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BioLiP
Download all results in tab-seperated text for 54 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 6rhz:3 (3.2) BS17 CLA ? GO:0009765 ... C1K004 32123351
    2 6rhz:3 (3.2) BS18 CLA ? GO:0009765 ... C1K004 32123351
    3 6rhz:A (3.2) BS01 CL0 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    4 6rhz:A (3.2) BS02 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    5 6rhz:A (3.2) BS03 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    6 6rhz:A (3.2) BS04 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    7 6rhz:A (3.2) BS05 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    8 6rhz:A (3.2) BS06 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    9 6rhz:A (3.2) BS07 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    10 6rhz:A (3.2) BS08 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    11 6rhz:A (3.2) BS09 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    12 6rhz:A (3.2) BS10 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    13 6rhz:A (3.2) BS11 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    14 6rhz:A (3.2) BS12 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    15 6rhz:A (3.2) BS13 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    16 6rhz:A (3.2) BS14 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    17 6rhz:A (3.2) BS15 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    18 6rhz:A (3.2) BS16 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    19 6rhz:A (3.2) BS17 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    20 6rhz:A (3.2) BS18 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    21 6rhz:A (3.2) BS19 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    22 6rhz:A (3.2) BS20 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    23 6rhz:A (3.2) BS21 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    24 6rhz:A (3.2) BS22 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    25 6rhz:A (3.2) BS23 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    26 6rhz:A (3.2) BS24 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    27 6rhz:A (3.2) BS25 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    28 6rhz:A (3.2) BS26 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    29 6rhz:A (3.2) BS27 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    30 6rhz:A (3.2) BS28 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    31 6rhz:A (3.2) BS29 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    32 6rhz:A (3.2) BS30 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    33 6rhz:A (3.2) BS31 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    34 6rhz:A (3.2) BS32 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    35 6rhz:A (3.2) BS33 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    36 6rhz:A (3.2) BS34 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    37 6rhz:A (3.2) BS35 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    38 6rhz:A (3.2) BS36 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    39 6rhz:A (3.2) BS37 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    40 6rhz:A (3.2) BS38 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    41 6rhz:A (3.2) BS39 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    42 6rhz:A (3.2) BS40 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    43 6rhz:A (3.2) BS41 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    44 6rhz:A (3.2) BS42 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    45 6rhz:A (3.2) BS43 PQN 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    46 6rhz:A (3.2) BS44 SF4 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    47 6rhz:A (3.2) BS45 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    48 6rhz:A (3.2) BS46 CLA 1.97.1.12 GO:0000287 ... D0FXV2 32123351
    49 6rhz:B (3.2) BS01 CLA 1.97.1.12 GO:0000287 ... D0FXZ0 32123351
    50 6rhz:B (3.2) BS02 CLA 1.97.1.12 GO:0000287 ... D0FXZ0 32123351
    51 6rhz:B (3.2) BS03 CLA 1.97.1.12 GO:0000287 ... D0FXZ0 32123351
    52 6rhz:B (3.2) BS04 SF4 1.97.1.12 GO:0000287 ... D0FXZ0 32123351
    53 6rhz:F (3.2) BS02 CLA N/A GO:0009522 ... N/A 32123351
    54 6rhz:J (3.2) BS01 CLA ? GO:0009507 ... D0FXW0 32123351
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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