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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    14401 4lxb:H (1.61) BS03 7R9 3.4.21.5 GO:0004252 ... P00734 24175584 MOAD: ic50=7nM
    PDBbind: -logKd/Ki=8.15, IC50=7nM
    14402 4lxd:A (1.9) BS01 1XV ? GO:0042981 ... P10415 23291630 PDBbind: -logKd/Ki=7.23, Ki=59nM
    BindingDB: Ki=59nM
    14403 4lxk:A (2.05) BS01 1YT 3.4.23.46 GO:0004190 ... P56817 23981898 MOAD: ic50=0.004uM
    PDBbind: -logKd/Ki=8.40, IC50=4nM
    14404 4lxm:A (2.3) BS01 1YU 3.4.23.46 GO:0004190 ... P56817 23981898 MOAD: ic50=0.088uM
    PDBbind: -logKd/Ki=7.06, IC50=0.088uM
    14405 4lxz:A (1.85) BS03 SHH 3.5.1.-
    3.5.1.98    		 GO:0004407 ... Q92769 23897821 MOAD: Kd=0.182uM
    PDBbind: -logKd/Ki=6.74, Kd=0.182uM
    BindingDB: IC50=921nM, Kd=182nM, Ki=40nM
    14406 4ly1:A (1.57) BS03 20Y 3.5.1.-
    3.5.1.98    		 GO:0004407 ... Q92769 23897821 MOAD: Kd=0.0552uM
    PDBbind: -logKd/Ki=7.26, Kd=0.0552uM
    BindingDB: IC50=100nM, Ki=1.5nM, Kd=55.2nM
    14407 4ly9:A (2.35) BS02 1YY ? GO:0004857 ... Q14397 24226772 MOAD: Kd=0.007uM
    PDBbind: -logKd/Ki=8.15, Kd=7nM
    BindingDB: IC50=21nM
    14408 4lyn:A (2.0) BS01 1YG 2.7.11.22 GO:0000082 ... P24941 12190313 PDBbind: -logKd/Ki=7.22, IC50=0.06uM
    BindingDB: IC50=60nM
    14409 4lys:A (1.83) BS01 2SJ ? N/A O60885 24272870 PDBbind: -logKd/Ki=4.34, Kd=46uM
    14410 4lyw:A (1.95) BS01 21Q ? N/A O60885 24272870 MOAD: Kd=237nM
    PDBbind: -logKd/Ki=6.63, Kd=237nM
    BindingDB: Kd=240nM
    14411 4lzr:A (1.85) BS01 LOC ? N/A O60885 24272870 MOAD: Kd=20uM
    PDBbind: -logKd/Ki=4.70, Kd=20uM
    14412 4lzs:A (2.2) BS01 L46 ? N/A O60885 24272870 MOAD: Kd=16uM
    PDBbind: -logKd/Ki=4.80, Kd=16uM
    BindingDB: Kd=6800nM
    14413 4m0e:A (2.0) BS01 1YL 3.1.1.7 GO:0001507 ... P22303 24900610 MOAD: Ki=0.7uM
    PDBbind: -logKd/Ki=6.22, Ki=0.6uM
    BindingDB: Ki=600nM, IC50=1000nM
    14414 4m0f:A (2.304) BS01 1YK 3.1.1.7 GO:0001507 ... P22303 24900610 MOAD: Ki=1.7nM
    PDBbind: -logKd/Ki=8.77, Ki=1.7nM
    BindingDB: Ki=1.7nM, IC50=8nM
    14415 4m0r:A (1.96) BS01 644 2.4.2.18 GO:0000162 ... P9WFX5 24623674 MOAD: Ki=6.2uM
    PDBbind: -logKd/Ki=5.21, Ki=6.2uM
    14416 4m0y:A (1.7) BS01 M0Y 2.7.10.2 GO:0004672 ... Q08881 24593284 MOAD: Kd=0.35uM
    PDBbind: -logKd/Ki=6.46, Kd=0.35uM
    14417 4m0y:A (1.7) BS02 M0Y 2.7.10.2 GO:0004672 ... Q08881 24593284 MOAD: Kd=0.35uM
    PDBbind: -logKd/Ki=6.46, Kd=0.35uM
    14418 4m0z:A (2.0) BS01 M0Z 2.7.10.2 GO:0004672 ... Q08881 24593284 MOAD: Kd=6.4uM
    PDBbind: -logKd/Ki=5.19, Kd=6.4uM
    14419 4m0z:A (2.0) BS02 M0Z 2.7.10.2 GO:0004672 ... Q08881 24593284 MOAD: Kd=6.4uM
    PDBbind: -logKd/Ki=5.19, Kd=6.4uM
    14420 4m12:A (2.15) BS01 1YZ 2.7.10.2 GO:0004672 ... Q08881 24593284 MOAD: Kd=0.9uM
    PDBbind: -logKd/Ki=6.05, Kd=0.9uM
    14421 4m13:A (1.85) BS01 1E0 2.7.10.2 GO:0004672 ... Q08881 24593284 MOAD: Kd=0.2uM
    PDBbind: -logKd/Ki=6.70, Kd=0.2uM
    14422 4m14:A (1.55) BS01 QWS 2.7.10.2 GO:0004672 ... Q08881 24593284 PDBbind: -logKd/Ki=6.70, Kd=0.2uM
    14423 4m14:A (1.55) BS02 QWS 2.7.10.2 GO:0004672 ... Q08881 24593284 PDBbind: -logKd/Ki=6.70, Kd=0.2uM
    14424 4m1j:C (1.8) BS01 B0S 3.5.1.97 GO:0016787 ... Q9I194 23883096 PDBbind: -logKd/Ki=9.70, Ki=0.20nM
    14425 4m2r:A (1.993) BS02 BZ1 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 24090602 MOAD: Ki=3.2nM
    PDBbind: -logKd/Ki=8.49, Ki=3.2nM
    BindingDB: Ki=3nM, IC50=3.2nM, Kd=0.13nM
    14426 4m2u:A (1.999) BS02 ETS 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 24090602 MOAD: Ki=9.1nM
    PDBbind: -logKd/Ki=8.04, Ki=9.1nM
    BindingDB: Ki=9nM, IC50=26.61nM, Kd=0.043000nM
    14427 4m2v:A (1.718) BS02 BZ1 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 24090602 PDBbind: -logKd/Ki=7.44, Ki=36nM
    BindingDB: Ki=3nM, IC50=3.2nM, Kd=0.13nM
    14428 4m2w:A (1.658) BS02 ETS 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 24090602 PDBbind: -logKd/Ki=7.28, Ki=52nM
    BindingDB: Ki=9nM, IC50=26.61nM, Kd=0.043000nM
    14429 4m3b:A (2.001) BS01 2B2 ? GO:0000976 ... P9WMC1 24818704 MOAD: ic50=0.4uM
    PDBbind: -logKd/Ki=6.40, IC50=0.40uM
    14430 4m3d:A (1.9) BS01 2H2 ? GO:0000976 ... P9WMC1 24818704 MOAD: ic50=3.9uM
    PDBbind: -logKd/Ki=5.41, IC50=3.9uM
    14431 4m3e:A (2.109) BS01 2B3 ? GO:0000976 ... P9WMC1 24818704 MOAD: ic50=0.56uM
    PDBbind: -logKd/Ki=6.25, IC50=0.56uM
    14432 4m3f:A (2.0) BS01 2D1 ? GO:0000976 ... P9WMC1 24818704 MOAD: ic50=4.9uM
    PDBbind: -logKd/Ki=5.31, IC50=4.9uM
    14433 4m3g:A (2.3) BS01 2G1 ? GO:0000976 ... P9WMC1 24818704 MOAD: ic50=0.55uM
    PDBbind: -logKd/Ki=6.26, IC50=0.55uM
    14434 4m3m:A (2.1) BS01 22N 3.2.1.18 GO:0004308 ... Q07599 24425043 PDBbind: -logKd/Ki=9.05, IC50=0.9nM
    14435 4m3q:A (2.718) BS02 24K 2.7.10.1 GO:0004672 ... Q12866 24195762 PDBbind: -logKd/Ki=7.77, IC50=17nM
    BindingDB: IC50=55nM
    14436 4m48:A (2.955) BS03 21B ? GO:0016020 ... Q7K4Y6 24037379 PDBbind: -logKd/Ki=6.81, Ki=156nM
    14437 4m4q:A (2.502) BS03 21A N/A GO:0003723 ... N/A 23978130 MOAD: ic50=0.011uM
    PDBbind: -logKd/Ki=7.96, IC50=11nM
    14438 4m59:A (2.46) BS01 rna ? GO:0003723 ... B8Y6I0 24162847 PDBbind: Kd=102nM
    14439 4m59:A (2.46) BS02 rna ? GO:0003723 ... B8Y6I0 24162847 PDBbind: Kd=102nM
    14440 4m59:B (2.46) BS01 rna ? GO:0003723 ... B8Y6I0 24162847 PDBbind: Kd=102nM
    14441 4m59:B (2.46) BS02 rna ? GO:0003723 ... B8Y6I0 24162847 PDBbind: Kd=102nM
    14442 4m5g:A (1.31) BS02 YH1 2.7.6.3 GO:0000287 ... P26281 24613625 MOAD: Kd=9.7uM
    PDBbind: -logKd/Ki=5.01, Kd=9.7uM
    14443 4m5h:A (1.11) BS02 YH2 2.7.6.3 GO:0000287 ... P26281 24613625 MOAD: Kd=29uM
    PDBbind: -logKd/Ki=4.54, Kd=29uM
    14444 4m5i:A (1.08) BS05 YH6 2.7.6.3 GO:0000287 ... P26281 24613625 MOAD: Kd=6.7uM
    PDBbind: -logKd/Ki=5.17, Kd=6.7uM
    BindingDB: IC50=64000nM, Kd=6700nM
    14445 4m5j:A (1.696) BS02 YH5 2.7.6.3 GO:0000287 ... P26281 24613625 MOAD: Kd=14.5uM
    PDBbind: -logKd/Ki=4.84, Kd=14.5uM
    BindingDB: IC50=44000nM, Kd=14500nM
    14446 4m5k:A (1.296) BS05 YH3 2.7.6.3 GO:0000287 ... P26281 24613625 MOAD: Kd=5.9uM
    PDBbind: -logKd/Ki=5.23, Kd=5.9uM
    14447 4m5l:A (1.094) BS05 YH4 2.7.6.3 GO:0000287 ... P26281 24613625 MOAD: Kd=18.9uM
    PDBbind: -logKd/Ki=4.72, Kd=18.9uM
    BindingDB: Kd=18900nM, IC50=243000nM
    14448 4m5m:A (1.118) BS01 DX4 2.7.6.3 GO:0000287 ... P26281 24613625 MOAD: Kd=18uM
    PDBbind: -logKd/Ki=4.74, Kd=18uM
    14449 4m5n:A (2.0) BS04 YH7 2.7.6.3 GO:0000287 ... P26281 24613625 MOAD: Kd=7.5uM
    PDBbind: -logKd/Ki=5.12, Kd=7.5uM
    14450 4m5o:A (2.0) BS03 X48 N/A GO:0003723 ... N/A 23978130 MOAD: ic50=0.38uM
    PDBbind: -logKd/Ki=6.42, IC50=0.38uM
    14451 4m5o:A (2.0) BS04 X48 N/A GO:0003723 ... N/A 23978130 MOAD: ic50=0.38uM
    PDBbind: -logKd/Ki=6.42, IC50=0.38uM
    14452 4m5o:A (2.0) BS05 X48 N/A GO:0003723 ... N/A 23978130 MOAD: ic50=0.38uM
    PDBbind: -logKd/Ki=6.42, IC50=0.38uM
    14453 4m5r:A (1.4) BS02 MSR N/A GO:0003723 ... N/A 23978130 MOAD: ic50=1000uM
    PDBbind: -logKd/Ki=3.00, IC50=1000uM
    14454 4m5r:A (1.4) BS03 MSR N/A GO:0003723 ... N/A 23978130 MOAD: ic50=1000uM
    PDBbind: -logKd/Ki=3.00, IC50=1000uM
    14455 4m5u:A (2.2) BS03 20F N/A GO:0003723 ... N/A 24055080 MOAD: ic50=0.023uM
    PDBbind: -logKd/Ki=7.96, IC50=11nM
    14456 4m6p:A (1.75) BS01 20R 2.4.2.12 GO:0005125 ... P43490 24021463 MOAD: ic50=0.054uM
    PDBbind: -logKd/Ki=7.27, IC50=54nM
    14457 4m6p:A (1.75) BS02 20R 2.4.2.12 GO:0005125 ... P43490 24021463 MOAD: ic50=0.054uM
    PDBbind: -logKd/Ki=7.27, IC50=54nM
    14458 4m6p:B (1.75) BS01 20R 2.4.2.12 GO:0005125 ... P43490 24021463 MOAD: ic50=0.054uM
    PDBbind: -logKd/Ki=7.27, IC50=54nM
    14459 4m6q:A (2.406) BS01 20T 2.4.2.12 GO:0005125 ... P43490 24021463 MOAD: ic50=0.0061uM
    PDBbind: -logKd/Ki=8.21, IC50=6.1nM
    14460 4m6q:A (2.406) BS03 20T 2.4.2.12 GO:0005125 ... P43490 24021463 MOAD: ic50=0.0061uM
    PDBbind: -logKd/Ki=8.21, IC50=6.1nM
    14461 4m6q:B (2.406) BS01 20T 2.4.2.12 GO:0005125 ... P43490 24021463 MOAD: ic50=0.0061uM
    PDBbind: -logKd/Ki=8.21, IC50=6.1nM
    14462 4m6q:B (2.406) BS02 20T 2.4.2.12 GO:0005125 ... P43490 24021463 MOAD: ic50=0.0061uM
    PDBbind: -logKd/Ki=8.21, IC50=6.1nM
    14463 4m6u:A (1.8) BS02 TTN 5.1.2.2 GO:0000287 ... P11444 24472022 PDBbind: -logKd/Ki=2.74, Ki=1.8mM
    14464 4m6u:B (1.8) BS02 TTN 5.1.2.2 GO:0000287 ... P11444 24472022 PDBbind: -logKd/Ki=2.74, Ki=1.8mM
    14465 4m7b:A (1.95) BS02 28C 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 24527792 MOAD: ic50=200nM
    PDBbind: -logKd/Ki=6.70, IC50=0.2uM
    BindingDB: IC50=200nM
    14466 4m7j:H (1.95) BS01 KDA N/A N/A N/A 24682362 PDBbind: -logKd/Ki=6.11, Kd=0.781uM
    14467 4m7x:A (1.42) BS02 27Q 2.7.1.33 GO:0004594 ... Q8NVG0 27759386 PDBbind: -logKd/Ki=4.80, IC50=15.7uM
    14468 4m7y:A (1.8) BS01 2GH 2.7.1.33 GO:0004594 ... Q8NVG0 27759386 PDBbind: -logKd/Ki=5.32, IC50=4.8uM
    14469 4m7y:A (1.8) BS03 2GH 2.7.1.33 GO:0004594 ... Q8NVG0 27759386 PDBbind: -logKd/Ki=5.32, IC50=4.8uM
    14470 4m7y:B (1.8) BS01 2GH 2.7.1.33 GO:0004594 ... Q8NVG0 27759386 PDBbind: -logKd/Ki=5.32, IC50=4.8uM
    14471 4m7y:B (1.8) BS02 2GH 2.7.1.33 GO:0004594 ... Q8NVG0 27759386 PDBbind: -logKd/Ki=5.32, IC50=4.8uM
    14472 4m84:A (1.998) BS01 21E 2.7.11.17 GO:0004672 ... Q9BJF5 24494061 MOAD: ic50=0.049uM
    PDBbind: -logKd/Ki=7.31, IC50=49nM
    BindingDB: IC50=49.0nM
    14473 4m8b:R (2.61) BS01 dna ? N/A P38867 24994900 PDBbind: Kd=2.2uM
    14474 4m8b:R (2.61) BS02 dna ? N/A P38867 24994900 PDBbind: Kd=2.2uM
    14475 4m8e:A (2.4) BS02 29V ? GO:0003677 ... P19793 24359708 MOAD: Kd=13nM
    PDBbind: -logKd/Ki=7.89, Kd=13nM
    14476 4m8h:A (2.2) BS02 R4M ? GO:0003677 ... P19793 24359708 MOAD: Kd=25nM
    PDBbind: -logKd/Ki=7.60, Kd=25nM
    14477 4m8t:A (3.0) BS01 RMM 2.7.11.1 GO:0004672 ... P18654 25344815 PDBbind: -logKd/Ki=6.43, IC50=0.37uM
    14478 4m8x:A (2.05) BS01 KGQ 3.1.26.13 GO:0004190 ... Q90JJ9 24371077 PDBbind: -logKd/Ki=10.20, Ki=0.063nM
    14479 4m8x:A (2.05) BS02 KGQ 3.1.26.13 GO:0004190 ... Q90JJ9 24371077 PDBbind: -logKd/Ki=10.20, Ki=0.063nM
    14480 4m8x:B (2.05) BS01 KGQ 3.1.26.13 GO:0004190 ... Q90JJ9 24371077 MOAD: Ki=0.063nM
    PDBbind: -logKd/Ki=10.20, Ki=0.063nM
    14481 4m8x:B (2.05) BS02 KGQ 3.1.26.13 GO:0004190 ... Q90JJ9 24371077 MOAD: Ki=0.063nM
    PDBbind: -logKd/Ki=10.20, Ki=0.063nM
    14482 4m8y:A (2.22) BS01 KGQ 3.1.26.13 GO:0004190 ... Q90JJ9 24371077 MOAD: Ki=0.11nM
    PDBbind: -logKd/Ki=9.96, Ki=0.11nM
    14483 4m8y:A (2.22) BS02 KGQ 3.1.26.13 GO:0004190 ... Q90JJ9 24371077 MOAD: Ki=0.11nM
    PDBbind: -logKd/Ki=9.96, Ki=0.11nM
    14484 4m8y:B (2.22) BS01 KGQ 3.1.26.13 GO:0004190 ... Q90JJ9 24371077 PDBbind: -logKd/Ki=9.96, Ki=0.11nM
    14485 4m8y:B (2.22) BS02 KGQ 3.1.26.13 GO:0004190 ... Q90JJ9 24371077 PDBbind: -logKd/Ki=9.96, Ki=0.11nM
    14486 4m9e:A (1.851) BS01 dna ? N/A Q60793 24520114 PDBbind: Kd=30nM
    14487 4m9e:A (1.851) BS02 dna ? N/A Q60793 24520114 PDBbind: Kd=30nM
    14488 4m9v:C (0.969) BS01 dna ? N/A Q8C6P8 24236546 PDBbind: Kd=7nM
    14489 4m9v:C (0.969) BS02 dna ? N/A Q8C6P8 24236546 PDBbind: Kd=7nM
    14490 4m9v:F (0.969) BS01 dna ? N/A Q8C6P8 24236546 PDBbind: Kd=7nM
    14491 4m9v:F (0.969) BS02 dna ? N/A Q8C6P8 24236546 PDBbind: Kd=7nM
    14492 4man:A (2.07) BS01 1Y1 ? GO:0042981 ... P10415 23291630 PDBbind: -logKd/Ki=11.00, Ki<0.01nM
    BindingDB: Ki=<0.100000nM
    14493 4mao:A (2.6) BS01 28D 2.7.11.1 GO:0004672 ... P18654 25153195 PDBbind: -logKd/Ki=7.33, IC50=47nM
    14494 4mb9:A (1.85) BS01 28F N/A GO:0003677 ... N/A 24088190 PDBbind: -logKd/Ki=8.00, IC50=10nM
    14495 4mbc:A (1.75) BS01 28G N/A GO:0003677 ... N/A 24088190 PDBbind: -logKd/Ki=6.40, IC50=400nM
    14496 4mbf:A (1.54) BS03 2AW 3.5.2.6 GO:0008800 ... P0AD64 24454944 PDBbind: -logKd/Ki=5.77, Ki=1.7uM
    14497 4mbf:A (1.54) BS04 2AW 3.5.2.6 GO:0008800 ... P0AD64 24454944 PDBbind: -logKd/Ki=5.77, Ki=1.7uM
    14498 4mbi:A (2.3) BS01 26K 2.7.11.1 GO:0004672 ... P11309 24091081 PDBbind: -logKd/Ki=8.15, IC50=7nM
    BindingDB: IC50=7.0nM
    14499 4mbj:A (3.6) BS01 DFS 2.7.11.1 GO:0004672 ... P15056 24042006 PDBbind: -logKd/Ki=7.21, IC50=61nM
    14500 4mbl:A (2.6) BS01 26L 2.7.11.1 GO:0004672 ... P11309 24091081 PDBbind: -logKd/Ki=8.54, IC50=2.9nM
    BindingDB: IC50=2.9nM
    14501 4mc1:A (1.39) BS01 526 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P0C6F2 N/A PDBbind: -logKd/Ki=7.85, Ki=14nM
    14502 4mc1:A (1.39) BS02 526 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P0C6F2 N/A PDBbind: -logKd/Ki=7.85, Ki=14nM
    14503 4mc1:B (1.39) BS01 526 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P0C6F2 N/A PDBbind: -logKd/Ki=7.85, Ki=14nM
    14504 4mc1:B (1.39) BS02 526 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P0C6F2 N/A PDBbind: -logKd/Ki=7.85, Ki=14nM
    14505 4mc2:A (1.56) BS01 525 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P0C6F2 N/A PDBbind: -logKd/Ki=8.19, Ki=6.4nM
    14506 4mc2:A (1.56) BS02 525 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P0C6F2 N/A PDBbind: -logKd/Ki=8.19, Ki=6.4nM
    14507 4mc2:B (1.56) BS01 525 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P0C6F2 N/A PDBbind: -logKd/Ki=8.19, Ki=6.4nM
    14508 4mc2:B (1.56) BS02 525 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P0C6F2 N/A PDBbind: -logKd/Ki=8.19, Ki=6.4nM
    14509 4mc6:A (1.31) BS01 23K 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P0C6F2 N/A PDBbind: -logKd/Ki=9.59, Ki=0.26nM
    14510 4mc6:B (1.31) BS01 23K 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P0C6F2 N/A PDBbind: -logKd/Ki=9.59, Ki=0.26nM
    14511 4mc9:A (1.19) BS01 23L 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P0C6F2 N/A PDBbind: -logKd/Ki=9.44, Ki=0.36nM
    14512 4mc9:A (1.19) BS02 23L 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P0C6F2 N/A PDBbind: -logKd/Ki=9.44, Ki=0.36nM
    14513 4mc9:B (1.19) BS01 23L 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P0C6F2 N/A PDBbind: -logKd/Ki=9.44, Ki=0.36nM
    14514 4mc9:B (1.19) BS02 23L 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P0C6F2 N/A PDBbind: -logKd/Ki=9.44, Ki=0.36nM
    14515 4mcb:A (1.94) BS01 21W 2.1.1.228 GO:0002939 ... P43912 23981144 MOAD: ic50=1.5uM
    PDBbind: -logKd/Ki=5.82, IC50=1.5uM
    14516 4mcb:B (1.94) BS01 21W 2.1.1.228 GO:0002939 ... P43912 23981144 MOAD: ic50=1.5uM
    PDBbind: -logKd/Ki=5.82, IC50=1.5uM
    14517 4mcb:B (1.94) BS02 21W 2.1.1.228 GO:0002939 ... P43912 23981144 MOAD: ic50=1.5uM
    PDBbind: -logKd/Ki=5.82, IC50=1.5uM
    14518 4mcc:A (1.95) BS01 21X 2.1.1.228 GO:0002939 ... P43912 23981144 MOAD: ic50=0.56uM
    PDBbind: -logKd/Ki=6.25, IC50=0.56uM
    14519 4mcc:B (1.95) BS01 21X 2.1.1.228 GO:0002939 ... P43912 23981144 MOAD: ic50=0.56uM
    PDBbind: -logKd/Ki=6.25, IC50=0.56uM
    14520 4mcd:A (1.55) BS01 22L 2.1.1.228 GO:0002939 ... P43912 23981144 MOAD: ic50=4.7uM
    PDBbind: -logKd/Ki=5.33, IC50=4.7uM
    14521 4mcv:A (2.73) BS01 29K 2.7.10.2 GO:0004672 ... P00523 24171479 PDBbind: -logKd/Ki=8.89, IC50=1.3nM
    14522 4md6:A (2.0) BS01 24E 3.1.4.35 GO:0004114 ... O76074 24565909 MOAD: ic50=17nM
    PDBbind: -logKd/Ki=7.77, IC50=17nM
    BindingDB: IC50=17nM
    14523 4mdn:A (1.905) BS01 Y30 2.3.2.27 GO:0005634 ... Q00987 24207125 MOAD: Ki=0.6uM
    PDBbind: -logKd/Ki=6.22, Ki=0.6uM
    BindingDB: Ki=600nM
    14524 4mdq:A (2.119) BS01 28W 2.3.2.27 GO:0005634 ... Q00987 24207125 MOAD: Ki=1.2uM
    PDBbind: -logKd/Ki=5.92, Ki=1.2uM
    BindingDB: Ki=1200nM
    14525 4mdq:A (2.119) BS02 28W 2.3.2.27 GO:0005634 ... Q00987 24207125 MOAD: Ki=1.2uM
    PDBbind: -logKd/Ki=5.92, Ki=1.2uM
    BindingDB: Ki=1200nM
    14526 4mds:A (1.598) BS01 23H 2.7.7.50
    3.4.19.12
    3.4.22.-
    3.4.22.69    		 GO:0008233 ... P0C6U8 24080461 MOAD: ic50=6.2uM
    PDBbind: -logKd/Ki=5.21, IC50=6.2uM
    14527 4mdt:A (2.59) BS02 24G N/A GO:0008759 ... N/A 24108127 PDBbind: -logKd/Ki=5.00, Kd<10uM
    14528 4mdx:A (1.5) BS01 rna 3.1.27.- GO:0003677 ... P96622 24120662 PDBbind: Kd=64nM
    14529 4mdx:B (1.5) BS01 rna 3.1.27.- GO:0003677 ... P96622 24120662 PDBbind: Kd=64nM
    14530 4men:A (1.81) BS01 25K ? N/A O60885 24090311 PDBbind: -logKd/Ki=3.90, IC50=125uM
    14531 4meo:A (1.72) BS01 25V ? N/A O60885 24090311 PDBbind: -logKd/Ki=3.60, IC50=250uM
    BindingDB: IC50=42000nM
    14532 4mep:A (1.85) BS01 24Y ? N/A O60885 24090311 MOAD: ic50=4.7uM
    PDBbind: -logKd/Ki=5.33, IC50=4.7uM
    14533 4meq:A (1.77) BS01 25O ? N/A O60885 24090311 PDBbind: -logKd/Ki=3.60, IC50=250uM
    14534 4mf0:A (2.67) BS01 29Z 2.7.10.2 GO:0004672 ... Q08881 24138940 PDBbind: -logKd/Ki=8.08, Ki=8.4nM
    BindingDB: Ki=8.4nM, IC50=10000nM
    14535 4mf0:A (2.67) BS02 29Z 2.7.10.2 GO:0004672 ... Q08881 24138940 PDBbind: -logKd/Ki=8.08, Ki=8.4nM
    BindingDB: Ki=8.4nM, IC50=10000nM
    14536 4mf0:B (2.67) BS01 29Z 2.7.10.2 GO:0004672 ... Q08881 24138940 PDBbind: -logKd/Ki=8.08, Ki=8.4nM
    BindingDB: Ki=8.4nM, IC50=10000nM
    14537 4mf1:A (2.113) BS01 29Y 2.7.10.2 GO:0004672 ... Q08881 24138940 MOAD: Ki=0.7nM
    PDBbind: -logKd/Ki=9.15, Ki=0.7nM
    BindingDB: Ki=0.600000nM, IC50=91nM
    14538 4mfe:A (2.61) BS02 3PY 6.4.1.1 GO:0003824 ... Q2K340 24157795 PDBbind: -logKd/Ki=2.27, Ki=5.4mM
    14539 4mg5:A (2.05) BS02 27E ? N/A P03372 25260197 PDBbind: -logKd/Ki=5.34, Kd=4.53uM
    14540 4mg6:A (2.1) BS02 27G ? N/A P03372 25260197 PDBbind: -logKd/Ki=5.62, Kd=2.42uM
    14541 4mg7:A (2.15) BS02 27H ? N/A P03372 25260197 PDBbind: -logKd/Ki=6.36, Kd=0.44uM
    BindingDB: IC50=33nM
    14542 4mg8:A (1.85) BS02 27J ? N/A P03372 25260197 PDBbind: -logKd/Ki=6.48, Kd=0.33uM
    14543 4mg9:A (2.0) BS02 27K ? N/A P03372 25260197 PDBbind: -logKd/Ki=5.68, Kd=2.11uM
    BindingDB: IC50=1420nM
    14544 4mga:A (1.8) BS02 27L ? N/A P03372 25260197 PDBbind: -logKd/Ki=5.86, Kd=1.37uM
    14545 4mgb:A (1.85) BS02 XDH ? N/A P03372 25260197 PDBbind: -logKd/Ki=5.44, Kd=3.67uM
    14546 4mgc:A (2.15) BS02 27M ? N/A P03372 25260197 PDBbind: -logKd/Ki=6.32, Kd=0.48uM
    14547 4mgd:A (1.9) BS02 27N ? N/A P03372 25260197 PDBbind: -logKd/Ki=4.69, Kd=20.19uM
    BindingDB: EC50=31nM, IC50=43nM
    14548 4mgv:A (1.72) BS01 D5I 5.2.1.8 GO:0003755 ... A5K8X6 24900611 PDBbind: -logKd/Ki=7.12, IC50=75nM
    14549 4mh7:A (2.51) BS02 MH7 2.7.10.1 GO:0004672 ... Q12866 24219778 PDBbind: -logKd/Ki=5.23, IC50=5.9uM
    BindingDB: IC50=5900nM
    14550 4mha:A (2.59) BS01 4MH 2.7.10.1 GO:0004672 ... Q12866 24219778 PDBbind: -logKd/Ki=8.28, IC50=0.0052uM
    BindingDB: IC50=5.2nM
    14551 4mhg:A (2.199) BS01 dna ? GO:0003700 ... P97360 24333486 PDBbind: Kd=10uM
    14552 4mhg:A (2.199) BS02 dna ? GO:0003700 ... P97360 24333486 PDBbind: Kd=10uM
    14553 4mho:A (2.0) BS01 26M 2.4.1.1 GO:0000166 ... P00489 25092521 MOAD: Ki=8.25uM
    PDBbind: -logKd/Ki=5.08, Ki=8.25uM
    BindingDB: Ki=8250nM
    14554 4mhs:A (2.0) BS01 26Q 2.4.1.1 GO:0000166 ... P00489 25092521 MOAD: Ki=5.14uM
    PDBbind: -logKd/Ki=5.29, Ki=5.14uM
    BindingDB: Ki=5140nM
    14555 4mhy:A (1.38) BS02 PBD 2.3.2.5 GO:0005576 ... B7QK46 24598748 PDBbind: -logKd/Ki=6.47, Ki=0.342uM
    14556 4mhz:A (1.95) BS01 PBD 2.3.2.5 GO:0005576 ... B7QK46 24598748 PDBbind: -logKd/Ki=6.87, Ki=0.134uM
    14557 4mi3:A (2.15) BS01 26R 2.4.1.1 GO:0000166 ... P00489 25092521 MOAD: Ki=75.29uM
    PDBbind: -logKd/Ki=4.12, Ki=75.29uM
    14558 4mi6:A (1.9) BS01 26V 2.4.1.1 GO:0000166 ... P00489 25092521 MOAD: Ki=48.68uM
    PDBbind: -logKd/Ki=4.31, Ki=48.68uM
    BindingDB: Ki=48680nM
    14559 4mi9:A (1.85) BS01 26W 2.4.1.1 GO:0000166 ... P00489 25092521 MOAD: Ki=376.87uM
    PDBbind: -logKd/Ki=3.42, Ki=376.87uM
    BindingDB: Ki=376870nM
    14560 4mib:A (2.3) BS01 28M 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 24195700 MOAD: ic50=0.2nM
    PDBbind: -logKd/Ki=9.70, IC50=0.2nM
    14561 4mic:A (2.45) BS01 26Y 2.4.1.1 GO:0000166 ... P00489 25092521 MOAD: Ki=4.98uM
    PDBbind: -logKd/Ki=5.30, Ki=4.98uM
    BindingDB: Ki=4980nM
    14562 4mjo:A (2.4) BS01 2C1 3.1.3.11 GO:0000122 ... P09467 24128068 MOAD: Kd=0.6uM
    PDBbind: -logKd/Ki=6.22, Kd=0.60uM
    BindingDB: IC50=80nM
    14563 4mjo:C (2.4) BS01 2C1 3.1.3.11 GO:0000122 ... P09467 24128068 MOAD: Kd=0.6uM
    PDBbind: -logKd/Ki=6.22, Kd=0.60uM
    BindingDB: IC50=80nM
    14564 4mjp:B (1.855) BS01 27O 2.7.7.7 GO:0003677 ... P0A988 24631121 MOAD: Ki=131uM
    PDBbind: -logKd/Ki=3.88, Ki=131uM
    14565 4mjq:A (1.73) BS01 27R 2.7.7.7 GO:0003677 ... P0A988 24631121 MOAD: Ki=193uM
    PDBbind: -logKd/Ki=3.71, Ki=193uM
    14566 4mjr:A (1.62) BS01 0LA 2.7.7.7 GO:0003677 ... P0A988 24631121 MOAD: Ki=283uM
    PDBbind: -logKd/Ki=3.55, Ki=283uM
    14567 4mk0:A (2.4) BS01 29X 2.7.11.15 GO:0001664 ... P25098 24220010 MOAD: ic50=6.3uM
    PDBbind: -logKd/Ki=5.20, IC50=6.3uM
    14568 4mk1:A (1.85) BS03 27Y 3.1.-.- GO:0003723 ... M9V5A4 23978130 MOAD: ic50=16uM
    PDBbind: -logKd/Ki=4.80, IC50=16uM
    14569 4mk1:A (1.85) BS04 27Y 3.1.-.- GO:0003723 ... M9V5A4 23978130 MOAD: ic50=16uM
    PDBbind: -logKd/Ki=4.80, IC50=16uM
    14570 4mk1:A (1.85) BS05 27Y 3.1.-.- GO:0003723 ... M9V5A4 23978130 MOAD: ic50=16uM
    PDBbind: -logKd/Ki=4.80, IC50=16uM
    14571 4mk2:A (1.85) BS04 28B 3.1.-.- GO:0003723 ... M9V5A4 23978130 MOAD: ic50=0.73uM
    PDBbind: -logKd/Ki=6.14, IC50=0.73uM
    14572 4mk5:A (1.9) BS03 28A 3.1.-.- GO:0003723 ... M9V5A4 23978130 MOAD: ic50=0.45uM
    PDBbind: -logKd/Ki=6.35, IC50=0.45uM
    14573 4mk7:A (2.8) BS02 28O 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 24069953 PDBbind: -logKd/Ki=6.36, IC50=435nM
    14574 4mk8:A (2.09) BS01 28Q 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 24069953 MOAD: ic50=1nM
    PDBbind: -logKd/Ki=9.00, IC50=1nM
    14575 4mk9:A (2.05) BS01 28R 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 24069953 MOAD: ic50=9nM
    PDBbind: -logKd/Ki=8.05, IC50=9nM
    14576 4mka:A (2.05) BS01 2AY 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 24069953 MOAD: ic50=1nM
    PDBbind: -logKd/Ki=9.00, IC50=1nM
    14577 4mlt:A (2.0) BS02 TM4 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 24635441 MOAD: Ki=1.4mM
    PDBbind: -logKd/Ki=2.85, Ki=1.4mM
    14578 4mlx:A (1.65) BS02 TM7 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 24635441 MOAD: Ki=0.65mM
    PDBbind: -logKd/Ki=3.19, Ki=0.65mM
    14579 4mm4:A (2.886) BS03 8PR ? GO:0005886 ... O67854 24121440 PDBbind: -logKd/Ki=6.37, Kd=431nM
    14580 4mm5:A (3.2) BS03 SRE ? GO:0005886 ... O67854 24121440 PDBbind: -logKd/Ki=7.74, Kd=18nM
    14581 4mm6:A (3.1) BS03 29E ? GO:0005886 ... O67854 24121440 PDBbind: -logKd/Ki=6.69, Ki=205nM
    14582 4mm7:A (2.85) BS03 29J ? GO:0005886 ... O67854 24121440 PDBbind: -logKd/Ki=3.63, Ki=235.5uM
    14583 4mm8:A (3.31) BS03 RFX ? GO:0005886 ... O67854 24121440 PDBbind: -logKd/Ki=6.11, Ki=778nM
    14584 4mm9:A (2.9) BS03 FVX ? GO:0005886 ... O67854 24121440 PDBbind: -logKd/Ki=5.68, Ki=2070nM
    14585 4mma:A (3.3) BS03 CXX ? GO:0005886 ... O67854 24121440 PDBbind: -logKd/Ki=6.04, Ki=920nM
    14586 4mme:A (2.5) BS03 29Q ? GO:0005886 ... O67854 24121440 MOAD: Kd=318nM
    PDBbind: -logKd/Ki=6.50, Kd=318nM
    14587 4mmf:A (2.7) BS03 29Q ? GO:0005886 ... O67854 24121440 PDBbind: -logKd/Ki=6.53, Kd=295nM
    14588 4mmm:A (1.47) BS01 BP7 1.11.1.24 GO:0008379 ... P30044 25025339 MOAD: Kd=150uM
    PDBbind: -logKd/Ki=3.82, Kd=150uM
    14589 4mmp:A (1.57) BS01 SLB N/A GO:0030288 ... N/A 25004958 MOAD: Kd=19.7nM
    PDBbind: -logKd/Ki=7.71, Kd=19.7nM
    14590 4mnp:A (2.5) BS01 SLB ? GO:0030288 ... Q8RDN9 25004958 MOAD: Kd=45.5nM
    PDBbind: -logKd/Ki=7.34, Kd=45.5nM
    14591 4mo4:A (1.67) BS01 ACP 2.7.1.170 GO:0005524 ... Q9I5Q5 24362022 MOAD: Kd=0.06mM
    PDBbind: -logKd/Ki=4.22, Kd=0.06mM
    14592 4mo8:A (1.85) BS02 2VQ 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 24128000 MOAD: Ki=10.1nM
    PDBbind: -logKd/Ki=8.00, Ki=10.1nM
    BindingDB: Ki=10nM
    14593 4mot:A (1.75) BS01 2B7 5.6.2.2 GO:0003677 ... Q8DQB5 24405701 PDBbind: -logKd/Ki=7.30, IC50=50nM
    14594 4mp2:A (1.751) BS01 PV1 2.7.11.2 GO:0004672 ... Q15119 24356970 MOAD: Kd=3570nM
    PDBbind: -logKd/Ki=5.45, Kd=3570nM
    BindingDB: IC50=6.78e+3nM, Kd=3570nM
    14595 4mp7:A (1.8) BS01 PFT 2.7.11.2 GO:0004672 ... Q15119 24356970 MOAD: Kd=1827nM
    PDBbind: -logKd/Ki=5.74, Kd=1827nM
    BindingDB: IC50=5.68e+3nM, Kd=1827nM
    14596 4mpc:A (1.699) BS01 PV2 2.7.11.2 GO:0004672 ... Q15119 24356970 MOAD: Kd=711nM
    PDBbind: -logKd/Ki=6.15, Kd=711nM
    BindingDB: IC50=2.11e+3nM, Kd=711nM
    14597 4mpe:A (1.953) BS01 PV8 2.7.11.2 GO:0004672 ... Q15119 24356970 MOAD: Kd=426nM
    PDBbind: -logKd/Ki=6.37, Kd=426nM
    BindingDB: Kd=426nM, IC50=570nM
    14598 4mpn:A (1.752) BS01 PV0 2.7.11.2 GO:0004672 ... Q15119 24356970 MOAD: Kd=239nM
    PDBbind: -logKd/Ki=6.62, Kd=239nM
    BindingDB: EC50=456nM, Kd=156nM, IC50=456nM
    14599 4mq1:A (2.35) BS01 2C3 2.7.11.23
    2.7.12.1    		 GO:0004672 ... Q13627 24239188 PDBbind: -logKd/Ki=7.92, IC50=0.012uM
    BindingDB: IC50=12nM
    14600 4mq2:A (2.8) BS01 2C4 2.7.11.23
    2.7.12.1    		 GO:0004672 ... Q13627 24239188 PDBbind: -logKd/Ki=7.01, IC50=0.097uM
    BindingDB: IC50=97nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

    • yangzhanglabumich.edu | (734) 647-1549 | 100 Washtenaw Avenue, Ann Arbor, MI 48109-2218