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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1601 1mdm:B (2.8) BS02 dna ? GO:0003700 ... P27577 12221090 PDBbind: Kd=35pM
    1602 1me3:A (1.2) BS01 P10 3.4.22.51 GO:0006508 ... P25779 12467703 PDBbind: -logKd/Ki=7.19, Ki=64.6nM
    1603 1me4:A (1.2) BS01 T10 3.4.22.51 GO:0006508 ... P25779 12467703 PDBbind: -logKd/Ki=6.84, Ki=146nM
    1604 1me7:A (2.15) BS01 RVP 1.1.1.205 GO:0000166 ... P50097 12235158 MOAD: Ki=65nM
    PDBbind: -logKd/Ki=7.19, Ki=65nM
    1605 1me8:A (1.9) BS01 RVP 1.1.1.205 GO:0000166 ... P50097 12235158 MOAD: Ki=65nM
    PDBbind: -logKd/Ki=7.19, Ki=65nM
    1606 1mem:A (1.8) BS01 0D6 3.4.22.38 GO:0006508 ... P43235 9033587 PDBbind: -logKd/Ki=7.94, Ki=11.5nM
    1607 1mes:A (1.9) BS01 DMP 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 9048541 PDBbind: -logKd/Ki=7.70, Ki=20nM
    1608 1mes:B (1.9) BS01 DMP 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 9048541 MOAD: Ki=20nM
    PDBbind: -logKd/Ki=7.70, Ki=20nM
    1609 1met:A (1.9) BS01 DMP 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 9048541 MOAD: Ki=0.4nM
    PDBbind: -logKd/Ki=9.40, Ki=0.4nM
    1610 1met:B (1.9) BS01 DMP 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 9048541 PDBbind: -logKd/Ki=9.40, Ki=0.4nM
    1611 1meu:A (1.9) BS01 DMP 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 9048541 MOAD: Ki=0.8uM
    PDBbind: -logKd/Ki=6.10, Ki=0.8uM
    1612 1meu:B (1.9) BS01 DMP 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 9048541 PDBbind: -logKd/Ki=6.10, Ki=0.8uM
    1613 1mfa:L (1.7) BS01 ABE N/A N/A N/A 7517550 PDBbind: -logKd/Ki=5.04, Kd=9.1uM
    1614 1mfd:H (2.1) BS01 MMA N/A N/A N/A 8172893 PDBbind: -logKd/Ki=5.31, Kd=4.9uM
    1615 1mfd:H (2.1) BS02 ABE N/A N/A N/A 8172893 PDBbind: -logKd/Ki=5.31, Kd=4.9uM
    1616 1mfd:L (2.1) BS01 ABE N/A N/A N/A 8172893 PDBbind: -logKd/Ki=5.31, Kd=4.9uM
    1617 1mfi:A (1.8) BS01 FHC 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P34884 10360941 MOAD: Ki=2.6uM
    PDBbind: -logKd/Ki=5.59, Ki=2.6uM
    1618 1mfi:A (1.8) BS02 FHC 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P34884 10360941 MOAD: Ki=2.6uM
    PDBbind: -logKd/Ki=5.59, Ki=2.6uM
    1619 1mfi:B (1.8) BS01 FHC 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P34884 10360941 MOAD: Ki=2.6uM
    PDBbind: -logKd/Ki=5.59, Ki=2.6uM
    1620 1mfi:B (1.8) BS02 FHC 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P34884 10360941 MOAD: Ki=2.6uM
    PDBbind: -logKd/Ki=5.59, Ki=2.6uM
    1621 1mh5:A (2.1) BS01 HAL ? GO:0005576 ... P01837 12948492 PDBbind: -logKd/Ki=9.21, Kd=0.61nM
    1622 1mh5:B (2.1) BS01 HAL ? N/A P01863 12948492 MOAD: Kd=0.61nM
    PDBbind: -logKd/Ki=9.21, Kd=0.61nM
    1623 1mhd:A (2.8) BS01 dna ? GO:0005667 ... P84022 9741623 PDBbind: Kd=114nM
    1624 1mhd:A (2.8) BS02 dna ? GO:0005667 ... P84022 9741623 PDBbind: Kd=114nM
    1625 1mhd:B (2.8) BS01 dna ? GO:0005667 ... P84022 9741623 PDBbind: Kd=114nM
    1626 1mhd:B (2.8) BS02 dna ? GO:0005667 ... P84022 9741623 PDBbind: Kd=114nM
    1627 1mj7:H (2.25) BS01 HAL N/A N/A N/A 12948492 MOAD: Kd=4.5nM
    PDBbind: -logKd/Ki=8.35, Kd=4.50nM
    1628 1mj7:L (2.25) BS01 HAL N/A N/A N/A 12948492 PDBbind: -logKd/Ki=8.35, Kd=4.50nM
    1629 1mjj:A (2.1) BS01 HAL N/A N/A N/A 12948492 MOAD: Kd=1.83nM
    PDBbind: -logKd/Ki=8.74, Kd=1.83nM
    1630 1mjj:B (2.1) BS01 HAL N/A N/A N/A 12948492 PDBbind: -logKd/Ki=8.74, Kd=1.83nM
    1631 1mkd:A (2.9) BS02 ZAR 3.1.4.53 GO:0004114 ... Q08499 12387865 PDBbind: -logKd/Ki=6.80, IC50=160nM
    BindingDB: IC50=390nM
    1632 1ml1:A (2.6) BS01 PGA 5.3.1.1 GO:0004807 ... P04789 9089815 PDBbind: -logKd/Ki=4.28, Ki=52uM
    1633 1mm6:A (2.15) BS01 QUS ? GO:0015276 ... P19491 12501192 MOAD: ic50=20nM
    PDBbind: -logKd/Ki=7.70, IC50=20nM
    1634 1mm7:A (1.65) BS02 QUS ? GO:0015276 ... P19491 12501192 MOAD: ic50=20nM
    PDBbind: -logKd/Ki=7.70, IC50=20nM
    1635 1mmp:B (2.3) BS05 RSS 3.4.24.23 GO:0004222 ... P09237 7756291 MOAD: Ki=0.85uM
    PDBbind: -logKd/Ki=6.07, Ki=0.85uM
    BindingDB: Ki=850nM
    1636 1mmq:A (1.9) BS05 RRS 3.4.24.23 GO:0004222 ... P09237 7756291 MOAD: Ki=0.03uM
    PDBbind: -logKd/Ki=7.52, Ki=0.03uM
    BindingDB: Ki=3nM
    1637 1mmr:A (2.4) BS05 SRS 3.4.24.23 GO:0004222 ... P09237 7756291 MOAD: Ki=4uM
    PDBbind: -logKd/Ki=5.40, Ki=4.0uM
    1638 1mn9:A (2.9) BS01 RTP 2.7.4.6 GO:0004550 ... P22887 12606760 PDBbind: -logKd/Ki=4.62, Kd=24uM
    1639 1mn9:B (2.9) BS01 RTP 2.7.4.6 GO:0004550 ... P22887 12606760 PDBbind: -logKd/Ki=4.62, Kd=24uM
    1640 1mnc:A (2.1) BS04 PLH 3.4.24.34 GO:0004222 ... P22894 7656015 PDBbind: -logKd/Ki=10.34, IC50=0.046nM
    1641 1mns:A (2.0) BS02 APG 5.1.2.2 GO:0000287 ... P11444 8292591 PDBbind: -logKd/Ki=4.17, Ki=67uM
    1642 1moq:A (1.57) BS01 GLP 2.6.1.16 GO:0004360 ... P17169 9739095 MOAD: Ki=0.35mM
    PDBbind: -logKd/Ki=3.46, Ki=0.35mM
    1643 1mpl:A (1.12) BS01 RE1 3.4.16.4 GO:0004180 ... P15555 12564922 PDBbind: -logKd/Ki=3.77, Ki=0.17mM
    1644 1mq5:A (2.1) BS02 XLC 3.4.21.6 GO:0004252 ... P00742 12501180 MOAD: Ki=1nM
    PDBbind: -logKd/Ki=9.00, Ki=1nM
    BindingDB: Ki=0.76nM
    1645 1mq6:A (2.1) BS02 XLD 3.4.21.6 GO:0004252 ... P00742 12501180 MOAD: Ki=7pM
    PDBbind: -logKd/Ki=11.15, Ki=7pM
    BindingDB: Ki=0.007nM
    1646 1mqd:A (1.46) BS01 SHI ? GO:0015276 ... P19491 12417307 MOAD: ic50=0.17uM
    PDBbind: -logKd/Ki=6.77, IC50=0.17uM
    1647 1mqg:A (2.15) BS01 IWD ? GO:0015276 ... P19491 12872125 MOAD: ic50=0.52uM
    PDBbind: -logKd/Ki=6.28, IC50=0.52uM
    BindingDB: Ki=105nM
    1648 1mqh:A (1.8) BS01 BWD ? GO:0015276 ... P19491 12872125 MOAD: ic50=0.3uM
    PDBbind: -logKd/Ki=6.52, IC50=0.30uM
    BindingDB: Ki=61nM
    1649 1mqi:A (1.35) BS01 FWD ? GO:0015276 ... P19491 12872125 MOAD: ic50=23.53nM
    PDBbind: -logKd/Ki=7.63, IC50=23.53nM
    BindingDB: Ki=4nM, EC50=460nM
    1650 1mqj:A (1.65) BS02 HWD ? GO:0015276 ... P19491 12872125 MOAD: ic50=4.76uM
    PDBbind: -logKd/Ki=5.32, IC50=4.76uM
    BindingDB: Ki=1220nM
    1651 1mrn:A (2.45) BS02 T5A 2.7.4.9 GO:0000287 ... P9WKE1 12454011 MOAD: Ki=30uM
    PDBbind: -logKd/Ki=4.52, Ki=30uM
    1652 1mrs:A (2.0) BS02 5HU 2.7.4.9 GO:0000287 ... P9WKE1 12454011 MOAD: Ki=110uM
    PDBbind: -logKd/Ki=3.96, Ki=110uM
    1653 1mrw:A (2.0) BS01 K57 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 15103623 MOAD: Kd=0.2nM
    PDBbind: -logKd/Ki=9.70, Kd=0.2nM
    1654 1mrw:B (2.0) BS01 K57 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 15103623 PDBbind: -logKd/Ki=9.70, Kd=0.2nM
    1655 1mrx:A (2.0) BS01 K57 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 15103623 PDBbind: -logKd/Ki=7.26, Kd=55nM
    1656 1mrx:B (2.0) BS01 K57 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 15103623 MOAD: Kd=55nM
    PDBbind: -logKd/Ki=7.26, Kd=55nM
    1657 1ms0:A (2.5) BS03 DAN 3.2.1.18 GO:0004308 ... Q26966 12419220 PDBbind: -logKd/Ki=2.91, Ki=1.23mM
    BindingDB: Ki=12300000nM
    1658 1ms6:A (1.9) BS01 BLN 3.4.22.27 GO:0006508 ... P25774 12459015 PDBbind: -logKd/Ki=9.52, Kd=0.3nM
    1659 1ms7:A (1.97) BS02 SHI ? GO:0015276 ... P19491 12417307 MOAD: ic50=0.17uM
    PDBbind: -logKd/Ki=6.77, IC50=0.17uM
    1660 1msm:A (2.0) BS01 JE2 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 15103623 PDBbind: -logKd/Ki=10.48, Kd=33pM
    1661 1msm:B (2.0) BS01 JE2 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 15103623 MOAD: Kd=33pM
    PDBbind: -logKd/Ki=10.48, Kd=33pM
    1662 1msn:A (2.0) BS01 JE2 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 15103623 PDBbind: -logKd/Ki=9.09, Kd=0.81nM
    1663 1msn:B (2.0) BS01 JE2 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 15103623 MOAD: Kd<1nM
    PDBbind: -logKd/Ki=9.09, Kd=0.81nM
    1664 1mto:A (3.2) BS01 F6P 2.7.1.11 GO:0003872 ... P00512 12390023 PDBbind: -logKd/Ki=6.96, Ki=0.11uM
    1665 1mto:A (3.2) BS02 F6P 2.7.1.11 GO:0003872 ... P00512 12390023 PDBbind: -logKd/Ki=6.96, Ki=0.11uM
    1666 1mto:B (3.2) BS01 F6P 2.7.1.11 GO:0003872 ... P00512 12390023 PDBbind: -logKd/Ki=6.96, Ki=0.11uM
    1667 1mto:B (3.2) BS02 F6P 2.7.1.11 GO:0003872 ... P00512 12390023 PDBbind: -logKd/Ki=6.96, Ki=0.11uM
    1668 1mtr:A (1.75) BS01 PI6 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 N/A PDBbind: -logKd/Ki=8.40, Ki=4nM
    1669 1mtr:B (1.75) BS01 PI6 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 N/A MOAD: Ki=4nM
    PDBbind: -logKd/Ki=8.40, Ki=4nM
    1670 1mu6:B (1.99) BS03 CDA 3.4.21.5 GO:0004252 ... P00734 12570369 MOAD: Ki=4.2nM
    PDBbind: -logKd/Ki=8.38, Ki=4.2nM
    BindingDB: Ki=4.2nM
    1671 1mu8:B (2.0) BS03 CDB 3.4.21.5 GO:0004252 ... P00734 12570369 MOAD: Ki=1nM
    PDBbind: -logKd/Ki=9.00, Ki=1.0nM
    1672 1mue:B (2.0) BS03 CDD 3.4.21.5 GO:0004252 ... P00734 12657281 MOAD: Ki=2.3nM
    PDBbind: -logKd/Ki=8.64, Ki=2.3nM
    BindingDB: Ki=2.3nM
    1673 1mui:A (2.8) BS01 AB1 3.4.23.16 GO:0004190 ... Q903J0 12057670 PDBbind: -logKd/Ki=11.89, Ki=1.3pM
    1674 1mui:B (2.8) BS01 AB1 3.4.23.16 GO:0004190 ... Q903J0 12057670 PDBbind: -logKd/Ki=11.89, Ki=1.3pM
    1675 1mwt:A (2.45) BS01 PNM 2.4.1.129 GO:0008658 ... Q93IC2 12389036 PDBbind: -logKd/Ki=1.88, Kd=13.3mM
    1676 1mx1:A (2.4) BS02 THA 3.1.1.1
    3.1.1.13
    3.1.1.56    		 GO:0004771 ... P23141 12725862 PDBbind: -logKd/Ki=4.00, Ki>100uM
    BindingDB: IC50=>100000nM, Ki=>100000nM
    1677 1mxo:A (1.83) BS01 SM2 3.5.2.6 GO:0008800 ... P00811 12526668 PDBbind: -logKd/Ki=9.00, Ki=1nM
    1678 1mxu:A (1.8) BS02 BWD ? GO:0015276 ... P19491 12731861 MOAD: ic50=4uM
    PDBbind: -logKd/Ki=5.40, IC50=4.0uM
    BindingDB: Ki=61nM
    1679 1my3:A (1.75) BS02 BWD ? GO:0015276 ... P19491 12731861 PDBbind: -logKd/Ki=5.40, IC50=4.0uM
    BindingDB: Ki=61nM
    1680 1my4:A (1.9) BS02 IWD ? GO:0015276 ... P19491 12731861 PDBbind: -logKd/Ki=6.98, Ki=105nM
    BindingDB: Ki=105nM
    1681 1my8:A (1.72) BS01 SM3 3.5.2.6 GO:0008800 ... P00811 12526668 MOAD: Ki=0.035uM
    PDBbind: -logKd/Ki=7.46, Ki=35nM
    1682 1mzc:B (2.0) BS05 BNE 2.5.1.58 GO:0003824 ... P49356 12825937 MOAD: ic50=0.06nM
    PDBbind: -logKd/Ki=10.22, IC50=0.06nM
    BindingDB: IC50=0.06nM
    1683 1mzs:A (2.1) BS01 669 2.3.1.180 GO:0004315 ... P0A6R0 12502353 MOAD: ic50=7uM
    PDBbind: -logKd/Ki=5.15, IC50=7.0uM
    1684 1n0s:A (2.0) BS01 FLU ? GO:0000302 ... P09464 12945055 MOAD: Kd=35.2nM
    PDBbind: -logKd/Ki=7.45, Kd=35.2nM
    1685 1n0t:A (2.1) BS01 AT1 ? GO:0015276 ... P19491 12519060 MOAD: ic50=12.2uM
    PDBbind: -logKd/Ki=4.91, IC50=12.2uM
    1686 1n1g:A (2.5) BS01 BCP 1.1.1.8 GO:0005829 ... P90551 12445769 MOAD: ic50=5mM
    PDBbind: -logKd/Ki=2.30, IC50~5mM
    1687 1n1g:A (2.5) BS02 BCP 1.1.1.8 GO:0005829 ... P90551 12445769 MOAD: ic50=5mM
    PDBbind: -logKd/Ki=2.30, IC50~5mM
    1688 1n1m:A (2.5) BS01 A3M 3.4.14.5 GO:0001618 ... P27487 12483204 MOAD: Ki=2uM
    PDBbind: -logKd/Ki=5.70, Ki=2uM
    BindingDB: IC50=4000nM, Ki=470nM
    1689 1n1t:A (1.6) BS01 DAN 3.2.1.18 GO:0004308 ... O44049 12507479 PDBbind: -logKd/Ki=3.85, Ki=140uM
    1690 1n1v:A (2.1) BS01 DAN 3.2.1.18 GO:0004308 ... O44049 12507479 MOAD: Ki=140uM
    PDBbind: -logKd/Ki=3.85, Ki=140uM
    1691 1n2v:A (2.1) BS02 BDI 2.4.2.29 GO:0002099 ... P28720 12646024 MOAD: Ki=83uM
    PDBbind: -logKd/Ki=4.08, Ki=83uM
    1692 1n32:B (3.0) BS01 rna ? GO:0003735 ... P80371 12464183 PDBbind: Kd=190uM
    1693 1n32:C (3.0) BS01 rna ? GO:0003676 ... P80372 12464183 PDBbind: Kd=190uM
    1694 1n32:D (3.0) BS01 rna ? GO:0003723 ... P80373 12464183 PDBbind: Kd=190uM
    1695 1n32:E (3.0) BS01 rna ? GO:0003723 ... Q5SHQ5 12464183 PDBbind: Kd=190uM
    1696 1n32:F (3.0) BS01 rna ? GO:0003735 ... Q5SLP8 12464183 PDBbind: Kd=190uM
    1697 1n32:G (3.0) BS01 rna ? GO:0000028 ... P17291 12464183 PDBbind: Kd=190uM
    1698 1n32:H (3.0) BS01 rna ? GO:0003735 ... P0DOY9 12464183 PDBbind: Kd=190uM
    1699 1n32:I (3.0) BS01 rna ? GO:0000049 ... P80374 12464183 PDBbind: Kd=190uM
    1700 1n32:J (3.0) BS01 rna ? GO:0000049 ... Q5SHN7 12464183 PDBbind: Kd=190uM
    1701 1n32:K (3.0) BS01 rna ? GO:0003735 ... P80376 12464183 PDBbind: Kd=190uM
    1702 1n32:L (3.0) BS01 rna ? GO:0000049 ... Q5SHN3 12464183 PDBbind: Kd=190uM
    1703 1n32:M (3.0) BS01 rna ? GO:0000049 ... P80377 12464183 PDBbind: Kd=190uM
    1704 1n32:N (3.0) BS01 rna ? GO:0003735 ... P0DOY6 12464183 PDBbind: Kd=190uM
    1705 1n32:O (3.0) BS01 rna ? GO:0003735 ... Q5SJ76 12464183 PDBbind: Kd=190uM
    1706 1n32:P (3.0) BS01 rna ? GO:0003735 ... Q5SJH3 12464183 PDBbind: Kd=190uM
    1707 1n32:Q (3.0) BS01 rna ? GO:0003735 ... P0DOY7 12464183 PDBbind: Kd=190uM
    1708 1n32:R (3.0) BS01 rna ? GO:0003735 ... Q5SLQ0 12464183 PDBbind: Kd=190uM
    1709 1n32:S (3.0) BS01 rna ? GO:0000028 ... Q5SHP2 12464183 PDBbind: Kd=190uM
    1710 1n32:T (3.0) BS01 rna ? GO:0003723 ... P80380 12464183 PDBbind: Kd=190uM
    1711 1n33:B (3.35) BS01 rna ? GO:0003735 ... P80371 12464183 PDBbind: Kd=86uM
    1712 1n33:C (3.35) BS01 rna ? GO:0003676 ... P80372 12464183 PDBbind: Kd=86uM
    1713 1n33:D (3.35) BS01 rna ? GO:0003723 ... P80373 12464183 PDBbind: Kd=86uM
    1714 1n33:E (3.35) BS01 rna ? GO:0003723 ... Q5SHQ5 12464183 PDBbind: Kd=86uM
    1715 1n33:F (3.35) BS01 rna ? GO:0003735 ... Q5SLP8 12464183 PDBbind: Kd=86uM
    1716 1n33:G (3.35) BS01 rna ? GO:0000028 ... P17291 12464183 PDBbind: Kd=86uM
    1717 1n33:H (3.35) BS01 rna ? GO:0003735 ... P0DOY9 12464183 PDBbind: Kd=86uM
    1718 1n33:I (3.35) BS01 rna ? GO:0000049 ... P80374 12464183 PDBbind: Kd=86uM
    1719 1n33:J (3.35) BS01 rna ? GO:0000049 ... Q5SHN7 12464183 PDBbind: Kd=86uM
    1720 1n33:K (3.35) BS01 rna ? GO:0003735 ... P80376 12464183 PDBbind: Kd=86uM
    1721 1n33:L (3.35) BS01 rna ? GO:0000049 ... Q5SHN3 12464183 PDBbind: Kd=86uM
    1722 1n33:M (3.35) BS01 rna ? GO:0000049 ... P80377 12464183 PDBbind: Kd=86uM
    1723 1n33:N (3.35) BS01 rna ? GO:0003735 ... P0DOY6 12464183 PDBbind: Kd=86uM
    1724 1n33:O (3.35) BS01 rna ? GO:0003735 ... Q5SJ76 12464183 PDBbind: Kd=86uM
    1725 1n33:P (3.35) BS01 rna ? GO:0003735 ... Q5SJH3 12464183 PDBbind: Kd=86uM
    1726 1n33:Q (3.35) BS01 rna ? GO:0003735 ... P0DOY7 12464183 PDBbind: Kd=86uM
    1727 1n33:R (3.35) BS01 rna ? GO:0003735 ... Q5SLQ0 12464183 PDBbind: Kd=86uM
    1728 1n33:S (3.35) BS01 rna ? GO:0000028 ... Q5SHP2 12464183 PDBbind: Kd=86uM
    1729 1n33:T (3.35) BS01 rna ? GO:0003723 ... P80380 12464183 PDBbind: Kd=86uM
    1730 1n34:B (3.8) BS01 rna ? GO:0003735 ... P80371 12464183 PDBbind: Kd=220uM
    1731 1n34:C (3.8) BS01 rna ? GO:0003676 ... P80372 12464183 PDBbind: Kd=220uM
    1732 1n34:D (3.8) BS01 rna ? GO:0003723 ... P80373 12464183 PDBbind: Kd=220uM
    1733 1n34:E (3.8) BS01 rna ? GO:0003723 ... Q5SHQ5 12464183 PDBbind: Kd=220uM
    1734 1n34:F (3.8) BS01 rna ? GO:0003735 ... Q5SLP8 12464183 PDBbind: Kd=220uM
    1735 1n34:G (3.8) BS01 rna ? GO:0000028 ... P17291 12464183 PDBbind: Kd=220uM
    1736 1n34:H (3.8) BS01 rna ? GO:0003735 ... P0DOY9 12464183 PDBbind: Kd=220uM
    1737 1n34:I (3.8) BS01 rna ? GO:0000049 ... P80374 12464183 PDBbind: Kd=220uM
    1738 1n34:J (3.8) BS01 rna ? GO:0000049 ... Q5SHN7 12464183 PDBbind: Kd=220uM
    1739 1n34:K (3.8) BS01 rna ? GO:0003735 ... P80376 12464183 PDBbind: Kd=220uM
    1740 1n34:L (3.8) BS01 rna ? GO:0000049 ... Q5SHN3 12464183 PDBbind: Kd=220uM
    1741 1n34:M (3.8) BS01 rna ? GO:0000049 ... P80377 12464183 PDBbind: Kd=220uM
    1742 1n34:N (3.8) BS01 rna ? GO:0003735 ... P0DOY6 12464183 PDBbind: Kd=220uM
    1743 1n34:O (3.8) BS01 rna ? GO:0003735 ... Q5SJ76 12464183 PDBbind: Kd=220uM
    1744 1n34:P (3.8) BS01 rna ? GO:0003735 ... Q5SJH3 12464183 PDBbind: Kd=220uM
    1745 1n34:Q (3.8) BS01 rna ? GO:0003735 ... P0DOY7 12464183 PDBbind: Kd=220uM
    1746 1n34:R (3.8) BS01 rna ? GO:0003735 ... Q5SLQ0 12464183 PDBbind: Kd=220uM
    1747 1n34:S (3.8) BS01 rna ? GO:0000028 ... Q5SHP2 12464183 PDBbind: Kd=220uM
    1748 1n34:T (3.8) BS01 rna ? GO:0003723 ... P80380 12464183 PDBbind: Kd=220uM
    1749 1n36:B (3.65) BS01 rna ? GO:0003735 ... P80371 12464183 PDBbind: Kd=150uM
    1750 1n36:C (3.65) BS01 rna ? GO:0003676 ... P80372 12464183 PDBbind: Kd=150uM
    1751 1n36:D (3.65) BS01 rna ? GO:0003723 ... P80373 12464183 PDBbind: Kd=150uM
    1752 1n36:E (3.65) BS01 rna ? GO:0003723 ... Q5SHQ5 12464183 PDBbind: Kd=150uM
    1753 1n36:F (3.65) BS01 rna ? GO:0003735 ... Q5SLP8 12464183 PDBbind: Kd=150uM
    1754 1n36:G (3.65) BS01 rna ? GO:0000028 ... P17291 12464183 PDBbind: Kd=150uM
    1755 1n36:H (3.65) BS01 rna ? GO:0003735 ... P0DOY9 12464183 PDBbind: Kd=150uM
    1756 1n36:I (3.65) BS01 rna ? GO:0000049 ... P80374 12464183 PDBbind: Kd=150uM
    1757 1n36:J (3.65) BS01 rna ? GO:0000049 ... Q5SHN7 12464183 PDBbind: Kd=150uM
    1758 1n36:K (3.65) BS01 rna ? GO:0003735 ... P80376 12464183 PDBbind: Kd=150uM
    1759 1n36:L (3.65) BS01 rna ? GO:0000049 ... Q5SHN3 12464183 PDBbind: Kd=150uM
    1760 1n36:M (3.65) BS01 rna ? GO:0000049 ... P80377 12464183 PDBbind: Kd=150uM
    1761 1n36:N (3.65) BS01 rna ? GO:0003735 ... P0DOY6 12464183 PDBbind: Kd=150uM
    1762 1n36:O (3.65) BS01 rna ? GO:0003735 ... Q5SJ76 12464183 PDBbind: Kd=150uM
    1763 1n36:P (3.65) BS01 rna ? GO:0003735 ... Q5SJH3 12464183 PDBbind: Kd=150uM
    1764 1n36:Q (3.65) BS01 rna ? GO:0003735 ... P0DOY7 12464183 PDBbind: Kd=150uM
    1765 1n36:R (3.65) BS01 rna ? GO:0003735 ... Q5SLQ0 12464183 PDBbind: Kd=150uM
    1766 1n36:S (3.65) BS01 rna ? GO:0000028 ... Q5SHP2 12464183 PDBbind: Kd=150uM
    1767 1n36:T (3.65) BS01 rna ? GO:0003723 ... P80380 12464183 PDBbind: Kd=150uM
    1768 1n3c:A (2.7) BS01 dna 3.2.2.-
    4.2.99.18    		 GO:0000978 ... O15527 12578369 PDBbind: Kd=700nM
    1769 1n3c:A (2.7) BS02 dna 3.2.2.-
    4.2.99.18    		 GO:0000978 ... O15527 12578369 PDBbind: Kd=700nM
    1770 1n3i:A (1.9) BS02 DIH 6.3.2.1 GO:0003824 ... P9WIL5 12755607 MOAD: Kd=1.3nM
    PDBbind: -logKd/Ki=8.89, Ki=1.3nM
    1771 1n3i:B (1.9) BS02 DIH 6.3.2.1 GO:0003824 ... P9WIL5 12755607 MOAD: Kd=1.3nM
    PDBbind: -logKd/Ki=8.89, Ki=1.3nM
    1772 1n3z:A (1.65) BS01 U3P 4.6.1.18 GO:0003676 ... P00669 12833549 PDBbind: -logKd/Ki=4.20, Ki=63.2uM
    BindingDB: Ki=63200nM
    1773 1n43:A (1.89) BS01 BTN ? GO:0009374 ... P22629 12925786 PDBbind: -logKd/Ki=10.55, Kd~28pM
    BindingDB: Kd=1.000000nM
    1774 1n43:D (1.89) BS01 BTN ? GO:0009374 ... P22629 12925786 PDBbind: -logKd/Ki=10.55, Kd~28pM
    BindingDB: Kd=1.000000nM
    1775 1n46:A (2.2) BS01 PFA ? GO:0003677 ... P10828 12565933 MOAD: Ki=0.03nM
    PDBbind: -logKd/Ki=10.52, Ki=0.03nM
    1776 1n4h:A (2.1) BS02 REA ? GO:0003677 ... P45446 12958591 MOAD: Kd=280nM
    PDBbind: -logKd/Ki=6.55, Ki=0.28uM
    1777 1n4k:A (2.2) BS01 I3P ? GO:0005220 ... P11881 12442173 MOAD: Kd=0.09nM
    PDBbind: -logKd/Ki=10.05, Kd=0.09nM
    1778 1n5r:A (2.25) BS01 PRM 3.1.1.7 GO:0001919 ... P21836 12505979 MOAD: Ki=2.2uM
    PDBbind: -logKd/Ki=5.66, Ki=2.2uM
    1779 1n77:A (2.4) BS01 rna 6.1.1.17 GO:0000049 ... P27000 12554668 PDBbind: Kd=90uM
    1780 1n77:B (2.4) BS01 rna 6.1.1.17 GO:0000049 ... P27000 12554668 PDBbind: Kd=90uM
    1781 1n78:A (2.1) BS01 rna 6.1.1.17 GO:0000049 ... P27000 12554668 PDBbind: Ki=3uM
    1782 1n78:B (2.1) BS01 rna 6.1.1.17 GO:0000049 ... P27000 12554668 PDBbind: Ki=3uM
    1783 1n7i:A (2.8) BS02 LY1 2.1.1.28 GO:0004603 ... P11086 14695818 PDBbind: -logKd/Ki=6.59, Ki=0.26uM
    BindingDB: Ki=4400nM
    1784 1n7j:A (2.7) BS02 IDI 2.1.1.28 GO:0004603 ... P11086 14695818 PDBbind: -logKd/Ki=6.43, Ki=0.37uM
    BindingDB: Ki=93nM
    1785 1n8u:A (1.8) BS01 BDD ? N/A Q9NG96 12697900 MOAD: Kd=0.93uM
    PDBbind: -logKd/Ki=6.03, Kd=0.93uM
    1786 1n8u:A (1.8) BS02 BDD ? N/A Q9NG96 12697900 MOAD: Kd=0.93uM
    PDBbind: -logKd/Ki=6.03, Kd=0.93uM
    1787 1n8u:A (1.8) BS03 BDD ? N/A Q9NG96 12697900 MOAD: Kd=0.93uM
    PDBbind: -logKd/Ki=6.03, Kd=0.93uM
    1788 1n8v:A (1.39) BS01 BDD ? N/A Q9NG96 12697900 MOAD: Kd=0.93uM
    PDBbind: -logKd/Ki=6.03, Kd=0.93uM
    1789 1n8v:A (1.39) BS02 BDD ? N/A Q9NG96 12697900 MOAD: Kd=0.93uM
    PDBbind: -logKd/Ki=6.03, Kd=0.93uM
    1790 1n8v:A (1.39) BS03 BDD ? N/A Q9NG96 12697900 MOAD: Kd=0.93uM
    PDBbind: -logKd/Ki=6.03, Kd=0.93uM
    1791 1n94:A (3.5) BS02 TIN 2.5.1.58
    2.5.1.59    		 GO:0008318 ... Q04631 12657282 PDBbind: -logKd/Ki=8.96, IC50=1.1nM
    1792 1n94:B (3.5) BS02 TIN 2.5.1.58 GO:0003824 ... Q02293 12657282 PDBbind: -logKd/Ki=8.96, IC50=1.1nM
    1793 1n95:B (2.3) BS03 FTH 2.5.1.58 GO:0003824 ... Q02293 12657282 PDBbind: -logKd/Ki=8.92, IC50=1.2nM
    1794 1n9a:B (3.2) BS03 FTI 2.5.1.58 GO:0003824 ... Q02293 12657283 PDBbind: -logKd/Ki=8.66, IC50=2.2nM
    1795 1n9m:A (1.6) BS01 BTN ? GO:0009374 ... P22629 12925786 PDBbind: -logKd/Ki=10.96, Kd~11pM
    BindingDB: Kd=1.000000nM
    1796 1n9m:D (1.6) BS01 BTN ? GO:0009374 ... P22629 12925786 PDBbind: -logKd/Ki=10.96, Kd~11pM
    BindingDB: Kd=1.000000nM
    1797 1nax:A (2.7) BS01 IH5 ? GO:0003677 ... P10828 12699376 PDBbind: -logKd/Ki=6.43, Ki=0.37uM
    BindingDB: IC50=1.1nM, Ki=0.37nM, EC50=1.12nM
    1798 1nc1:A (2.0) BS01 MTH 3.2.2.9 GO:0003824 ... P0AF12 12496243 MOAD: Ki=0.75uM
    PDBbind: -logKd/Ki=6.12, Ki=0.75uM
    1799 1nc1:B (2.0) BS01 MTH 3.2.2.9 GO:0003824 ... P0AF12 12496243 MOAD: Ki=0.75uM
    PDBbind: -logKd/Ki=6.12, Ki=0.75uM
    1800 1nc3:A (2.2) BS01 FMC 3.2.2.9 GO:0003824 ... P0AF12 12496243 MOAD: Ki=10uM
    PDBbind: -logKd/Ki=5.00, Ki=10uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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