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BioLiP
Download all results in tab-seperated text for 66 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7zqd:32 (2.97) BS01 CLA N/A GO:0009765 ... N/A 36229605
    2 7zqd:32 (2.97) BS02 CLA N/A GO:0009765 ... N/A 36229605
    3 7zqd:32 (2.97) BS03 CLA N/A GO:0009765 ... N/A 36229605
    4 7zqd:A2 (2.97) BS01 CL0 1.97.1.12 GO:0000287 ... P12154 36229605
    5 7zqd:A2 (2.97) BS02 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    6 7zqd:A2 (2.97) BS03 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    7 7zqd:A2 (2.97) BS04 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    8 7zqd:A2 (2.97) BS05 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    9 7zqd:A2 (2.97) BS06 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    10 7zqd:A2 (2.97) BS07 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    11 7zqd:A2 (2.97) BS08 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    12 7zqd:A2 (2.97) BS09 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    13 7zqd:A2 (2.97) BS10 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    14 7zqd:A2 (2.97) BS11 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    15 7zqd:A2 (2.97) BS12 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    16 7zqd:A2 (2.97) BS13 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    17 7zqd:A2 (2.97) BS14 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    18 7zqd:A2 (2.97) BS15 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    19 7zqd:A2 (2.97) BS16 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    20 7zqd:A2 (2.97) BS17 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    21 7zqd:A2 (2.97) BS18 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    22 7zqd:A2 (2.97) BS19 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    23 7zqd:A2 (2.97) BS20 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    24 7zqd:A2 (2.97) BS21 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    25 7zqd:A2 (2.97) BS22 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    26 7zqd:A2 (2.97) BS23 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    27 7zqd:A2 (2.97) BS24 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    28 7zqd:A2 (2.97) BS25 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    29 7zqd:A2 (2.97) BS26 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    30 7zqd:A2 (2.97) BS27 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    31 7zqd:A2 (2.97) BS28 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    32 7zqd:A2 (2.97) BS29 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    33 7zqd:A2 (2.97) BS30 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    34 7zqd:A2 (2.97) BS31 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    35 7zqd:A2 (2.97) BS32 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    36 7zqd:A2 (2.97) BS33 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    37 7zqd:A2 (2.97) BS34 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    38 7zqd:A2 (2.97) BS35 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    39 7zqd:A2 (2.97) BS36 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    40 7zqd:A2 (2.97) BS37 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    41 7zqd:A2 (2.97) BS38 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    42 7zqd:A2 (2.97) BS39 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    43 7zqd:A2 (2.97) BS40 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    44 7zqd:A2 (2.97) BS41 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    45 7zqd:A2 (2.97) BS42 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    46 7zqd:A2 (2.97) BS43 PQN 1.97.1.12 GO:0000287 ... P12154 36229605
    47 7zqd:A2 (2.97) BS44 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    48 7zqd:A2 (2.97) BS45 SF4 1.97.1.12 GO:0000287 ... P12154 36229605
    49 7zqd:A2 (2.97) BS46 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    50 7zqd:A2 (2.97) BS47 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    51 7zqd:A2 (2.97) BS48 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    52 7zqd:A2 (2.97) BS49 CLA 1.97.1.12 GO:0000287 ... P12154 36229605
    53 7zqd:B2 (2.97) BS01 CL0 1.97.1.12 GO:0000287 ... P09144 36229605
    54 7zqd:B2 (2.97) BS02 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    55 7zqd:B2 (2.97) BS03 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    56 7zqd:B2 (2.97) BS04 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    57 7zqd:B2 (2.97) BS05 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    58 7zqd:B2 (2.97) BS06 SF4 1.97.1.12 GO:0000287 ... P09144 36229605
    59 7zqd:B2 (2.97) BS07 CLA 1.97.1.12 GO:0000287 ... P09144 36229605
    60 7zqd:J2 (2.97) BS01 CLA ? GO:0009507 ... P59777 36229605
    61 7zqd:K2 (2.97) BS01 CLA ? GO:0009507 ... P14225 36229605
    62 7zqd:K2 (2.97) BS02 CLA ? GO:0009507 ... P14225 36229605
    63 7zqd:K2 (2.97) BS03 CLA ? GO:0009507 ... P14225 36229605
    64 7zqd:L2 (2.97) BS01 CLA ? GO:0009522 ... A8IL32 36229605
    65 7zqd:L2 (2.97) BS02 CLA ? GO:0009522 ... A8IL32 36229605
    66 7zqd:L2 (2.97) BS03 CLA ? GO:0009522 ... A8IL32 36229605
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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