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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    1201 1je8:A (2.12) BS02 dna ? GO:0003677 ... P0AF28 12352954 PDBbind: Kd=0.15nM
    1202 1je8:B (2.12) BS01 dna ? GO:0003677 ... P0AF28 12352954 PDBbind: Kd=0.15nM
    1203 1je8:B (2.12) BS02 dna ? GO:0003677 ... P0AF28 12352954 PDBbind: Kd=0.15nM
    1204 1je8:E (2.12) BS01 dna ? GO:0003677 ... P0AF28 12352954 PDBbind: Kd=0.15nM
    1205 1je8:E (2.12) BS02 dna ? GO:0003677 ... P0AF28 12352954 PDBbind: Kd=0.15nM
    1206 1je8:F (2.12) BS01 dna ? GO:0003677 ... P0AF28 12352954 PDBbind: Kd=0.15nM
    1207 1je8:F (2.12) BS02 dna ? GO:0003677 ... P0AF28 12352954 PDBbind: Kd=0.15nM
    1208 1jey:A (2.5) BS01 dna 3.6.4.-
    4.2.99.-    		 GO:0000723 ... P12956 11493912 PDBbind: Kd=0.15nM
    1209 1jey:A (2.5) BS02 dna 3.6.4.-
    4.2.99.-    		 GO:0000723 ... P12956 11493912 PDBbind: Kd=0.15nM
    1210 1jey:B (2.5) BS01 dna 3.6.4.- GO:0000723 ... P13010 11493912 PDBbind: Kd=0.15nM
    1211 1jey:B (2.5) BS02 dna 3.6.4.- GO:0000723 ... P13010 11493912 PDBbind: Kd=0.15nM
    1212 1jfh:A (2.03) BS01 MA3 3.2.1.1 GO:0003824 ... P00690 9385631 PDBbind: -logKd/Ki=2.05, Ki=9mM
    1213 1jfh:A (2.03) BS02 MA2 3.2.1.1 GO:0003824 ... P00690 9385631 PDBbind: -logKd/Ki=2.05, Ki=9mM
    1214 1jfs:A (2.9) BS01 dna ? GO:0000976 ... P0ACP7 11781089 PDBbind: Kd=2.2nM
    1215 1jft:A (2.5) BS01 dna ? GO:0000976 ... P0ACP7 11781089 PDBbind: Kd=0.7nM
    1216 1jg0:A (2.0) BS02 DDT 2.1.1.45 GO:0000287 ... P0A884 11590022 MOAD: ic50=5uM
    PDBbind: -logKd/Ki=5.30, IC50=5.0uM
    BindingDB: IC50=5.0e+3nM, Ki=1.8e+3nM
    1217 1jg0:B (2.0) BS02 DDT 2.1.1.45 GO:0000287 ... P0A884 11590022 MOAD: ic50=5uM
    PDBbind: -logKd/Ki=5.30, IC50=5.0uM
    BindingDB: IC50=5.0e+3nM, Ki=1.8e+3nM
    1218 1jgl:H (2.15) BS01 EST N/A N/A N/A 11451948 PDBbind: -logKd/Ki=8.70, Kd=2nM
    1219 1jgl:L (2.15) BS01 EST ? N/A Q7TS98 11451948 MOAD: Kd=2nM
    PDBbind: -logKd/Ki=8.70, Kd=2nM
    1220 1jh1:A (2.7) BS05 JST 3.4.24.34 GO:0004222 ... P22894 11563922 PDBbind: -logKd/Ki=4.39, Ki=41uM
    1221 1jh9:A (2.55) BS01 dna ? GO:0000976 ... P0ACP7 11781089 PDBbind: Kd=2nM
    1222 1jif:A (1.6) BS01 BLM ? GO:0046677 ... Q53793 11706014 PDBbind: -logKd/Ki=6.20, Kd=630nM
    1223 1jif:A (1.6) BS02 BLM ? GO:0046677 ... Q53793 11706014 PDBbind: -logKd/Ki=6.20, Kd=630nM
    1224 1jif:B (1.6) BS01 BLM ? GO:0046677 ... Q53793 11706014 PDBbind: -logKd/Ki=6.20, Kd=630nM
    1225 1jif:B (1.6) BS02 BLM ? GO:0046677 ... Q53793 11706014 PDBbind: -logKd/Ki=6.20, Kd=630nM
    1226 1jii:A (3.2) BS01 383 6.1.1.1 GO:0000166 ... A6QHR2 11567092 PDBbind: -logKd/Ki=9.00, IC50=1nM
    1227 1jij:A (3.2) BS01 629 6.1.1.1 GO:0000166 ... A6QHR2 11567092 PDBbind: -logKd/Ki=8.52, IC50=3nM
    1228 1jik:A (2.8) BS01 545 6.1.1.1 GO:0000166 ... A6QHR2 11567092 PDBbind: -logKd/Ki=9.70, IC50=0.2nM
    1229 1jil:A (2.2) BS01 485 6.1.1.1 GO:0000166 ... A6QHR2 11567092 MOAD: ic50=4nM
    PDBbind: -logKd/Ki=8.40, IC50=4nM
    1230 1jiz:A (2.6) BS06 CGS 3.4.24.65 GO:0004222 ... P39900 11575929 PDBbind: -logKd/Ki=8.70, IC50=2.0nM
    1231 1jj4:A (2.4) BS01 dna ? GO:0003677 ... P06790 10906136 PDBbind: Kd=1.6nM
    1232 1jj4:A (2.4) BS02 dna ? GO:0003677 ... P06790 10906136 PDBbind: Kd=1.6nM
    1233 1jj4:B (2.4) BS01 dna ? GO:0003677 ... P06790 10906136 PDBbind: Kd=1.6nM
    1234 1jj4:B (2.4) BS02 dna ? GO:0003677 ... P06790 10906136 PDBbind: Kd=1.6nM
    1235 1jj9:A (2.0) BS05 BBT 3.4.24.34 GO:0004222 ... P22894 11278347 MOAD: ic50=1700nM
    PDBbind: -logKd/Ki=5.77, IC50=1.7uM
    BindingDB: IC50=1700nM
    1236 1jje:A (1.8) BS04 BYS 3.5.2.6 GO:0008270 ... Q79MP6 11390410 MOAD: ic50=0.0037uM
    PDBbind: -logKd/Ki=8.43, IC50=3.7nM
    1237 1jjk:A (3.0) BS01 BMP 4.1.1.23 GO:0004590 ... P08244 11526316 PDBbind: -logKd/Ki=11.06, Ki=8.8pM
    1238 1jjk:A (3.0) BS02 BMP 4.1.1.23 GO:0004590 ... P08244 11526316 PDBbind: -logKd/Ki=11.06, Ki=8.8pM
    1239 1jjk:B (3.0) BS01 BMP 4.1.1.23 GO:0004590 ... P08244 11526316 PDBbind: -logKd/Ki=11.06, Ki=8.8pM
    1240 1jjk:B (3.0) BS02 BMP 4.1.1.23 GO:0004590 ... P08244 11526316 PDBbind: -logKd/Ki=11.06, Ki=8.8pM
    1241 1jjt:A (1.8) BS04 BDS 3.5.2.6 GO:0008270 ... Q79MP6 11390410 MOAD: ic50=0.009uM
    PDBbind: -logKd/Ki=8.05, IC50=9nM
    1242 1jk1:A (1.9) BS01 dna ? N/A P08046 11800559 PDBbind: Kd=26pM
    1243 1jk1:A (1.9) BS02 dna ? N/A P08046 11800559 PDBbind: Kd=26pM
    1244 1jk2:A (1.65) BS01 dna ? N/A P08046 11800559 PDBbind: Kd=43pM
    1245 1jk2:A (1.65) BS02 dna ? N/A P08046 11800559 PDBbind: Kd=43pM
    1246 1jk7:A (1.9) BS03 OKA 3.1.3.16 GO:0000070 ... P36873 11535607 PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=>5000nM
    1247 1jko:C (2.24) BS01 dna ? GO:0000150 ... P03013 11847127 PDBbind: Kd=7.6nM
    1248 1jko:C (2.24) BS02 dna ? GO:0000150 ... P03013 11847127 PDBbind: Kd=7.6nM
    1249 1jkp:C (2.8) BS01 dna ? GO:0000150 ... P03013 11847127 PDBbind: Kd=2.05nM
    1250 1jkp:C (2.8) BS02 dna ? GO:0000150 ... P03013 11847127 PDBbind: Kd=2.05nM
    1251 1jkq:C (2.86) BS01 dna ? GO:0000150 ... P03013 11847127 PDBbind: Kd=27.1nM
    1252 1jkq:C (2.86) BS02 dna ? GO:0000150 ... P03013 11847127 PDBbind: Kd=27.1nM
    1253 1jkr:C (2.28) BS01 dna ? GO:0000150 ... P03013 11847127 PDBbind: Kd=97.4nM
    1254 1jkr:C (2.28) BS02 dna ? GO:0000150 ... P03013 11847127 PDBbind: Kd=97.4nM
    1255 1jld:A (2.5) BS01 0PP 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.47    		 GO:0004190 ... P04584 9216835 MOAD: ic50=185nM
    PDBbind: -logKd/Ki=6.73, IC50=185nM
    1256 1jld:B (2.5) BS01 0PP 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.47    		 GO:0004190 ... P04584 9216835 PDBbind: -logKd/Ki=6.73, IC50=185nM
    1257 1jlq:A (3.0) BS01 SBN 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0003676 ... P04585 11384233 PDBbind: -logKd/Ki=8.15, IC50=0.007uM
    1258 1jlx:A (2.2) BS01 GAL ? N/A Q71QF2 9334739 PDBbind: -logKd/Ki=5.80, IC50=1.6uM
    1259 1jlx:B (2.2) BS01 GAL ? N/A Q71QF2 9334739 PDBbind: -logKd/Ki=5.80, IC50=1.6uM
    1260 1jmf:A (2.5) BS01 UMP 2.1.1.45 GO:0004799 ... P00469 9514716 MOAD: Kd=1.7uM
    PDBbind: -logKd/Ki=5.77, Kd=1.7uM
    1261 1jmg:A (2.2) BS01 UMP 2.1.1.45 GO:0004799 ... P00469 9514716 MOAD: Kd=0.85uM
    PDBbind: -logKd/Ki=6.07, Kd=0.85uM
    1262 1jmi:A (2.5) BS01 UMP 2.1.1.45 GO:0004799 ... P00469 9514716 MOAD: Kd=0.87uM
    PDBbind: -logKd/Ki=6.06, Kd=0.87uM
    1263 1jn2:P (1.9) BS03 SFP ? GO:0030246 ... P02866 11504727 MOAD: Ka=12200M^-1
    PDBbind: -logKd/Ki=4.09, Kd=82uM
    1264 1jn4:A (1.8) BS01 139 4.6.1.18 GO:0003676 ... P61823 11513604 MOAD: Ki=11.3uM
    PDBbind: -logKd/Ki=4.95, Ki=11.3uM
    1265 1joc:A (2.2) BS03 ITP ? GO:0046872 ... Q15075 11741531 MOAD: Kd=24uM
    PDBbind: -logKd/Ki=4.62, Kd=24uM
    1266 1joc:B (2.2) BS03 ITP ? GO:0046872 ... Q15075 11741531 MOAD: Kd=24uM
    PDBbind: -logKd/Ki=4.62, Kd=24uM
    1267 1jq3:A (1.8) BS01 AAT 2.5.1.16 GO:0003824 ... Q9WZC2 11731804 MOAD: ic50=0.2uM
    PDBbind: -logKd/Ki=6.70, IC50=0.2uM
    1268 1jqd:A (2.28) BS01 SAH 2.1.1.8 GO:0001692 ... P50135 11566133 MOAD: Ki=6.9uM
    PDBbind: -logKd/Ki=5.16, Ki=6.9uM
    BindingDB: Ki=18100nM
    1269 1jqe:A (1.91) BS02 QUN 2.1.1.8 GO:0001692 ... P50135 11566133 PDBbind: -logKd/Ki=6.44, Ki=0.36uM
    1270 1jqy:D (2.14) BS01 A32 ? GO:0005576 ... P32890 11880036 MOAD: Ki=12uM
    PDBbind: -logKd/Ki=4.92, Ki=12uM
    1271 1jqy:D (2.14) BS02 A32 ? GO:0005576 ... P32890 11880036 MOAD: Ki=12uM
    PDBbind: -logKd/Ki=4.92, Ki=12uM
    1272 1jqy:E (2.14) BS01 A32 ? GO:0005576 ... P32890 11880036 MOAD: Ki=12uM
    PDBbind: -logKd/Ki=4.92, Ki=12uM
    1273 1jqy:E (2.14) BS02 A32 ? GO:0005576 ... P32890 11880036 MOAD: Ki=12uM
    PDBbind: -logKd/Ki=4.92, Ki=12uM
    1274 1jr1:A (2.6) BS02 MOA 1.1.1.205 GO:0000166 ... P12269 8681386 PDBbind: -logKd/Ki=8.22, Ki=6nM
    1275 1jsv:A (1.96) BS01 U55 2.7.11.22 GO:0000082 ... P24941 11604388 PDBbind: -logKd/Ki=5.70, Ki=2uM
    BindingDB: IC50=1900nM
    1276 1jt0:A (2.9) BS01 dna ? GO:0003677 ... P0A0N4 11867549 PDBbind: Kd=49nM
    1277 1jt0:A (2.9) BS02 dna ? GO:0003677 ... P0A0N4 11867549 PDBbind: Kd=49nM
    1278 1jt0:B (2.9) BS01 dna ? GO:0003677 ... P0A0N4 11867549 PDBbind: Kd=49nM
    1279 1jt0:B (2.9) BS02 dna ? GO:0003677 ... P0A0N4 11867549 PDBbind: Kd=49nM
    1280 1jt0:C (2.9) BS01 dna ? GO:0003677 ... P0A0N4 11867549 PDBbind: Kd=49nM
    1281 1jt0:C (2.9) BS02 dna ? GO:0003677 ... P0A0N4 11867549 PDBbind: Kd=49nM
    1282 1jt0:D (2.9) BS01 dna ? GO:0003677 ... P0A0N4 11867549 PDBbind: Kd=49nM
    1283 1jt0:D (2.9) BS02 dna ? GO:0003677 ... P0A0N4 11867549 PDBbind: Kd=49nM
    1284 1jt1:A (1.78) BS03 MCO 3.5.2.6 N/A Q9K578 12507470 MOAD: Ki=400uM
    PDBbind: -logKd/Ki=3.40, Ki=400uM
    1285 1jtq:A (2.5) BS02 LY3 2.1.1.45 GO:0000287 ... P0A884 11697906 PDBbind: -logKd/Ki=8.07, Ki=8.5nM
    1286 1jtq:B (2.5) BS03 LY3 2.1.1.45 GO:0000287 ... P0A884 11697906 PDBbind: -logKd/Ki=8.07, Ki=8.5nM
    1287 1juj:A (3.0) BS02 LYA 2.1.1.45 GO:0000900 ... P04818 11697906 PDBbind: -logKd/Ki=6.96, Ki=109nM
    BindingDB: IC50=9500nM, Ki=1.3nM
    1288 1juj:B (3.0) BS03 LYA 2.1.1.45 GO:0000900 ... P04818 11697906 PDBbind: -logKd/Ki=6.96, Ki=109nM
    BindingDB: IC50=9500nM, Ki=1.3nM
    1289 1jut:A (2.7) BS02 LYD 2.1.1.45 GO:0000287 ... P0A884 11697906 PDBbind: -logKd/Ki=7.32, Ki=47.7nM
    1290 1jut:B (2.7) BS03 LYD 2.1.1.45 GO:0000287 ... P0A884 11697906 PDBbind: -logKd/Ki=7.32, Ki=47.7nM
    1291 1juy:A (2.5) BS03 H5P 6.3.4.4 GO:0000166 ... P0A7D4 8961938 PDBbind: -logKd/Ki=7.66, Ki=22nM
    1292 1jvu:A (1.78) BS01 C2P 4.6.1.18 GO:0003676 ... P61823 11746706 PDBbind: -logKd/Ki=5.15, Ki=7uM
    BindingDB: Ki=7000nM
    1293 1jwt:A (2.5) BS01 BLI 3.4.21.5 GO:0004252 ... P00734 11720865 MOAD: Ki=14nM
    PDBbind: -logKd/Ki=7.85, Ki=14nM
    1294 1jys:A (1.9) BS01 ADE 3.2.2.9 GO:0003824 ... P0AF12 11591349 MOAD: Ki=300uM
    PDBbind: -logKd/Ki=3.52, Ki=300uM
    1295 1jys:B (1.9) BS01 ADE 3.2.2.9 GO:0003824 ... P0AF12 11591349 MOAD: Ki=300uM
    PDBbind: -logKd/Ki=3.52, Ki=300uM
    1296 1jzs:A (2.5) BS03 MRC 6.1.1.5 GO:0000049 ... P56690 11584022 MOAD: Ki=0.25uM
    PDBbind: -logKd/Ki=6.60, Ki=0.25uM
    1297 1k03:A (2.7) BS02 HBA 1.6.99.1 GO:0003959 ... Q02899 11668181 PDBbind: -logKd/Ki=6.00, Kd=1uM
    1298 1k06:A (1.8) BS01 BZD 2.4.1.1 GO:0000166 ... P00489 11895439 MOAD: Ki=4.6uM
    PDBbind: -logKd/Ki=5.34, Ki=4.6uM
    BindingDB: Ki=4600nM
    1299 1k06:A (1.8) BS02 BZD 2.4.1.1 GO:0000166 ... P00489 11895439 MOAD: Ki=4.6uM
    PDBbind: -logKd/Ki=5.34, Ki=4.6uM
    BindingDB: Ki=4600nM
    1300 1k08:A (2.26) BS01 BZD 2.4.1.1 GO:0000166 ... P00489 11895439 MOAD: Ki=4.6uM
    PDBbind: -logKd/Ki=5.34, Ki=4.6uM
    BindingDB: Ki=4600nM
    1301 1k08:A (2.26) BS02 BZD 2.4.1.1 GO:0000166 ... P00489 11895439 MOAD: Ki=4.6uM
    PDBbind: -logKd/Ki=5.34, Ki=4.6uM
    BindingDB: Ki=4600nM
    1302 1k1g:A (-1.00) BS01 rna ? GO:0003676 ... Q15637 11691992 PDBbind: Kd=1uM
    1303 1k1i:A (2.2) BS02 FD1 3.4.21.4 GO:0004175 ... P00760 11676542 MOAD: Kd=264nM
    PDBbind: -logKd/Ki=6.58, Kd=264nM
    BindingDB: Ki=99999999999999nM
    1304 1k1j:A (2.2) BS02 FD2 3.4.21.4 GO:0004175 ... P00760 11676542 MOAD: Kd=28nM
    PDBbind: -logKd/Ki=7.55, Kd=28nM
    BindingDB: Ki=36nM
    1305 1k1l:A (2.5) BS02 FD3 3.4.21.4 GO:0004175 ... P00760 11676542 MOAD: Kd=125nM
    PDBbind: -logKd/Ki=6.90, Kd=125nM
    BindingDB: Ki=220nM
    1306 1k1m:A (2.2) BS02 FD4 3.4.21.4 GO:0004175 ... P00760 11676542 MOAD: Kd=40nM
    PDBbind: -logKd/Ki=7.40, Kd=40nM
    BindingDB: Ki=99999999999999nM
    1307 1k1n:A (2.0) BS02 CCR 3.4.21.4 GO:0004175 ... P00760 11676542 MOAD: Kd=153nM
    PDBbind: -logKd/Ki=6.82, Kd=153nM
    1308 1k1o:A (2.0) BS02 IGN 3.4.21.4 GO:0004175 ... P00760 11676542 PDBbind: -logKd/Ki=6.17, Ki=675nM
    BindingDB: Ki=675nM
    1309 1k1p:A (1.9) BS02 MEL 3.4.21.4 GO:0004175 ... P00760 11676542 PDBbind: -logKd/Ki=7.92, IC50=11.9nM
    BindingDB: IC50=11nM
    1310 1k21:H (1.86) BS05 IGN 3.4.21.5 GO:0004252 ... P00734 11676542 MOAD: Ki=4.2nM
    PDBbind: -logKd/Ki=8.38, Ki=4.2nM
    BindingDB: Ki=15nM, IC50=1300nM
    1311 1k22:H (1.93) BS05 MEL 3.4.21.5 GO:0004252 ... P00734 11676542 MOAD: Ki=4nM
    PDBbind: -logKd/Ki=8.40, Ki=4nM
    BindingDB: IC50=69nM, Ki=1.2nM
    1312 1k27:A (1.95) BS02 MTM 2.4.2.28 GO:0003824 ... Q13126 14705926 MOAD: Ki=1nM
    PDBbind: -logKd/Ki=9.00, Ki=1.0nM
    1313 1k2i:1 (1.8) BS01 SN1 3.4.21.1 GO:0004252 ... P00766 11846564 PDBbind: -logKd/Ki=3.11, IC50=0.78mM
    1314 1k2v:N (1.97) BS01 DEF ? GO:0005515 ... P07822 11805094 MOAD: Kd=36uM
    PDBbind: -logKd/Ki=4.44, Kd=36uM
    1315 1k3t:C (1.95) BS01 BRZ 1.2.1.12 GO:0004365 ... P22513 12044862 MOAD: ic50=64uM
    PDBbind: -logKd/Ki=4.19, IC50=64uM
    1316 1k4g:A (1.7) BS02 AIQ 2.4.2.29 GO:0002099 ... P28720 11921407 MOAD: Ki=1.4uM
    PDBbind: -logKd/Ki=5.85, Ki=1.4uM
    1317 1k4h:A (1.8) BS02 APQ 2.4.2.29 GO:0002099 ... P28720 11921407 MOAD: Ki=7.7uM
    PDBbind: -logKd/Ki=5.11, Ki=7.7uM
    1318 1k6c:A (2.2) BS01 MK1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P35963 11790852 PDBbind: -logKd/Ki=7.48, Kd=33nM
    1319 1k6c:B (2.2) BS01 MK1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P35963 11790852 MOAD: Kd=33nM
    PDBbind: -logKd/Ki=7.48, Kd=33nM
    1320 1k6p:A (2.2) BS01 XN3 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P35963 11790852 PDBbind: -logKd/Ki=7.36, Kd=44nM
    1321 1k6p:B (2.2) BS01 XN3 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P35963 11790852 MOAD: Kd=44nM
    PDBbind: -logKd/Ki=7.36, Kd=44nM
    1322 1k6t:A (2.25) BS01 XN1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P35963 11790852 PDBbind: -logKd/Ki=7.62, Kd=24nM
    1323 1k6t:B (2.25) BS01 XN1 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P35963 11790852 MOAD: Kd=24nM
    PDBbind: -logKd/Ki=7.62, Kd=24nM
    1324 1k6v:A (2.0) BS01 XN2 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P35963 11790852 PDBbind: -logKd/Ki=6.92, Kd=120nM
    1325 1k6v:B (2.0) BS01 XN2 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P35963 11790852 MOAD: Kd=120nM
    PDBbind: -logKd/Ki=6.92, Kd=120nM
    1326 1k9s:A (2.0) BS02 FM2 2.4.2.1 GO:0003824 ... P0ABP8 11786017 PDBbind: -logKd/Ki=6.52, Ki=0.30uM
    1327 1k9s:D (2.0) BS01 FM2 2.4.2.1 GO:0003824 ... P0ABP8 11786017 PDBbind: -logKd/Ki=6.52, Ki=0.30uM
    1328 1kak:A (2.5) BS01 FNP 3.1.3.48 GO:0004725 ... P18031 11741477 MOAD: ic50=26uM
    PDBbind: -logKd/Ki=4.59, IC50=26uM
    1329 1kav:A (2.35) BS01 FEP 3.1.3.48 GO:0004725 ... P18031 11741477 MOAD: Ki=1.5uM
    PDBbind: -logKd/Ki=5.82, Ki=1.5uM
    1330 1kc7:A (2.2) BS02 PPR 2.7.9.1 GO:0003824 ... P22983 11790099 MOAD: Ki=3uM
    PDBbind: -logKd/Ki=5.52, Ki=3uM
    1331 1kdk:A (1.7) BS01 DHT ? N/A P04278 12054810 MOAD: Kd=0.9nM
    PDBbind: -logKd/Ki=9.05, Kd=0.9nM
    BindingDB: IC50=3.8nM, Kd=0.182000nM
    1332 1kds:A (2.15) BS01 NPB 3.5.2.6 GO:0008800 ... P00811 12109906 PDBbind: -logKd/Ki=5.77, Ki=1.7uM
    BindingDB: Ki=1700nM, IC50=5000nM
    1333 1kdw:A (2.28) BS01 4CB 3.5.2.6 GO:0008800 ... P00811 12109906 PDBbind: -logKd/Ki=5.54, Ki=2.9uM
    BindingDB: Ki=2900nM
    1334 1ke0:A (2.3) BS01 CVB 3.5.2.6 GO:0008800 ... P00811 12109906 PDBbind: -logKd/Ki=5.38, Ki=4.2uM
    BindingDB: Ki=4200nM
    1335 1ke3:A (2.15) BS01 BDB 3.5.2.6 GO:0008800 ... P00811 12109906 PDBbind: -logKd/Ki=6.70, Ki=0.20uM
    BindingDB: Ki=200nM
    1336 1ke5:A (2.2) BS01 LS1 2.7.11.22 GO:0000082 ... P24941 11728181 MOAD: ic50=560nM
    PDBbind: -logKd/Ki=6.25, IC50=560nM
    BindingDB: IC50=560nM
    1337 1ke6:A (2.0) BS01 LS2 2.7.11.22 GO:0000082 ... P24941 11728181 MOAD: ic50=5.7nM
    PDBbind: -logKd/Ki=8.24, IC50=5.7nM
    BindingDB: IC50=5.7nM
    1338 1ke7:A (2.0) BS01 LS3 2.7.11.22 GO:0000082 ... P24941 11728181 MOAD: ic50=8.9nM
    PDBbind: -logKd/Ki=8.05, IC50=8.9nM
    BindingDB: IC50=8.9nM
    1339 1ke8:A (2.0) BS01 LS4 2.7.11.22 GO:0000082 ... P24941 11728181 MOAD: ic50=1000nM
    PDBbind: -logKd/Ki=6.00, IC50=1uM
    BindingDB: IC50=1000nM
    1340 1ke9:A (2.0) BS01 LS5 2.7.11.22 GO:0000082 ... P24941 11728181 MOAD: ic50=660nM
    PDBbind: -logKd/Ki=6.18, IC50=660nM
    BindingDB: Kd=210nM, koff=4.97E-02s-1, kon=175033.3M-1-s-1, IC50=660nM
    1341 1kel:H (1.9) BS01 AAH ? N/A P01868 8643580 MOAD: Kd=52nM
    PDBbind: -logKd/Ki=7.28, Kd=52nM
    1342 1kel:L (1.9) BS01 AAH N/A N/A N/A 8643580 PDBbind: -logKd/Ki=7.28, Kd=52nM
    1343 1kf0:A (2.5) BS01 ACP 2.7.2.3 GO:0004618 ... Q7SIB7 12102622 MOAD: Kd=2.8mM
    PDBbind: -logKd/Ki=2.55, Kd=2.80mM
    1344 1kf6:B (2.7) BS04 HQO 1.3.5.1 GO:0005515 ... P0AC47 11850430 PDBbind: -logKd/Ki=6.70, Ki=0.2uM
    1345 1kf6:C (2.7) BS01 HQO ? GO:0000104 ... P0A8Q0 11850430 PDBbind: -logKd/Ki=6.70, Ki=0.2uM
    1346 1kf6:D (2.7) BS01 HQO ? GO:0000104 ... P0A8Q3 11850430 PDBbind: -logKd/Ki=6.70, Ki=0.2uM
    1347 1kfv:A (2.55) BS01 dna 3.2.2.23
    4.2.99.18    		 GO:0003676 ... P42371 12065399 PDBbind: Kd=6nM
    1348 1kfv:A (2.55) BS02 dna 3.2.2.23
    4.2.99.18    		 GO:0003676 ... P42371 12065399 PDBbind: Kd=6nM
    1349 1kfv:B (2.55) BS01 dna 3.2.2.23
    4.2.99.18    		 GO:0003676 ... P42371 12065399 PDBbind: Kd=6nM
    1350 1kfv:B (2.55) BS02 dna 3.2.2.23
    4.2.99.18    		 GO:0003676 ... P42371 12065399 PDBbind: Kd=6nM
    1351 1kfy:B (3.6) BS04 BRS 1.3.5.1 GO:0005515 ... P0AC47 11850430 PDBbind: -logKd/Ki=5.28, Ki=5.2uM
    1352 1kfy:C (3.6) BS01 BRS ? GO:0000104 ... P0A8Q0 11850430 PDBbind: -logKd/Ki=5.28, Ki=5.2uM
    1353 1kfy:D (3.6) BS01 BRS ? GO:0000104 ... P0A8Q3 11850430 PDBbind: -logKd/Ki=5.28, Ki=5.2uM
    1354 1kjr:A (1.55) BS01 GAL ? GO:0030246 ... P17931 15701008 PDBbind: -logKd/Ki=6.06, Kd=0.88uM
    1355 1kjr:A (1.55) BS02 BEK ? GO:0030246 ... P17931 15701008 PDBbind: -logKd/Ki=6.06, Kd=0.88uM
    1356 1kkq:A (3.0) BS02 471 ? GO:0003677 ... Q07869 11845213 PDBbind: -logKd/Ki=6.62, IC50=0.24uM
    1357 1kll:A (1.5) BS01 MC ? N/A O05205 12121648 PDBbind: -logKd/Ki=5.20, Kd=6.3uM
    1358 1km3:A (1.5) BS01 UP6 4.1.1.23 GO:0004590 ... O26232 11900543 PDBbind: -logKd/Ki=4.91, Ki=12.4uM
    BindingDB: Ki=12400nM
    1359 1kmv:A (1.05) BS01 LII 1.5.1.3 GO:0000900 ... P00374 12096917 PDBbind: -logKd/Ki=6.95, IC50=112nM
    1360 1kmy:A (2.0) BS02 BPY 1.13.11.39 GO:0003824 ... P47228 9857017 MOAD: Kd=8uM
    PDBbind: -logKd/Ki=5.10, Kd=8uM
    1361 1knz:A (2.45) BS01 rna ? GO:0003723 ... P03536 11792322 PDBbind: Kd=79nM
    1362 1knz:B (2.45) BS01 rna ? GO:0003723 ... P03536 11792322 PDBbind: Kd=79nM
    1363 1knz:C (2.45) BS01 rna ? GO:0003723 ... P03536 11792322 PDBbind: Kd=79nM
    1364 1knz:D (2.45) BS01 rna ? GO:0003723 ... P03536 11792322 PDBbind: Kd=79nM
    1365 1knz:I (2.45) BS01 rna ? GO:0003723 ... P03536 11792322 PDBbind: Kd=79nM
    1366 1knz:J (2.45) BS01 rna ? GO:0003723 ... P03536 11792322 PDBbind: Kd=79nM
    1367 1knz:M (2.45) BS01 rna ? GO:0003723 ... P03536 11792322 PDBbind: Kd=79nM
    1368 1knz:N (2.45) BS01 rna ? GO:0003723 ... P03536 11792322 PDBbind: Kd=79nM
    1369 1kog:A (3.5) BS01 rna 6.1.1.3 GO:0000166 ... P0A8M3 11953757 PDBbind: Kd=0.01uM
    1370 1kog:A (3.5) BS02 rna 6.1.1.3 GO:0000166 ... P0A8M3 11953757 PDBbind: Kd=0.01uM
    1371 1kog:B (3.5) BS01 rna 6.1.1.3 GO:0000166 ... P0A8M3 11953757 PDBbind: Kd=0.01uM
    1372 1kog:B (3.5) BS02 rna 6.1.1.3 GO:0000166 ... P0A8M3 11953757 PDBbind: Kd=0.01uM
    1373 1kog:C (3.5) BS01 rna 6.1.1.3 GO:0000166 ... P0A8M3 11953757 PDBbind: Kd=0.01uM
    1374 1kog:C (3.5) BS02 rna 6.1.1.3 GO:0000166 ... P0A8M3 11953757 PDBbind: Kd=0.01uM
    1375 1kog:D (3.5) BS01 rna 6.1.1.3 GO:0000166 ... P0A8M3 11953757 PDBbind: Kd=0.01uM
    1376 1kog:D (3.5) BS02 rna 6.1.1.3 GO:0000166 ... P0A8M3 11953757 PDBbind: Kd=0.01uM
    1377 1kog:E (3.5) BS01 rna 6.1.1.3 GO:0000166 ... P0A8M3 11953757 PDBbind: Kd=0.01uM
    1378 1kog:E (3.5) BS02 rna 6.1.1.3 GO:0000166 ... P0A8M3 11953757 PDBbind: Kd=0.01uM
    1379 1kog:F (3.5) BS01 rna 6.1.1.3 GO:0000166 ... P0A8M3 11953757 PDBbind: Kd=0.01uM
    1380 1kog:F (3.5) BS02 rna 6.1.1.3 GO:0000166 ... P0A8M3 11953757 PDBbind: Kd=0.01uM
    1381 1kog:G (3.5) BS01 rna 6.1.1.3 GO:0000166 ... P0A8M3 11953757 PDBbind: Kd=0.01uM
    1382 1kog:H (3.5) BS01 rna 6.1.1.3 GO:0000166 ... P0A8M3 11953757 PDBbind: Kd=0.01uM
    1383 1kpm:A (1.8) BS01 VIT 3.1.1.4 GO:0004623 ... P59071 12079380 MOAD: Ki=1.59uM
    PDBbind: -logKd/Ki=5.80, Ki=1.59uM
    1384 1kq2:A (2.71) BS01 rna ? GO:0003723 ... A0A0H3JV59 12093755 PDBbind: Kd=30.5nM
    1385 1kq2:B (2.71) BS01 rna ? GO:0003723 ... A0A0H3JV59 12093755 PDBbind: Kd=30.5nM
    1386 1kq2:H (2.71) BS01 rna ? GO:0003723 ... A0A0H3JV59 12093755 PDBbind: Kd=30.5nM
    1387 1kq2:I (2.71) BS01 rna ? GO:0003723 ... A0A0H3JV59 12093755 PDBbind: Kd=30.5nM
    1388 1kq2:K (2.71) BS01 rna ? GO:0003723 ... A0A0H3JV59 12093755 PDBbind: Kd=30.5nM
    1389 1kq2:M (2.71) BS01 rna ? GO:0003723 ... A0A0H3JV59 12093755 PDBbind: Kd=30.5nM
    1390 1kqq:A (-1.00) BS01 dna ? GO:0003677 ... Q24573 11867548 PDBbind: Kd=28nM
    1391 1kqq:A (-1.00) BS02 dna ? GO:0003677 ... Q24573 11867548 PDBbind: Kd=28nM
    1392 1ksn:A (2.1) BS02 FXV 3.4.21.6 GO:0004252 ... P00742 12039587 MOAD: Ki=0.4nM
    PDBbind: -logKd/Ki=9.40, Ki=0.4nM
    1393 1kti:A (1.97) BS01 AZC 2.4.1.1 GO:0000166 ... P00489 11895439 MOAD: Ki=370uM
    PDBbind: -logKd/Ki=3.43, Ki=370uM
    BindingDB: Ki=305000nM
    1394 1ktt:B (2.1) BS03 C02 3.4.21.5 GO:0004252 ... P00734 11960487 MOAD: ic50=1.5uM
    PDBbind: -logKd/Ki=5.82, IC50=1.5uM
    BindingDB: IC50=1500nM
    1395 1kv1:A (2.5) BS01 BMU 2.7.11.24 GO:0000077 ... Q16539 11896401 MOAD: Kd=1.16uM
    PDBbind: -logKd/Ki=5.94, Kd=1.16uM
    BindingDB: Kd=1160nM, kon=118000M-1-s-1, koff=0.140000s-1, IC50=21000nM
    1396 1kv2:A (2.8) BS01 B96 2.7.11.24 GO:0000077 ... Q16539 11896401 PDBbind: -logKd/Ki=10.00, Kd=0.1nM
    BindingDB: Kd=0.1nM, IC50=12nM, Ki=22nM, koff=0.000008s-1, kon=84900M-1-s-1
    1397 1kv5:A (1.65) BS01 PGA 5.3.1.1 GO:0004807 ... P04789 11997014 MOAD: Ki=60uM
    PDBbind: -logKd/Ki=4.22, Ki=60uM
    1398 1kv5:B (1.65) BS01 PGA 5.3.1.1 GO:0004807 ... P04789 11997014 MOAD: Ki=60uM
    PDBbind: -logKd/Ki=4.22, Ki=60uM
    1399 1kvo:A (2.0) BS03 OAP 3.1.1.4 GO:0004623 ... P14555 8831753 MOAD: ic50=0.013uM
    PDBbind: -logKd/Ki=7.89, IC50=0.013uM
    BindingDB: IC50=21nM
    1400 1kwq:A (2.6) BS02 SG1 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 12166932 PDBbind: -logKd/Ki=9.21, IC50=0.62nM
    BindingDB: IC50=0.62nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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