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●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1401 1kwr:A (2.25) BS02 SG2 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 12166932 MOAD: ic50=0.25uM
    PDBbind: -logKd/Ki=6.60, IC50=0.25uM
    BindingDB: IC50=245.5nM
    1402 1kyn:A (3.5) BS01 KTP 3.4.21.20 GO:0002003 ... P08311 11942800 PDBbind: -logKd/Ki=5.39, IC50=4.1uM
    BindingDB: IC50=4100nM
    1403 1kz8:A (2.0) BS04 PFE 3.1.3.11 GO:0005737 ... P00636 12190310 MOAD: ic50=0.83uM
    PDBbind: -logKd/Ki=6.08, IC50=0.83uM
    1404 1kz8:F (2.0) BS04 PFE 3.1.3.11 GO:0005737 ... P00636 12190310 MOAD: ic50=0.83uM
    PDBbind: -logKd/Ki=6.08, IC50=0.83uM
    1405 1kzk:A (1.09) BS01 JE2 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 11926820 MOAD: Ki=41pM
    PDBbind: -logKd/Ki=10.39, Ki=41pM
    1406 1kzk:B (1.09) BS01 JE2 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03369 11926820 PDBbind: -logKd/Ki=10.39, Ki=41pM
    1407 1kzn:A (2.3) BS01 CBN 5.6.2.2 GO:0003677 ... P0AES6 12044152 MOAD: Kd=1.2nM
    PDBbind: -logKd/Ki=8.92, Kd=1.2nM
    BindingDB: IC50=73nM
    1408 1l1c:A (-1.00) BS01 rna ? GO:0003723 ... P39805 11953318 PDBbind: Kd=10nM
    1409 1l1c:B (-1.00) BS01 rna ? GO:0003723 ... P39805 11953318 PDBbind: Kd=10nM
    1410 1l2s:A (1.94) BS01 STC 3.5.2.6 GO:0008800 ... P00811 12121656 MOAD: Ki=26uM
    PDBbind: -logKd/Ki=4.59, Ki=26uM
    BindingDB: Ki=26000nM
    1411 1l2s:A (1.94) BS02 STC 3.5.2.6 GO:0008800 ... P00811 12121656 MOAD: Ki=26uM
    PDBbind: -logKd/Ki=4.59, Ki=26uM
    BindingDB: Ki=26000nM
    1412 1l5q:A (2.25) BS04 CFF 2.4.1.1 GO:0000166 ... P06737 12204691 MOAD: Kd=108uM
    PDBbind: -logKd/Ki=3.97, Kd=108uM
    1413 1l5q:A (2.25) BS05 CFF 2.4.1.1 GO:0000166 ... P06737 12204691 MOAD: Kd=108uM
    PDBbind: -logKd/Ki=3.97, Kd=108uM
    1414 1l5r:A (2.1) BS04 RBF 2.4.1.1 GO:0000166 ... P06737 12204691 MOAD: Kd=17uM
    PDBbind: -logKd/Ki=4.77, Kd=17uM
    1415 1l5s:A (2.1) BS04 URC 2.4.1.1 GO:0000166 ... P06737 12204691 MOAD: Kd=550uM
    PDBbind: -logKd/Ki=3.26, Kd=550uM
    1416 1l5s:B (2.1) BS05 URC 2.4.1.1 GO:0000166 ... P06737 12204691 MOAD: Kd=550uM
    PDBbind: -logKd/Ki=3.26, Kd=550uM
    1417 1l6m:A (2.4) BS01 DBH ? GO:0005506 ... P80188 12453412 PDBbind: -logKd/Ki=8.10, Kd=7.9nM
    1418 1l6m:A (2.4) BS02 DBH ? GO:0005506 ... P80188 12453412 PDBbind: -logKd/Ki=8.10, Kd=7.9nM
    1419 1l6s:A (1.7) BS02 DSB 4.2.1.24 GO:0000287 ... P0ACB2 11909869 PDBbind: -logKd/Ki=4.41, IC50=39uM
    1420 1l6y:A (1.9) BS02 4OX 4.2.1.24 GO:0000287 ... P0ACB2 11909869 PDBbind: -logKd/Ki=3.66, IC50=0.22mM
    1421 1l7x:A (2.3) BS04 CFF 2.4.1.1 GO:0000166 ... P06737 12204691 MOAD: Kd=92uM
    PDBbind: -logKd/Ki=4.04, Kd=92uM
    1422 1l7x:A (2.3) BS05 CFF 2.4.1.1 GO:0000166 ... P06737 12204691 MOAD: Kd=92uM
    PDBbind: -logKd/Ki=4.04, Kd=92uM
    1423 1l7x:B (2.3) BS05 CFF 2.4.1.1 GO:0000166 ... P06737 12204691 MOAD: Kd=92uM
    PDBbind: -logKd/Ki=4.04, Kd=92uM
    1424 1l83:A (1.7) BS01 BNZ 3.2.1.17 GO:0003796 ... P00720 1731252 MOAD: Kd=0.4mM
    PDBbind: -logKd/Ki=3.40, Kd=0.40mM
    1425 1l8g:A (2.5) BS01 DBD 3.1.3.48 GO:0004725 ... P18031 11732900 PDBbind: -logKd/Ki=6.22, Ki=0.6uM
    BindingDB: Ki=1100nM
    1426 1laf:E (2.06) BS01 ARG ? GO:0006865 ... P02911 7929349 MOAD: Kd=14nM
    PDBbind: -logKd/Ki=7.85, Kd=14nM
    1427 1lag:E (2.06) BS01 HIS ? GO:0006865 ... P02911 7929349 MOAD: Kd=500nM
    PDBbind: -logKd/Ki=6.30, Kd=500nM
    1428 1lah:E (2.06) BS01 ORN ? GO:0006865 ... P02911 7929349 MOAD: Kd=30nM
    PDBbind: -logKd/Ki=7.52, Kd=30nM
    1429 1lan:A (1.9) BS03 LEU 3.4.11.1
    3.4.11.5
    3.4.13.23    		 GO:0004177 ... P00727 7578088 MOAD: Ki=60nM
    PDBbind: -logKd/Ki=7.22, Ki=60nM
    1430 1lbf:A (2.05) BS01 137 4.1.1.48 GO:0000162 ... Q06121 12054868 MOAD: Kd=0.014uM
    PDBbind: -logKd/Ki=7.85, Kd=0.014uM
    1431 1lcp:A (1.65) BS03 PLU 3.4.11.1
    3.4.11.5
    3.4.13.23    		 GO:0004177 ... P00727 7619821 MOAD: Ki=0.23uM
    PDBbind: -logKd/Ki=6.64, Ki=0.23uM
    1432 1ld7:B (2.0) BS05 U66 2.5.1.58 GO:0003824 ... P49356 12036349 MOAD: ic50=1.1nM
    PDBbind: -logKd/Ki=8.96, IC50=1.1nM
    1433 1ld8:B (1.8) BS05 U49 2.5.1.58 GO:0003824 ... P49356 12036349 MOAD: ic50=3.5nM
    PDBbind: -logKd/Ki=8.46, IC50=3.5nM
    1434 1le8:A (2.3) BS01 dna ? GO:0000981 ... P0CY10 12121651 PDBbind: Kd=4.51uM
    1435 1le8:A (2.3) BS02 dna ? GO:0000981 ... P0CY10 12121651 PDBbind: Kd=4.51uM
    1436 1le8:B (2.3) BS01 dna ? GO:0003677 ... P0CY08 12121651 PDBbind: Kd=4.51uM
    1437 1le8:B (2.3) BS02 dna ? GO:0003677 ... P0CY08 12121651 PDBbind: Kd=4.51uM
    1438 1lee:A (1.9) BS01 R36 3.4.23.39 GO:0004190 ... P46925 12454457 PDBbind: -logKd/Ki=7.74, Ki=18nM
    1439 1lei:A (2.7) BS01 dna ? GO:0003677 ... Q04207 11970949 PDBbind: Kd=0.8nM
    1440 1lei:A (2.7) BS02 dna ? GO:0003677 ... Q04207 11970949 PDBbind: Kd=0.8nM
    1441 1lei:B (2.7) BS01 dna ? GO:0003677 ... P25799 11970949 PDBbind: Kd=0.8nM
    1442 1lei:B (2.7) BS02 dna ? GO:0003677 ... P25799 11970949 PDBbind: Kd=0.8nM
    1443 1lev:A (2.15) BS04 CLI 3.1.3.11 GO:0005737 ... P00636 12781194 MOAD: ic50=2.5uM
    PDBbind: -logKd/Ki=5.60, IC50=2.5uM
    1444 1lf2:A (1.8) BS01 R37 3.4.23.39 GO:0004190 ... P46925 12454457 PDBbind: -logKd/Ki=7.52, Ki=30nM
    1445 1lf3:A (2.7) BS01 EH5 3.4.23.39 GO:0004190 ... P46925 12614616 PDBbind: -logKd/Ki=7.00, Ki=100nM
    1446 1lfo:A (2.3) BS01 OLA ? GO:0003682 ... P02692 9054409 MOAD: Kd~2uM
    PDBbind: -logKd/Ki=6.70, Kd~0.2uM
    BindingDB: Ki=2900nM
    1447 1lfo:A (2.3) BS02 OLA ? GO:0003682 ... P02692 9054409 MOAD: Kd~2uM
    PDBbind: -logKd/Ki=6.70, Kd~0.2uM
    BindingDB: Ki=2900nM
    1448 1lgt:A (1.7) BS03 BP3 1.13.11.39 GO:0003824 ... P47228 12415290 MOAD: Kd=0.8uM
    PDBbind: -logKd/Ki=6.10, Kd=0.8uM
    1449 1lgt:A (1.7) BS04 BP3 1.13.11.39 GO:0003824 ... P47228 12415290 MOAD: Kd=0.8uM
    PDBbind: -logKd/Ki=6.10, Kd=0.8uM
    1450 1lgw:A (1.85) BS01 1AN 3.2.1.17 GO:0003796 ... P00720 12217695 MOAD: Kd=100uM
    PDBbind: -logKd/Ki=4.00, Kd=100uM
    1451 1lhc:H (1.95) BS03 DP7 3.4.21.5 GO:0004252 ... P00734 7893672 PDBbind: -logKd/Ki=10.40, Ki=0.04nM
    BindingDB: Ki=0.040000nM
    1452 1lhd:H (2.35) BS03 DI2 3.4.21.5 GO:0004252 ... P00734 7893672 PDBbind: -logKd/Ki=9.62, Ki=0.24nM
    BindingDB: Ki=0.240000nM
    1453 1lhe:H (2.25) BS03 DI3 3.4.21.5 GO:0004252 ... P00734 7893672 PDBbind: -logKd/Ki=9.54, Ki=0.29nM
    1454 1lhf:H (2.4) BS03 DI4 3.4.21.5 GO:0004252 ... P00734 7893672 PDBbind: -logKd/Ki=8.09, Ki=8.1nM
    1455 1lhg:H (2.25) BS03 DI5 3.4.21.5 GO:0004252 ... P00734 7893672 PDBbind: -logKd/Ki=7.10, Ki=79nM
    1456 1lhu:A (1.8) BS02 EST ? N/A P04278 12065592 PDBbind: -logKd/Ki=8.83, Kd=1.48nM
    BindingDB: IC50=50nM, Kd=1.5nM
    1457 1lhv:A (2.0) BS03 NOG ? N/A P04278 12065592 PDBbind: -logKd/Ki=8.91, Kd=1.23nM
    BindingDB: Kd=1.2nM
    1458 1lhw:A (1.75) BS02 ESM ? N/A P04278 12228253 MOAD: Kd=6.9nM
    PDBbind: -logKd/Ki=9.08, Kd=0.832nM
    BindingDB: Kd=0.832000nM
    1459 1li3:A (1.85) BS01 3CH 3.2.1.17 GO:0003796 ... P00720 12217695 MOAD: Kd=56uM
    PDBbind: -logKd/Ki=4.25, Kd=56uM
    1460 1li6:A (2.0) BS01 5MP 3.2.1.17 GO:0003796 ... P00720 12217695 MOAD: Ka=6300M^-1
    PDBbind: -logKd/Ki=3.80, Kd=0.16mM
    1461 1ljt:A (2.0) BS01 HDI 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 11997397 MOAD: ic50=7uM
    PDBbind: -logKd/Ki=5.15, IC50=7uM
    BindingDB: IC50=7000nM, Ki=21000nM
    1462 1ljt:A (2.0) BS02 HDI 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 11997397 MOAD: ic50=7uM
    PDBbind: -logKd/Ki=5.15, IC50=7uM
    BindingDB: IC50=7000nM, Ki=21000nM
    1463 1ljt:B (2.0) BS01 HDI 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 11997397 MOAD: ic50=7uM
    PDBbind: -logKd/Ki=5.15, IC50=7uM
    BindingDB: IC50=7000nM, Ki=21000nM
    1464 1ljt:B (2.0) BS02 HDI 5.3.2.1
    5.3.3.12    		 GO:0001516 ... P14174 11997397 MOAD: ic50=7uM
    PDBbind: -logKd/Ki=5.15, IC50=7uM
    BindingDB: IC50=7000nM, Ki=21000nM
    1465 1lke:A (1.9) BS01 DOG ? GO:0000302 ... P09464 12823976 MOAD: Kd=30.2nM
    PDBbind: -logKd/Ki=7.52, Kd=30.2nM
    1466 1lkx:A (3.0) BS02 ADP ? GO:0003774 ... Q03479 12032065 PDBbind: -logKd/Ki=5.15, Kd=7.1uM
    1467 1ll4:A (2.8) BS01 AMI 3.2.1.14 GO:0000272 ... P0CB51 12079386 PDBbind: -logKd/Ki=7.22, Ki=60nM
    1468 1llb:B (1.72) BS01 PCN 3.5.2.6 GO:0008800 ... P00811 12323371 PDBbind: -logKd/Ki=6.05, IC50=900nM
    1469 1lnm:A (1.9) BS01 DTX ? GO:0000302 ... P09464 12823976 MOAD: Kd=2nM
    PDBbind: -logKd/Ki=8.70, Kd=2.0nM
    1470 1lo1:A (-1.00) BS01 dna ? GO:0003700 ... O95718 12654265 PDBbind: Kd=7.1nM
    1471 1lo1:A (-1.00) BS02 dna ? GO:0003700 ... O95718 12654265 PDBbind: Kd=7.1nM
    1472 1lol:A (1.9) BS02 XMP 4.1.1.23 GO:0004590 ... O26232 12011084 MOAD: Ki=0.41uM
    PDBbind: -logKd/Ki=6.39, Ki=0.41uM
    1473 1lol:B (1.9) BS02 XMP 4.1.1.23 GO:0004590 ... O26232 12011084 MOAD: Ki=0.41uM
    PDBbind: -logKd/Ki=6.39, Ki=0.41uM
    1474 1loq:A (1.5) BS01 U 4.1.1.23 GO:0004590 ... O26232 12011084 MOAD: Ki=0.2mM
    PDBbind: -logKd/Ki=3.70, Ki=0.2mM
    1475 1lor:A (1.6) BS01 BMP 4.1.1.23 GO:0004590 ... O26232 12011084 MOAD: Ki=8.8pM
    PDBbind: -logKd/Ki=11.06, Ki=8.8pM
    1476 1lox:A (2.4) BS02 RS7 1.13.11.-
    1.13.11.12
    1.13.11.31
    1.13.11.33    		 GO:0001503 ... P12530 9406550 MOAD: Ki=3uM
    PDBbind: -logKd/Ki=5.52, Ki=3uM
    1477 1lpg:B (2.0) BS02 IMA 3.4.21.6 GO:0004252 ... P00742 12061878 MOAD: Ki=82nM
    PDBbind: -logKd/Ki=7.09, Ki=82nM
    BindingDB: Ki=82nM
    1478 1lpk:B (2.2) BS02 CBB 3.4.21.6 GO:0004252 ... P00742 12061878 MOAD: Ki=28nM
    PDBbind: -logKd/Ki=7.55, Ki=28nM
    1479 1lpz:B (2.4) BS02 CMB 3.4.21.6 GO:0004252 ... P00742 12061878 MOAD: Ki=25nM
    PDBbind: -logKd/Ki=7.60, Ki=25nM
    BindingDB: Ki=25nM
    1480 1lq2:A (2.7) BS01 IDD 3.2.1.21 GO:0004553 ... Q9XEI3 14597633 PDBbind: -logKd/Ki=8.77, Ki=1.7nM
    1481 1lqd:B (2.7) BS02 CMI 3.4.21.6 GO:0004252 ... P00742 12061878 PDBbind: -logKd/Ki=8.05, Ki=9nM
    BindingDB: Ki=9nM
    1482 1lqe:A (2.2) BS02 IMA 3.4.21.4 GO:0004252 ... P00760 12061878 MOAD: Ki=1507nM
    PDBbind: -logKd/Ki=5.82, Ki=1507nM
    1483 1lrr:A (2.65) BS01 dna ? GO:0003677 ... P0AFY8 12379844 PDBbind: Kd=7uM
    1484 1lrr:A (2.65) BS02 dna ? GO:0003677 ... P0AFY8 12379844 PDBbind: Kd=7uM
    1485 1lrr:D (2.65) BS01 dna ? GO:0003677 ... P0AFY8 12379844 PDBbind: Kd=7uM
    1486 1lrr:D (2.65) BS02 dna ? GO:0003677 ... P0AFY8 12379844 PDBbind: Kd=7uM
    1487 1lrt:A (2.2) BS02 TAD 1.1.1.205 GO:0003824 ... P50097 12403633 MOAD: Ki=2.3uM
    PDBbind: -logKd/Ki=5.64, Ki=2.3uM
    1488 1lrt:B (2.2) BS02 TAD 1.1.1.205 GO:0003824 ... P50097 12403633 MOAD: Ki=2.3uM
    PDBbind: -logKd/Ki=5.64, Ki=2.3uM
    1489 1lst:A (1.8) BS01 LYS ? GO:0006865 ... P02911 8496186 PDBbind: -logKd/Ki=7.85, Kd=14nM
    1490 1lt6:D (2.2) BS01 GAA ? GO:0005576 ... P32890 9384564 PDBbind: -logKd/Ki=3.30, IC50=0.5mM
    1491 1lt6:E (2.2) BS01 GAA ? GO:0005576 ... P32890 9384564 PDBbind: -logKd/Ki=3.30, IC50=0.5mM
    1492 1lv8:A (2.3) BS02 9PP 2.4.2.1 GO:0003824 ... P55859 15342253 MOAD: Kd=3.5uM
    PDBbind: -logKd/Ki=5.46, Kd=3.5uM
    1493 1lv8:B (2.3) BS02 9PP 2.4.2.1 GO:0003824 ... P55859 15342253 MOAD: Kd=3.5uM
    PDBbind: -logKd/Ki=5.46, Kd=3.5uM
    1494 1lvc:A (3.6) BS01 DOT 4.6.1.1 GO:0005576 ... P40136 12485993 PDBbind: -logKd/Ki=6.00, Kd=1uM
    1495 1lvk:A (1.9) BS02 MNT ? GO:0003774 ... P08799 9405148 PDBbind: -logKd/Ki=5.92, Kd=1.2uM
    1496 1lvu:A (2.05) BS02 9PP 2.4.2.1 GO:0003824 ... P55859 15342253 MOAD: Kd=4.8uM
    PDBbind: -logKd/Ki=5.32, Kd=4.8uM
    1497 1lvu:B (2.05) BS02 9PP 2.4.2.1 GO:0003824 ... P55859 15342253 MOAD: Kd=4.8uM
    PDBbind: -logKd/Ki=5.32, Kd=4.8uM
    1498 1lxf:C (-1.00) BS03 BEP ? GO:0005509 ... P63316 12060657 PDBbind: -logKd/Ki=4.10, Kd=80uM
    1499 1lyx:A (1.9) BS01 PGA 5.3.1.1 GO:0004807 ... Q07412 12403619 MOAD: Ki=0.029mM
    PDBbind: -logKd/Ki=4.54, Ki=0.029mM
    1500 1lzo:B (2.8) BS01 PGA 5.3.1.1 GO:0004807 ... Q07412 12403619 PDBbind: -logKd/Ki=4.54, Ki=0.029mM
    1501 1lzq:A (2.2) BS01 0ZQ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 12699382 MOAD: Ki=4.1nM
    PDBbind: -logKd/Ki=8.39, Ki=4.1nM
    1502 1lzq:B (2.2) BS01 0ZQ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 12699382 PDBbind: -logKd/Ki=8.39, Ki=4.1nM
    1503 1m0b:A (2.45) BS01 0ZQ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 15560786 PDBbind: -logKd/Ki=8.82, Ki=1.53nM
    1504 1m0b:B (2.45) BS01 0ZQ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 15560786 MOAD: Ki=1.53nM
    PDBbind: -logKd/Ki=8.82, Ki=1.53nM
    1505 1m0n:A (2.2) BS01 HCP 4.1.1.64 GO:0008453 ... P16932 12369820 MOAD: Ki=6mM
    PDBbind: -logKd/Ki=2.22, Ki=6.0mM
    1506 1m0o:A (2.4) BS01 MPM 4.1.1.64 GO:0008453 ... P16932 12369820 MOAD: Ki=4.9mM
    PDBbind: -logKd/Ki=2.31, Ki=4.9mM
    1507 1m0q:A (2.0) BS01 EPC 4.1.1.64 GO:0008453 ... P16932 12369820 MOAD: Ki=1.1mM
    PDBbind: -logKd/Ki=3.89, Ki=0.13mM
    1508 1m13:A (2.15) BS01 HYF ? GO:0003677 ... O75469 12578355 MOAD: Kd=27nM
    PDBbind: -logKd/Ki=7.57, Kd=27nM
    1509 1m18:A (2.45) BS01 dna ? GO:0000786 ... P02302 12559907 PDBbind: Kd=0.6uM
    1510 1m18:A (2.45) BS02 dna ? GO:0000786 ... P02302 12559907 PDBbind: Kd=0.6uM
    1511 1m18:B (2.45) BS01 dna ? GO:0000786 ... P62799 12559907 PDBbind: Kd=0.6uM
    1512 1m18:B (2.45) BS02 dna ? GO:0000786 ... P62799 12559907 PDBbind: Kd=0.6uM
    1513 1m18:C (2.45) BS01 dna ? GO:0000786 ... P06897 12559907 PDBbind: Kd=0.6uM
    1514 1m18:C (2.45) BS02 dna ? GO:0000786 ... P06897 12559907 PDBbind: Kd=0.6uM
    1515 1m18:D (2.45) BS01 dna ? GO:0000786 ... P02281 12559907 PDBbind: Kd=0.6uM
    1516 1m18:D (2.45) BS02 dna ? GO:0000786 ... P02281 12559907 PDBbind: Kd=0.6uM
    1517 1m18:E (2.45) BS01 dna ? GO:0000786 ... P02302 12559907 PDBbind: Kd=0.6uM
    1518 1m18:E (2.45) BS02 dna ? GO:0000786 ... P02302 12559907 PDBbind: Kd=0.6uM
    1519 1m18:F (2.45) BS01 dna ? GO:0000786 ... P62799 12559907 PDBbind: Kd=0.6uM
    1520 1m18:F (2.45) BS02 dna ? GO:0000786 ... P62799 12559907 PDBbind: Kd=0.6uM
    1521 1m18:G (2.45) BS01 dna ? GO:0000786 ... P06897 12559907 PDBbind: Kd=0.6uM
    1522 1m18:G (2.45) BS02 dna ? GO:0000786 ... P06897 12559907 PDBbind: Kd=0.6uM
    1523 1m18:H (2.45) BS01 dna ? GO:0000786 ... P02281 12559907 PDBbind: Kd=0.6uM
    1524 1m18:H (2.45) BS02 dna ? GO:0000786 ... P02281 12559907 PDBbind: Kd=0.6uM
    1525 1m19:A (2.3) BS01 dna ? GO:0000786 ... P02302 12559907 PDBbind: Kd=0.6uM
    1526 1m19:A (2.3) BS02 dna ? GO:0000786 ... P02302 12559907 PDBbind: Kd=0.6uM
    1527 1m19:B (2.3) BS01 dna ? GO:0000786 ... P62799 12559907 PDBbind: Kd=0.6uM
    1528 1m19:B (2.3) BS02 dna ? GO:0000786 ... P62799 12559907 PDBbind: Kd=0.6uM
    1529 1m19:C (2.3) BS01 dna ? GO:0000786 ... P06897 12559907 PDBbind: Kd=0.6uM
    1530 1m19:C (2.3) BS02 dna ? GO:0000786 ... P06897 12559907 PDBbind: Kd=0.6uM
    1531 1m19:D (2.3) BS01 dna ? GO:0000786 ... P02281 12559907 PDBbind: Kd=0.6uM
    1532 1m19:D (2.3) BS02 dna ? GO:0000786 ... P02281 12559907 PDBbind: Kd=0.6uM
    1533 1m19:E (2.3) BS01 dna ? GO:0000786 ... P02302 12559907 PDBbind: Kd=0.6uM
    1534 1m19:E (2.3) BS02 dna ? GO:0000786 ... P02302 12559907 PDBbind: Kd=0.6uM
    1535 1m19:F (2.3) BS01 dna ? GO:0000786 ... P62799 12559907 PDBbind: Kd=0.6uM
    1536 1m19:F (2.3) BS02 dna ? GO:0000786 ... P62799 12559907 PDBbind: Kd=0.6uM
    1537 1m19:G (2.3) BS01 dna ? GO:0000786 ... P06897 12559907 PDBbind: Kd=0.6uM
    1538 1m19:G (2.3) BS02 dna ? GO:0000786 ... P06897 12559907 PDBbind: Kd=0.6uM
    1539 1m19:H (2.3) BS01 dna ? GO:0000786 ... P02281 12559907 PDBbind: Kd=0.6uM
    1540 1m19:H (2.3) BS02 dna ? GO:0000786 ... P02281 12559907 PDBbind: Kd=0.6uM
    1541 1m1a:A (2.65) BS01 dna ? GO:0000786 ... P02302 12559907 PDBbind: Kd=0.6uM
    1542 1m1a:A (2.65) BS02 dna ? GO:0000786 ... P02302 12559907 PDBbind: Kd=0.6uM
    1543 1m1a:B (2.65) BS01 dna ? GO:0000786 ... P62799 12559907 PDBbind: Kd=0.6uM
    1544 1m1a:B (2.65) BS02 dna ? GO:0000786 ... P62799 12559907 PDBbind: Kd=0.6uM
    1545 1m1a:C (2.65) BS01 dna ? GO:0000786 ... P06897 12559907 PDBbind: Kd=0.6uM
    1546 1m1a:C (2.65) BS02 dna ? GO:0000786 ... P06897 12559907 PDBbind: Kd=0.6uM
    1547 1m1a:D (2.65) BS01 dna ? GO:0000786 ... P02281 12559907 PDBbind: Kd=0.6uM
    1548 1m1a:D (2.65) BS02 dna ? GO:0000786 ... P02281 12559907 PDBbind: Kd=0.6uM
    1549 1m1a:E (2.65) BS01 dna ? GO:0000786 ... P02302 12559907 PDBbind: Kd=0.6uM
    1550 1m1a:E (2.65) BS02 dna ? GO:0000786 ... P02302 12559907 PDBbind: Kd=0.6uM
    1551 1m1a:F (2.65) BS01 dna ? GO:0000786 ... P62799 12559907 PDBbind: Kd=0.6uM
    1552 1m1a:F (2.65) BS02 dna ? GO:0000786 ... P62799 12559907 PDBbind: Kd=0.6uM
    1553 1m1a:G (2.65) BS01 dna ? GO:0000786 ... P06897 12559907 PDBbind: Kd=0.6uM
    1554 1m1a:G (2.65) BS02 dna ? GO:0000786 ... P06897 12559907 PDBbind: Kd=0.6uM
    1555 1m1a:H (2.65) BS01 dna ? GO:0000786 ... P02281 12559907 PDBbind: Kd=0.6uM
    1556 1m1a:H (2.65) BS02 dna ? GO:0000786 ... P02281 12559907 PDBbind: Kd=0.6uM
    1557 1m1b:A (2.25) BS02 SPV 5.4.2.9 GO:0003824 ... P56839 12162742 MOAD: Ki=22uM
    PDBbind: -logKd/Ki=4.66, Ki=22uM
    1558 1m2p:A (2.0) BS01 HNA 2.7.11.1 GO:0004672 ... P28523 12419810 PDBbind: -logKd/Ki=6.11, Ki=0.78uM
    BindingDB: Ki=780nM
    1559 1m2q:A (1.79) BS01 MNX 2.7.11.1 GO:0004672 ... P28523 12419810 PDBbind: -logKd/Ki=6.10, Ki=0.80uM
    BindingDB: Ki=800nM
    1560 1m2r:A (1.7) BS01 MNY 2.7.11.1 GO:0004672 ... P28523 12419810 PDBbind: -logKd/Ki=6.46, Ki=0.35uM
    BindingDB: Ki=350nM
    1561 1m2x:A (1.5) BS04 MCO 3.5.2.6 GO:0008270 ... O08498 12684522 MOAD: Ki~85uM
    PDBbind: -logKd/Ki=4.15, Ki=70uM
    1562 1m48:A (1.95) BS01 FRG ? GO:0002250 ... P60568 12582206 MOAD: Kd=8.2uM
    PDBbind: -logKd/Ki=5.09, Kd=8.2uM
    1563 1m51:A (2.25) BS02 TSX 2.7.11.-
    4.1.1.32    		 GO:0000287 ... P35558 14552798 MOAD: ic50=18.8uM
    PDBbind: -logKd/Ki=4.73, IC50=18.8uM
    1564 1m5c:A (1.65) BS01 BRH ? GO:0015276 ... P19491 12215417 MOAD: ic50=0.5uM
    PDBbind: -logKd/Ki=6.30, IC50=0.5uM
    1565 1m5d:A (1.73) BS01 BRH ? GO:0015276 ... P19491 12215417 MOAD: ic50=9.2uM
    PDBbind: -logKd/Ki=5.04, IC50=9.2uM
    1566 1m5w:A (1.96) BS01 DXP 2.6.99.2 GO:0005737 ... P0A794 12269807 MOAD: Kd=54uM
    PDBbind: -logKd/Ki=4.27, Kd=54uM
    1567 1m5w:E (1.96) BS01 DXP 2.6.99.2 GO:0005737 ... P0A794 12269807 MOAD: Kd=54uM
    PDBbind: -logKd/Ki=4.27, Kd=54uM
    1568 1m6p:A (1.8) BS02 M6P ? GO:0005768 ... P11456 9604938 MOAD: Kd=8uM
    PDBbind: -logKd/Ki=5.10, Kd=8uM
    1569 1m74:A (3.0) BS01 ADP 7.4.2.8 GO:0005524 ... P28366 12242434 PDBbind: -logKd/Ki=7.00, Kd=100nM
    1570 1m7d:A (2.3) BS01 MAG ? GO:0046872 ... A2NHM3 12427018 PDBbind: -logKd/Ki=6.23, Kd=0.59uM
    1571 1m7d:B (2.3) BS01 RAE ? GO:0002250 ... P01801 12427018 PDBbind: -logKd/Ki=6.23, Kd=0.59uM
    1572 1m7i:B (2.5) BS01 RAM ? GO:0002250 ... P01801 12427018 PDBbind: -logKd/Ki=5.40, Kd=4.0uM
    1573 1m7q:A (2.4) BS01 DQO 2.7.11.24 GO:0000077 ... Q16539 12482439 MOAD: ic50=2.6nM
    PDBbind: -logKd/Ki=8.59, IC50=2.6nM
    BindingDB: IC50=2.6nM
    1574 1m7y:A (1.6) BS01 PPG 1.4.-.-
    4.4.1.14    		 GO:0003824 ... P37821 12228256 PDBbind: -logKd/Ki=10.96, Kd=0.011nM
    1575 1m83:A (2.2) BS01 ATP 6.1.1.2 GO:0000166 ... P00953 12473451 MOAD: Kd=0.4mM
    PDBbind: -logKd/Ki=3.40, Kd=0.4mM
    1576 1m8w:A (2.2) BS01 rna ? GO:0003723 ... Q14671 12202039 PDBbind: Kd=500nM
    1577 1m8w:A (2.2) BS02 rna ? GO:0003723 ... Q14671 12202039 PDBbind: Kd=500nM
    1578 1m8w:B (2.2) BS01 rna ? GO:0003723 ... Q14671 12202039 PDBbind: Kd=500nM
    1579 1m8w:B (2.2) BS02 rna ? GO:0003723 ... Q14671 12202039 PDBbind: Kd=500nM
    1580 1m8x:A (2.2) BS01 rna ? GO:0003723 ... Q14671 12202039 PDBbind: Kd=500nM
    1581 1m8x:B (2.2) BS01 rna ? GO:0003723 ... Q14671 12202039 PDBbind: Kd=500nM
    1582 1m8y:A (2.6) BS01 rna ? GO:0003723 ... Q14671 12202039 PDBbind: Kd=160nM
    1583 1m8y:B (2.6) BS01 rna ? GO:0003723 ... Q14671 12202039 PDBbind: Kd=160nM
    1584 1m9n:A (1.93) BS02 XMP 2.1.2.3
    3.5.4.10    		 GO:0003824 ... P31335 12501179 MOAD: Ki=0.12uM
    PDBbind: -logKd/Ki=6.92, Ki=0.12uM
    1585 1m9n:B (1.93) BS03 XMP 2.1.2.3
    3.5.4.10    		 GO:0003824 ... P31335 12501179 MOAD: Ki=0.12uM
    PDBbind: -logKd/Ki=6.92, Ki=0.12uM
    1586 1ma7:A (2.3) BS01 dna ? GO:0003677 ... P06956 12779336 PDBbind: Kd=146nM
    1587 1ma7:A (2.3) BS02 dna ? GO:0003677 ... P06956 12779336 PDBbind: Kd=146nM
    1588 1ma7:B (2.3) BS01 dna ? GO:0003677 ... P06956 12779336 PDBbind: Kd=146nM
    1589 1ma7:B (2.3) BS02 dna ? GO:0003677 ... P06956 12779336 PDBbind: Kd=146nM
    1590 1mai:A (1.9) BS01 I3P 3.1.4.11 GO:0035556 ... P10688 8521504 MOAD: Kd=210nM
    PDBbind: -logKd/Ki=6.68, Kd=210nM
    1591 1mau:A (2.15) BS01 ATP 6.1.1.2 GO:0000166 ... P00953 12473451 PDBbind: -logKd/Ki=11.30, Kd=5pM
    1592 1maw:A (3.0) BS01 ATP 6.1.1.2 GO:0000166 ... P00953 12473451 PDBbind: -logKd/Ki=1.10, Kd=80mM
    1593 1mcz:A (2.8) BS04 RMN 4.1.1.7 GO:0000287 ... P20906 12590569 PDBbind: -logKd/Ki=3.00, Ki=1mM
    1594 1mcz:A (2.8) BS06 RMN 4.1.1.7 GO:0000287 ... P20906 12590569 PDBbind: -logKd/Ki=3.00, Ki=1mM
    1595 1mcz:B (2.8) BS03 RMN 4.1.1.7 GO:0000287 ... P20906 12590569 PDBbind: -logKd/Ki=3.00, Ki=1mM
    1596 1mcz:B (2.8) BS06 RMN 4.1.1.7 GO:0000287 ... P20906 12590569 PDBbind: -logKd/Ki=3.00, Ki=1mM
    1597 1mdl:A (1.85) BS02 RMN 5.1.2.2 GO:0000287 ... P11444 7893690 PDBbind: -logKd/Ki=3.09, Ki=810uM
    BindingDB: Ki=810000nM
    1598 1mdm:A (2.8) BS01 dna ? GO:0003677 ... Q02548 12221090 PDBbind: Kd=35pM
    1599 1mdm:A (2.8) BS02 dna ? GO:0003677 ... Q02548 12221090 PDBbind: Kd=35pM
    1600 1mdm:B (2.8) BS01 dna ? GO:0003700 ... P27577 12221090 PDBbind: Kd=35pM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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