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BioLiP
Download all results in tab-seperated text for 23 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 7wyi:A (3.9) BS01 CL0 1.97.1.12 GO:0000287 ... P12154 37270022
    2 7wyi:A (3.9) BS02 CLA 1.97.1.12 GO:0000287 ... P12154 37270022
    3 7wyi:A (3.9) BS03 CLA 1.97.1.12 GO:0000287 ... P12154 37270022
    4 7wyi:A (3.9) BS04 CLA 1.97.1.12 GO:0000287 ... P12154 37270022
    5 7wyi:A (3.9) BS05 CLA 1.97.1.12 GO:0000287 ... P12154 37270022
    6 7wyi:A (3.9) BS06 CLA 1.97.1.12 GO:0000287 ... P12154 37270022
    7 7wyi:A (3.9) BS07 CLA 1.97.1.12 GO:0000287 ... P12154 37270022
    8 7wyi:A (3.9) BS08 CLA 1.97.1.12 GO:0000287 ... P12154 37270022
    9 7wyi:A (3.9) BS09 CLA 1.97.1.12 GO:0000287 ... P12154 37270022
    10 7wyi:A (3.9) BS10 CLA 1.97.1.12 GO:0000287 ... P12154 37270022
    11 7wyi:A (3.9) BS11 CLA 1.97.1.12 GO:0000287 ... P12154 37270022
    12 7wyi:A (3.9) BS12 CLA 1.97.1.12 GO:0000287 ... P12154 37270022
    13 7wyi:A (3.9) BS13 CLA 1.97.1.12 GO:0000287 ... P12154 37270022
    14 7wyi:A (3.9) BS14 CLA 1.97.1.12 GO:0000287 ... P12154 37270022
    15 7wyi:A (3.9) BS15 CLA 1.97.1.12 GO:0000287 ... P12154 37270022
    16 7wyi:A (3.9) BS16 CLA 1.97.1.12 GO:0000287 ... P12154 37270022
    17 7wyi:A (3.9) BS17 CLA 1.97.1.12 GO:0000287 ... P12154 37270022
    18 7wyi:A (3.9) BS18 CLA 1.97.1.12 GO:0000287 ... P12154 37270022
    19 7wyi:A (3.9) BS19 PQN 1.97.1.12 GO:0000287 ... P12154 37270022
    20 7wyi:A (3.9) BS20 CLA 1.97.1.12 GO:0000287 ... P12154 37270022
    21 7wyi:A (3.9) BS21 CLA 1.97.1.12 GO:0000287 ... P12154 37270022
    22 7wyi:A (3.9) BS22 CLA 1.97.1.12 GO:0000287 ... P12154 37270022
    23 7wyi:A (3.9) BS23 SF4 1.97.1.12 GO:0000287 ... P12154 37270022
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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