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BioLiP
Download all results in tab-seperated text for 66 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
  • Click Site # to view the binding site structure. Hover over Site # to view the binding residues.
  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1 5oy0:0 (2.501) BS01 CLA ? GO:0005886 ... P37277 29414678
    2 5oy0:0 (2.501) BS02 CLA ? GO:0005886 ... P37277 29414678
    3 5oy0:0 (2.501) BS03 CLA ? GO:0005886 ... P37277 29414678
    4 5oy0:1 (2.501) BS01 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    5 5oy0:1 (2.501) BS02 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    6 5oy0:1 (2.501) BS03 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    7 5oy0:1 (2.501) BS04 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    8 5oy0:1 (2.501) BS05 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    9 5oy0:1 (2.501) BS06 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    10 5oy0:1 (2.501) BS07 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    11 5oy0:1 (2.501) BS08 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    12 5oy0:1 (2.501) BS09 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    13 5oy0:1 (2.501) BS10 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    14 5oy0:1 (2.501) BS11 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    15 5oy0:1 (2.501) BS12 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    16 5oy0:1 (2.501) BS13 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    17 5oy0:1 (2.501) BS14 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    18 5oy0:1 (2.501) BS15 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    19 5oy0:1 (2.501) BS16 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    20 5oy0:1 (2.501) BS17 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    21 5oy0:1 (2.501) BS18 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    22 5oy0:1 (2.501) BS19 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    23 5oy0:1 (2.501) BS20 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    24 5oy0:1 (2.501) BS21 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    25 5oy0:1 (2.501) BS22 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    26 5oy0:1 (2.501) BS23 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    27 5oy0:1 (2.501) BS24 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    28 5oy0:1 (2.501) BS25 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    29 5oy0:1 (2.501) BS26 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    30 5oy0:1 (2.501) BS27 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    31 5oy0:1 (2.501) BS28 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    32 5oy0:1 (2.501) BS29 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    33 5oy0:1 (2.501) BS30 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    34 5oy0:1 (2.501) BS31 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    35 5oy0:1 (2.501) BS32 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    36 5oy0:1 (2.501) BS33 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    37 5oy0:1 (2.501) BS34 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    38 5oy0:1 (2.501) BS35 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    39 5oy0:1 (2.501) BS36 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    40 5oy0:1 (2.501) BS37 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    41 5oy0:1 (2.501) BS38 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    42 5oy0:1 (2.501) BS39 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    43 5oy0:1 (2.501) BS40 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    44 5oy0:1 (2.501) BS41 PQN 1.97.1.12 GO:0000287 ... P29254 29414678
    45 5oy0:1 (2.501) BS42 SF4 1.97.1.12 GO:0000287 ... P29254 29414678
    46 5oy0:1 (2.501) BS43 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    47 5oy0:1 (2.501) BS44 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    48 5oy0:1 (2.501) BS45 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    49 5oy0:1 (2.501) BS46 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    50 5oy0:1 (2.501) BS47 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    51 5oy0:1 (2.501) BS48 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    52 5oy0:1 (2.501) BS49 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    53 5oy0:1 (2.501) BS50 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    54 5oy0:1 (2.501) BS51 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    55 5oy0:1 (2.501) BS52 CLA 1.97.1.12 GO:0000287 ... P29254 29414678
    56 5oy0:2 (2.501) BS01 CLA 1.97.1.12 GO:0000287 ... P29255 29414678
    57 5oy0:2 (2.501) BS02 CLA 1.97.1.12 GO:0000287 ... P29255 29414678
    58 5oy0:2 (2.501) BS03 CLA 1.97.1.12 GO:0000287 ... P29255 29414678
    59 5oy0:2 (2.501) BS04 SF4 1.97.1.12 GO:0000287 ... P29255 29414678
    60 5oy0:2 (2.501) BS05 CLA 1.97.1.12 GO:0000287 ... P29255 29414678
    61 5oy0:2 (2.501) BS06 CLA 1.97.1.12 GO:0000287 ... P29255 29414678
    62 5oy0:6 (2.501) BS01 CLA ? GO:0009522 ... P29256 29414678
    63 5oy0:7 (2.501) BS01 CLA ? GO:0009522 ... Q55329 29414678
    64 5oy0:7 (2.501) BS02 CLA ? GO:0009522 ... Q55329 29414678
    65 5oy0:8 (2.501) BS01 CLA ? GO:0009522 ... P74564 29414678
    66 5oy0:8 (2.501) BS02 CLA ? GO:0009522 ... P74564 29414678
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023)(download the PDF file).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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