BS48 SF4 1.97.1.12 GO:0000287 ... A0A222AIB4 36943796
    2 7y7b:A (2.66) BS49 CLA 1.97.1.12 GO:0000287 ... A0A222AIB4 36943796
    3 7y7b:A (2.66) BS50 CLA 1.97.1.12 GO:0000287 ... A0A222AIB4 36943796
    4 7y7b:A (2.66) BS51 CLA 1.97.1.12 GO:0000287 ... A0A222AIB4 36943796
    5 7y7b:B (2.66) BS01 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    6 7y7b:B (2.66) BS02 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    7 7y7b:B (2.66) BS03 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    8 7y7b:B (2.66) BS04 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    9 7y7b:B (2.66) BS05 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    10 7y7b:B (2.66) BS06 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    11 7y7b:B (2.66) BS07 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    12 7y7b:B (2.66) BS08 SF4 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    13 7y7b:B (2.66) BS09 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    14 7y7b:B (2.66) BS10 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    15 7y7b:B (2.66) BS11 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    16 7y7b:B (2.66) BS12 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    17 7y7b:B (2.66) BS13 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    18 7y7b:B (2.66) BS14 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    19 7y7b:B (2.66) BS15 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    20 7y7b:B (2.66) BS16 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    21 7y7b:B (2.66) BS17 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    22 7y7b:B (2.66) BS18 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    23 7y7b:B (2.66) BS19 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    24 7y7b:B (2.66) BS20 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    25 7y7b:B (2.66) BS21 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    26 7y7b:B (2.66) BS22 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    27 7y7b:B (2.66) BS23 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    28 7y7b:B (2.66) BS24 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    29 7y7b:B (2.66) BS25 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    30 7y7b:B (2.66) BS26 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    31 7y7b:B (2.66) BS27 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    32 7y7b:B (2.66) BS28 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    33 7y7b:B (2.66) BS29 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    34 7y7b:B (2.66) BS30 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    35 7y7b:B (2.66) BS31 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    36 7y7b:B (2.66) BS32 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    37 7y7b:B (2.66) BS33 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    38 7y7b:B (2.66) BS34 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    39 7y7b:B (2.66) BS35 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    40 7y7b:B (2.66) BS36 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    41 7y7b:B (2.66) BS37 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    42 7y7b:B (2.66) BS38 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    43 7y7b:B (2.66) BS39 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    44 7y7b:B (2.66) BS40 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    45 7y7b:B (2.66) BS41 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    46 7y7b:B (2.66) BS42 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    47 7y7b:B (2.66) BS43 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    48 7y7b:B (2.66) BS44 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    49 7y7b:B (2.66) BS45 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    50 7y7b:B (2.66) BS46 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    51 7y7b:B (2.66) BS47 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    52 7y7b:B (2.66) BS48 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    53 7y7b:B (2.66) BS49 PQN 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    54 7y7b:B (2.66) BS50 II0 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    55 7y7b:B (2.66) BS51 8CT 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    56 7y7b:B (2.66) BS52 8CT 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    57 7y7b:B (2.66) BS53 8CT 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    58 7y7b:B (2.66) BS54 8CT 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    59 7y7b:B (2.66) BS55 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    60 7y7b:B (2.66) BS56 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    61 7y7b:B (2.66) BS57 CLA 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    62 7y7b:B (2.66) BS58 8CT 1.97.1.12 GO:0000287 ... A0A222AI95 36943796
    63 7y7b:F (2.66) BS02 CLA ? GO:0009522 ... A0A222AI52 36943796
    64 7y7b:F (2.66) BS03 CLA ? GO:0009522 ... A0A222AI52 36943796
    65 7y7b:F (2.66) BS04 CLA ? GO:0009522 ... A0A222AI52 36943796
    66 7y7b:F (2.66) BS05 8CT ? GO:0009522 ... A0A222AI52 36943796
    67 7y7b:I (2.66) BS03 CLA ? GO:0009522 ... A0A222AI78 36943796
    68 7y7b:I (2.66) BS04 CLA ? GO:0009522 ... A0A222AI78 36943796
    69 7y7b:J (2.66) BS04 CLA ? GO:0009522 ... A0A222AI55 36943796
    70 7y7b:M (2.66) BS01 CLA ? GO:0009522 ... A0A222AI28 36943796
    71 7y7b:R (2.66) BS01 CLA N/A N/A N/A 36943796
    72 7y7b:R (2.66) BS02 CLA N/A N/A N/A 36943796
    73 7y7b:R (2.66) BS03 CLA N/A N/A N/A 36943796
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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