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●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●DMFold ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    13601 4iaw:A (2.4) BS01 LIZ ? GO:0005506 ... P80188 23542582 MOAD: Kd=0.234nM
    PDBbind: -logKd/Ki=9.63, Kd=0.234nM
    13602 4iax:A (1.9) BS01 LIZ ? GO:0005506 ... P80188 23542582 MOAD: Kd=0.273nM
    PDBbind: -logKd/Ki=9.56, Kd=0.273nM
    13603 4ibb:A (1.752) BS01 1DK ? N/A Q05127 24495995 MOAD: Kd=270.7uM
    PDBbind: -logKd/Ki=3.57, Kd=270.7uM
    13604 4ibc:A (1.745) BS01 12G ? N/A Q05127 24495995 MOAD: Kd=1049uM
    PDBbind: -logKd/Ki=2.98, Kd=1049uM
    13605 4ibd:A (1.84) BS01 1DL ? N/A Q05127 24495995 MOAD: Kd=214.6uM
    PDBbind: -logKd/Ki=3.67, Kd=214.6uM
    13606 4ibe:A (1.95) BS01 11Y ? N/A Q05127 24495995 MOAD: Kd=70.6uM
    PDBbind: -logKd/Ki=4.15, Kd=70.6uM
    13607 4ibf:A (2.291) BS01 1D5 ? N/A Q05127 24495995 MOAD: Kd=36.8uM
    PDBbind: -logKd/Ki=4.43, Kd=36.8uM
    13608 4ibg:A (1.413) BS01 1D6 ? N/A Q05127 24495995 MOAD: Kd=108uM
    PDBbind: -logKd/Ki=3.97, Kd=108.0uM
    13609 4ibg:B (1.413) BS01 1D6 ? N/A Q05127 24495995 MOAD: Kd=108uM
    PDBbind: -logKd/Ki=3.97, Kd=108.0uM
    13610 4ibi:A (1.473) BS01 1D8 ? N/A Q05127 24495995 MOAD: Kd=73uM
    PDBbind: -logKd/Ki=4.14, Kd=73.0uM
    13611 4ibj:A (1.54) BS01 1D9 ? N/A Q05127 24495995 MOAD: Kd=47uM
    PDBbind: -logKd/Ki=4.33, Kd=47.0uM
    13612 4ibk:A (1.85) BS01 1DE ? N/A Q05127 24495995 MOAD: Kd=50.4uM
    PDBbind: -logKd/Ki=4.30, Kd=50.4uM
    13613 4ibm:A (1.8) BS01 IR1 2.7.10.1 GO:0004672 ... P06213 23935097 MOAD: ic50=1.8uM
    PDBbind: -logKd/Ki=5.74, IC50=1.8uM
    13614 4idn:A (2.252) BS01 GNP 3.6.5.- GO:0003924 ... Q8WXF7 23334294 MOAD: Kd=5.77uM
    PDBbind: -logKd/Ki=5.24, Kd=5.77uM
    13615 4idn:B (2.252) BS01 GNP 3.6.5.- GO:0003924 ... Q8WXF7 23334294 MOAD: Kd=5.77uM
    PDBbind: -logKd/Ki=5.24, Kd=5.77uM
    13616 4ido:A (2.091) BS01 GDP 3.6.5.- GO:0003924 ... Q8WXF7 23334294 PDBbind: -logKd/Ki=4.93, Kd=11.63uM
    13617 4ido:B (2.091) BS01 GDP 3.6.5.- GO:0003924 ... Q8WXF7 23334294 PDBbind: -logKd/Ki=4.93, Kd=11.63uM
    13618 4idt:A (2.4) BS01 T28 2.7.11.25 GO:0004672 ... Q99558 23374866 MOAD: ic50=0.1uM
    PDBbind: -logKd/Ki=7.00, IC50=0.1uM
    BindingDB: IC50=4600nM
    13619 4idv:A (2.9) BS01 13V 2.7.11.25 GO:0004672 ... Q99558 23374866 PDBbind: -logKd/Ki=7.40, IC50=0.04uM
    BindingDB: IC50=20nM
    13620 4ie0:A (2.53) BS02 PD2 1.14.11.-
    1.14.11.53    		 GO:0001659 ... Q9C0B1 23547775 PDBbind: -logKd/Ki=5.08, IC50=8.3uM
    BindingDB: IC50=8300nM
    13621 4ie2:A (2.2082) BS03 1EC 3.5.3.1 GO:0004053 ... P78540 23453840 MOAD: ic50=4500nM
    PDBbind: -logKd/Ki=5.35, IC50=4.5uM
    13622 4ie3:A (2.3522) BS03 1EE 3.5.3.1 GO:0004053 ... P78540 23453840 MOAD: ic50=980nM
    PDBbind: -logKd/Ki=6.01, IC50=980nM
    13623 4ie4:A (2.5048) BS02 8XQ 1.14.11.-
    1.14.11.53    		 GO:0001659 ... Q9C0B1 23547775 MOAD: ic50=3.3uM
    PDBbind: -logKd/Ki=5.48, IC50=3.3uM
    BindingDB: IC50=3300nM
    13624 4ie5:A (1.95) BS02 MD6 1.14.11.-
    1.14.11.53    		 GO:0001659 ... Q9C0B1 23547775 MOAD: ic50=15uM
    PDBbind: -logKd/Ki=4.82, IC50=15uM
    BindingDB: IC50=15000nM
    13625 4ie6:A (2.5036) BS02 UN9 1.14.11.-
    1.14.11.53    		 GO:0001659 ... Q9C0B1 23547775 MOAD: ic50=2.8uM
    PDBbind: -logKd/Ki=5.55, IC50=2.8uM
    BindingDB: IC50=2800nM
    13626 4ie7:A (2.6004) BS02 RHN 1.14.11.-
    1.14.11.53    		 GO:0001659 ... Q9C0B1 23547775 PDBbind: -logKd/Ki=5.05, IC50=9.0uM
    13627 4ieh:A (2.1) BS01 1E9 ? GO:0042981 ... P10415
    Q07817    		 24900652 MOAD: Kd=14nM
    PDBbind: -logKd/Ki=7.85, Kd=14nM
    13628 4ifh:B (3.286) BS02 1EF 3.4.24.56 GO:0001618 ... P14735 26394692 PDBbind: -logKd/Ki=5.21, IC50=6.1uM
    13629 4igr:A (2.65) BS01 3ZA ? GO:0015276 ... P42264 23414088 PDBbind: -logKd/Ki=7.20, Kd=63nM
    BindingDB: Ki=123nM
    13630 4igt:A (1.24) BS01 3ZA ? GO:0015276 ... P19491 23414088 MOAD: Kd=12.8nM
    PDBbind: -logKd/Ki=7.89, Kd=12.8nM
    BindingDB: Ki=126000nM
    13631 4ih3:A (2.493) BS02 PDC 4.1.1.45 GO:0001760 ... Q8TDX5 25392945 PDBbind: -logKd/Ki=4.82, Ki=15.2uM
    13632 4ih3:F (2.493) BS02 PDC 4.1.1.45 GO:0001760 ... Q8TDX5 25392945 PDBbind: -logKd/Ki=4.82, Ki=15.2uM
    13633 4ih5:A (1.9) BS01 12R 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 23509929 MOAD: Kd=78uM
    PDBbind: -logKd/Ki=4.11, Kd=78uM
    13634 4ih6:A (2.2) BS01 1EP 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 23509929 MOAD: Kd=18uM
    PDBbind: -logKd/Ki=4.74, Kd=18uM
    13635 4ih7:A (2.3) BS01 1ER 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... P26663 23509929 MOAD: Kd=5.8uM
    PDBbind: -logKd/Ki=5.24, Kd=5.8uM
    13636 4ihv:A (2.716) BS01 dna N/A GO:0003677 ... N/A 23661683 PDBbind: Kd=28nM
    13637 4ihv:A (2.716) BS02 dna N/A GO:0003677 ... N/A 23661683 PDBbind: Kd=28nM
    13638 4ihv:B (2.716) BS01 dna N/A GO:0003677 ... N/A 23661683 PDBbind: Kd=28nM
    13639 4ihv:B (2.716) BS02 dna N/A GO:0003677 ... N/A 23661683 PDBbind: Kd=28nM
    13640 4ihw:A (2.7) BS01 dna N/A GO:0003677 ... N/A 23661683 PDBbind: Kd=0.5nM
    13641 4ihw:A (2.7) BS02 dna N/A GO:0003677 ... N/A 23661683 PDBbind: Kd=0.5nM
    13642 4ihw:B (2.7) BS01 dna N/A GO:0003677 ... N/A 23661683 PDBbind: Kd=0.5nM
    13643 4ihw:B (2.7) BS02 dna N/A GO:0003677 ... N/A 23661683 PDBbind: Kd=0.5nM
    13644 4ihx:A (2.8) BS01 dna N/A GO:0003677 ... N/A 23661683 PDBbind: Kd=70nM
    13645 4ihx:A (2.8) BS02 dna N/A GO:0003677 ... N/A 23661683 PDBbind: Kd=70nM
    13646 4ihx:B (2.8) BS01 dna N/A GO:0003677 ... N/A 23661683 PDBbind: Kd=70nM
    13647 4ihx:B (2.8) BS02 dna N/A GO:0003677 ... N/A 23661683 PDBbind: Kd=70nM
    13648 4ihy:A (2.9) BS01 dna N/A GO:0003677 ... N/A 23661683 PDBbind: Kd=1.7nM
    13649 4ihy:A (2.9) BS02 dna N/A GO:0003677 ... N/A 23661683 PDBbind: Kd=1.7nM
    13650 4ihy:B (2.9) BS01 dna N/A GO:0003677 ... N/A 23661683 PDBbind: Kd=1.7nM
    13651 4ihy:B (2.9) BS02 dna N/A GO:0003677 ... N/A 23661683 PDBbind: Kd=1.7nM
    13652 4ii9:A (1.66) BS03 UDP 2.3.2.10 GO:0008360 ... Q9EY50 23744707 PDBbind: -logKd/Ki=6.03, IC50=0.93uM
    13653 4iic:A (1.9) BS08 IFM 3.2.1.21 GO:0004553 ... P48825 23537284 MOAD: Ki=14uM
    PDBbind: -logKd/Ki=4.85, Ki=14uM
    13654 4iid:A (2.3) BS06 NOJ 3.2.1.21 GO:0004553 ... P48825 23537284 MOAD: Ki=2.4uM
    PDBbind: -logKd/Ki=5.62, Ki=2.4uM
    13655 4iie:A (2.0) BS07 CGB 3.2.1.21 GO:0004553 ... P48825 23537284 MOAD: Ki=4600uM
    PDBbind: -logKd/Ki=2.34, Ki=4.6mM
    13656 4iif:A (2.45) BS05 CTS 3.2.1.21 GO:0004553 ... P48825 23537284 MOAD: Ki=6.6uM
    PDBbind: -logKd/Ki=5.18, Ki=6.6uM
    13657 4ij1:A (1.79) BS01 17C 2.4.2.18 GO:0000162 ... P9WFX5 24623674 MOAD: Ki=4uM
    PDBbind: -logKd/Ki=5.40, Ki=4uM
    13658 4ijh:A (1.498) BS01 1EJ ? GO:0003677 ... P27694 23914285 MOAD: Kd=47uM
    PDBbind: -logKd/Ki=4.33, Kd=47uM
    13659 4ijh:A (1.498) BS02 1EJ ? GO:0003677 ... P27694 23914285 MOAD: Kd=47uM
    PDBbind: -logKd/Ki=4.33, Kd=47uM
    13660 4ijh:A (1.498) BS03 1EJ ? GO:0003677 ... P27694 23914285 MOAD: Kd=47uM
    PDBbind: -logKd/Ki=4.33, Kd=47uM
    13661 4ijl:A (1.7) BS01 1EK ? GO:0003677 ... P27694 23914285 MOAD: Kd=135uM
    PDBbind: -logKd/Ki=3.87, Kd=135uM
    BindingDB: Kd=135000nM
    13662 4ijl:A (1.7) BS02 1EK ? GO:0003677 ... P27694 23914285 MOAD: Kd=135uM
    PDBbind: -logKd/Ki=3.87, Kd=135uM
    BindingDB: Kd=135000nM
    13663 4ijp:A (2.25) BS01 1EH 2.7.11.1 GO:0004672 ... Q13523 24003220 MOAD: ic50=0.016uM
    PDBbind: -logKd/Ki=7.80, IC50=0.016uM
    BindingDB: IC50=16nM
    13664 4ijq:A (2.004) BS01 SV2 2.4.2.8 GO:0000166 ... P00492 23448281 MOAD: Ki=0.03uM
    PDBbind: -logKd/Ki=7.52, Ki=0.03uM
    13665 4ikr:A (1.78) BS03 PVP 3.4.11.18 GO:0006508 ... P53582 23767698 MOAD: ic50=0.59uM
    PDBbind: -logKd/Ki=6.23, IC50=0.59uM
    BindingDB: IC50=1100nM
    13666 4iks:A (1.7) BS01 TFD 3.4.11.18 GO:0006508 ... P53582 23767698 MOAD: ic50=7.23uM
    PDBbind: -logKd/Ki=5.14, IC50=7.23uM
    BindingDB: IC50=1000nM
    13667 4ikt:A (1.6) BS01 TFV 3.4.11.18 GO:0006508 ... P53582 23767698 MOAD: ic50=0.67uM
    PDBbind: -logKd/Ki=6.17, IC50=0.67uM
    BindingDB: IC50=2000nM, EC50=280nM
    13668 4iku:A (1.3) BS01 SHX 3.4.11.18 GO:0006508 ... P53582 23767698 MOAD: ic50=1.79uM
    PDBbind: -logKd/Ki=5.75, IC50=1.79uM
    13669 4im0:A (2.4001) BS01 1FV 2.7.11.1 GO:0002218 ... Q9UHD2 23453972 PDBbind: -logKd/Ki=7.72, IC50=19nM
    BindingDB: Kd=79nM
    13670 4inb:A (1.8) BS01 1F6 ? GO:0016032 ... A9PKC6 23401268 MOAD: ic50=0.89uM
    PDBbind: -logKd/Ki=6.05, IC50=0.89uM
    13671 4inr:H (2.7) BS01 1G1 3.4.25.1 GO:0004298 ... P25043 23320547 PDBbind: -logKd/Ki=5.59, IC50=2.6uM
    13672 4inr:I (2.7) BS01 1G1 3.4.25.1 GO:0000502 ... P25451 23320547 PDBbind: -logKd/Ki=5.59, IC50=2.6uM
    13673 4inr:Z (2.7) BS01 1G1 3.4.25.1 GO:0000502 ... P23724 23320547 PDBbind: -logKd/Ki=5.59, IC50=2.6uM
    13674 4int:H (2.9) BS01 1G5 3.4.25.1 GO:0004298 ... P25043 23320547 PDBbind: -logKd/Ki=5.80, IC50=1.6uM
    13675 4int:I (2.9) BS01 1G5 3.4.25.1 GO:0000502 ... P25451 23320547 PDBbind: -logKd/Ki=5.80, IC50=1.6uM
    13676 4int:Z (2.9) BS01 1G5 3.4.25.1 GO:0000502 ... P23724 23320547 PDBbind: -logKd/Ki=5.80, IC50=1.6uM
    13677 4inu:H (3.1) BS01 1G6 3.4.25.1 GO:0004298 ... P25043 23320547 PDBbind: -logKd/Ki=9.26, IC50=0.55nM
    13678 4inu:I (3.1) BS01 1G6 3.4.25.1 GO:0000502 ... P25451 23320547 PDBbind: -logKd/Ki=9.26, IC50=0.55nM
    13679 4inu:Z (3.1) BS01 1G6 3.4.25.1 GO:0000502 ... P23724 23320547 PDBbind: -logKd/Ki=9.26, IC50=0.55nM
    13680 4io2:A (1.37) BS02 GLU ? GO:0015276 ... E9P5T5 23434404 MOAD: Kd=203nM
    PDBbind: -logKd/Ki=6.70, Kd=0.2uM
    13681 4io3:A (1.66) BS01 ASP ? GO:0015276 ... E9P5T5 23434404 MOAD: Kd=875nM
    PDBbind: -logKd/Ki=6.06, Kd=0.87uM
    13682 4io4:A (1.941) BS01 SER ? GO:0015276 ... E9P5T5 23434404 MOAD: Kd=24uM
    PDBbind: -logKd/Ki=4.61, Kd=24.5uM
    13683 4io5:A (1.721) BS01 ALA ? GO:0015276 ... E9P5T5 23434404 MOAD: Kd=9uM
    PDBbind: -logKd/Ki=5.03, Kd=9.27uM
    13684 4io6:A (1.6) BS01 MET ? GO:0015276 ... E9P5T5 23434404 MOAD: Kd=15uM
    PDBbind: -logKd/Ki=4.82, Kd=15.1uM
    13685 4io7:A (1.92) BS01 PHE ? GO:0015276 ... E9P5T5 23434404 PDBbind: -logKd/Ki=3.68, Kd=211uM
    13686 4io8:A (2.58) BS01 3FD ? GO:0005524 ... P0DMV8 24265689 PDBbind: -logKd/Ki=6.64, Kd=228nM
    BindingDB: Kd=3e+2nM, Ki=1.2e+2nM, IC50=500nM
    13687 4ipf:A (1.7) BS01 1F0 2.3.2.27 GO:0005634 ... P56273 23400593 MOAD: ic50=18nM
    PDBbind: -logKd/Ki=7.74, IC50=18nM
    13688 4iq6:A (3.12) BS01 IQ6 2.7.11.1
    2.7.11.26    		 GO:0001837 ... P49841 24900653 PDBbind: -logKd/Ki=7.24, Ki=58nM
    BindingDB: Ki=58nM
    13689 4iqr:A (2.9) BS01 dna ? GO:0000978 ... P41235 23485969 PDBbind: Kd=80nM
    13690 4iqr:A (2.9) BS02 dna ? GO:0000978 ... P41235 23485969 PDBbind: Kd=80nM
    13691 4iqr:B (2.9) BS01 dna ? GO:0000978 ... P41235 23485969 PDBbind: Kd=80nM
    13692 4iqr:B (2.9) BS02 dna ? GO:0000978 ... P41235 23485969 PDBbind: Kd=80nM
    13693 4iqr:E (2.9) BS01 dna ? GO:0000978 ... P41235 23485969 PDBbind: Kd=80nM
    13694 4iqr:E (2.9) BS02 dna ? GO:0000978 ... P41235 23485969 PDBbind: Kd=80nM
    13695 4iqr:F (2.9) BS01 dna ? GO:0000978 ... P41235 23485969 PDBbind: Kd=80nM
    13696 4iqr:F (2.9) BS02 dna ? GO:0000978 ... P41235 23485969 PDBbind: Kd=80nM
    13697 4iqt:A (2.6) BS01 1FO 2.7.7.31
    3.1.11.-    		 GO:0003677 ... P09838 23968551 PDBbind: -logKd/Ki=6.11, IC50=0.78uM
    13698 4iqu:A (2.4) BS01 1FQ 2.7.7.31
    3.1.11.-    		 GO:0003677 ... P09838 23968551 PDBbind: -logKd/Ki=6.24, IC50=0.58uM
    13699 4ir5:A (1.7) BS01 IR5 ? N/A Q9UIF8 25799074 PDBbind: -logKd/Ki=6.21, IC50=0.61uM
    BindingDB: IC50=610nM
    13700 4ir6:A (1.8) BS01 IR6 ? N/A Q9UIF8 25799074 PDBbind: -logKd/Ki=6.08, IC50=0.84uM
    BindingDB: IC50=840nM
    13701 4iri:A (2.77) BS01 dna ? GO:0003700 ... P11308 23898196 PDBbind: Kd=37nM
    13702 4iri:A (2.77) BS02 dna ? GO:0003700 ... P11308 23898196 PDBbind: Kd=37nM
    13703 4irx:A (1.451) BS01 INS ? N/A A0A0H3C834 23504019 MOAD: Kd=0.76uM
    PDBbind: -logKd/Ki=6.12, Kd=0.76uM
    13704 4is1:C (2.1) BS01 dna ? N/A O75362 23436653 PDBbind: Kd=25nM
    13705 4is1:C (2.1) BS02 dna ? N/A O75362 23436653 PDBbind: Kd=25nM
    13706 4is1:D (2.1) BS01 dna ? N/A O75362 23436653 PDBbind: Kd=25nM
    13707 4is1:D (2.1) BS02 dna ? N/A O75362 23436653 PDBbind: Kd=25nM
    13708 4ish:H (1.82) BS01 1GE 3.4.21.21 GO:0004252 ... P08709 23478148 MOAD: Ki=1.9nM
    PDBbind: -logKd/Ki=8.72, Ki=1.9nM
    BindingDB: Ki=1.9nM
    13709 4isi:H (1.94) BS01 1GG 3.4.21.21 GO:0004252 ... P08709 23416003 MOAD: Ki=7.3nM
    PDBbind: -logKd/Ki=8.14, Ki=7.3nM
    13710 4isu:A (2.3) BS01 IKM ? GO:0015276 ... P19491 23432124 MOAD: Ki=0.21mM
    PDBbind: -logKd/Ki=3.68, Ki=0.21mM
    13711 4ith:A (2.25) BS01 RCM 2.7.11.1 GO:0004672 ... Q13546 23473668 MOAD: ic50=0.3169uM
    PDBbind: -logKd/Ki=6.50, IC50=316.9nM
    BindingDB: IC50=200nM, EC50=18nM
    13712 4iti:A (2.86) BS01 1HW 2.7.11.1 GO:0004672 ... Q13546 23473668 PDBbind: -logKd/Ki=6.36, IC50=439.5nM
    13713 4itj:A (1.8) BS01 1HX 2.7.11.1 GO:0004672 ... Q13546 23473668 MOAD: ic50=0.3772uM
    PDBbind: -logKd/Ki=6.42, IC50=377.2nM
    13714 4itp:A (1.697) BS02 1GD 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 24012377 MOAD: Ki=54nM
    PDBbind: -logKd/Ki=7.27, Ki=54nM
    BindingDB: Ki=54nM
    13715 4iu0:A (1.77) BS03 ABH 3.5.3.1 GO:0000050 ... Q6TUJ5 23583962 MOAD: Ki=1.3uM
    PDBbind: -logKd/Ki=5.89, Ki=1.3uM
    13716 4iu1:A (1.95) BS03 NNH 3.5.3.1 GO:0000050 ... Q6TUJ5 23583962 MOAD: Ki~50uM
    PDBbind: -logKd/Ki=4.30, Ki~50uM
    13717 4iu4:A (1.8) BS03 S2C 3.5.3.1 GO:0000050 ... Q6TUJ5 23583962 MOAD: Ki~10uM
    PDBbind: -logKd/Ki=5.00, Ki~10uM
    13718 4iue:A (2.38) BS02 AJ4 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 23672613 MOAD: Kd=0.28uM
    PDBbind: -logKd/Ki=6.55, Kd=0.28uM
    13719 4iuo:A (1.8) BS01 QIC 4.2.1.10 GO:0003855 ... P58687 24437575 PDBbind: -logKd/Ki=3.64, Kd=0.23mM
    13720 4iva:A (1.5) BS01 1J5 2.7.10.2 GO:0004672 ... O60674 23659214 PDBbind: -logKd/Ki=7.16, Ki=68.4nM
    13721 4ivb:A (1.9) BS01 1J5 2.7.10.2 GO:0004672 ... P23458 23659214 MOAD: Ki=1.9nM
    PDBbind: -logKd/Ki=8.72, Ki=1.9nM
    BindingDB: EC50=130nM, Ki=1.9nM
    13722 4ivc:A (2.35) BS01 1J6 2.7.10.2 GO:0004672 ... P23458 23659214 MOAD: Ki=0.1nM
    PDBbind: -logKd/Ki=10.00, Ki=0.1nM
    BindingDB: EC50=28nM, IC50=<0.200nM, Ki=0.100000nM
    13723 4ivd:A (1.93) BS01 15T 2.7.10.2 GO:0004672 ... P23458 23659214 MOAD: Ki=0.3nM
    PDBbind: -logKd/Ki=9.52, Ki=0.3nM
    BindingDB: EC50=43nM, Ki=0.300000nM
    13724 4ivk:A (1.8) BS01 CEP 3.1.1.1 N/A K4HQE7 23737193 PDBbind: -logKd/Ki=3.85, Ki=140uM
    13725 4ivs:A (2.636) BS01 VSI 3.4.23.46 GO:0004190 ... P56817 23681056 PDBbind: -logKd/Ki=7.36, IC50=0.044uM
    13726 4ivt:A (1.6) BS01 VTI 3.4.23.46 GO:0004190 ... P56817 23681056 MOAD: ic50=1.01uM
    PDBbind: -logKd/Ki=6.00, IC50=1.01uM
    13727 4ivz:A (3.1) BS01 dna ? GO:0003677 ... Q8GGH0 24887147 PDBbind: Kd=1.8nM
    13728 4ivz:A (3.1) BS02 dna ? GO:0003677 ... Q8GGH0 24887147 PDBbind: Kd=1.8nM
    13729 4ivz:B (3.1) BS01 dna ? GO:0003677 ... Q8GGH0 24887147 PDBbind: Kd=1.8nM
    13730 4ivz:B (3.1) BS02 dna ? GO:0003677 ... Q8GGH0 24887147 PDBbind: Kd=1.8nM
    13731 4ivz:E (3.1) BS01 dna ? GO:0003677 ... Q8GGH0 24887147 PDBbind: Kd=1.8nM
    13732 4ivz:E (3.1) BS02 dna ? GO:0003677 ... Q8GGH0 24887147 PDBbind: Kd=1.8nM
    13733 4ivz:F (3.1) BS01 dna ? GO:0003677 ... Q8GGH0 24887147 PDBbind: Kd=1.8nM
    13734 4ivz:F (3.1) BS02 dna ? GO:0003677 ... Q8GGH0 24887147 PDBbind: Kd=1.8nM
    13735 4iwd:A (1.99) BS01 1JC 2.7.10.1 GO:0004672 ... P08581 23379595 MOAD: ic50=1nM
    PDBbind: -logKd/Ki=9.00, IC50=1nM
    BindingDB: IC50=1.000000nM
    13736 4iwz:A (1.598) BS01 1GO 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 23993330 MOAD: Ki=51nM
    PDBbind: -logKd/Ki=7.29, Ki=51nM
    BindingDB: Ki=51nM
    13737 4ixh:A (2.105) BS02 Q21 1.1.1.205 GO:0003824 ... Q8T6T2 23668331 MOAD: ic50=6.1nM
    PDBbind: -logKd/Ki=8.21, IC50=6.1nM
    BindingDB: IC50=8.0nM, Ki=13nM
    13738 4ixh:A (2.105) BS03 Q21 1.1.1.205 GO:0003824 ... Q8T6T2 23668331 MOAD: ic50=6.1nM
    PDBbind: -logKd/Ki=8.21, IC50=6.1nM
    BindingDB: IC50=8.0nM, Ki=13nM
    13739 4ixh:D (2.105) BS01 Q21 1.1.1.205 GO:0003824 ... Q8T6T2 23668331 PDBbind: -logKd/Ki=8.21, IC50=6.1nM
    BindingDB: IC50=8.0nM, Ki=13nM
    13740 4ixh:D (2.105) BS02 Q21 1.1.1.205 GO:0003824 ... Q8T6T2 23668331 PDBbind: -logKd/Ki=8.21, IC50=6.1nM
    BindingDB: IC50=8.0nM, Ki=13nM
    13741 4ixu:A (1.9) BS03 38I 3.5.3.1 GO:0004053 ... P78540 23886684 MOAD: ic50=23nM
    PDBbind: -logKd/Ki=7.64, IC50=23nM
    13742 4ixv:A (2.3) BS03 XA1 3.5.3.1 GO:0004053 ... P78540 23886684 MOAD: ic50=240nM
    PDBbind: -logKd/Ki=6.62, IC50=240nM
    13743 4iz0:A (2.22) BS01 2BI 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 23545108 MOAD: ic50~100uM
    PDBbind: -logKd/Ki=4.00, IC50=100uM
    13744 4iz0:A (2.22) BS02 2BI 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 23545108 MOAD: ic50~100uM
    PDBbind: -logKd/Ki=4.00, IC50=100uM
    13745 4izm:A (4.5) BS03 ASP ? GO:0005283 ... O59010 23563139 PDBbind: -logKd/Ki=6.66, Kd=220nM
    13746 4izy:A (2.3) BS02 1J2 2.7.11.24 GO:0004672 ... P45983 23664880 MOAD: ic50=3nM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=3.1nM, Kd=0.140000nM
    13747 4j03:A (2.92) BS02 FVS 3.1.3.76
    3.3.2.10    		 GO:0000287 ... P34913 23684894 PDBbind: -logKd/Ki=7.59, Ki=26nM
    13748 4j04:A (2.0) BS01 1JF 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 23545108 MOAD: ic50=11uM
    PDBbind: -logKd/Ki=4.96, IC50=11uM
    13749 4j04:A (2.0) BS02 1JF 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 23545108 MOAD: ic50=11uM
    PDBbind: -logKd/Ki=4.96, IC50=11uM
    13750 4j06:A (2.0) BS01 1JG 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 23545108 MOAD: ic50=4.6uM
    PDBbind: -logKd/Ki=5.34, IC50=4.6uM
    13751 4j08:A (2.1) BS01 1JH 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 23545108 MOAD: ic50=0.22uM
    PDBbind: -logKd/Ki=6.66, IC50=0.22uM
    13752 4j0a:A (2.4) BS01 1JL 2.7.7.48
    3.4.21.98
    3.4.22.-
    3.6.1.15
    3.6.4.13    		 GO:0003723 ... O92972 23545108 MOAD: ic50=0.16uM
    PDBbind: -logKd/Ki=6.80, IC50=0.16uM
    13753 4j0p:A (1.97) BS01 1H8 3.4.23.46 GO:0004190 ... P56817 23590342 MOAD: ic50=0.051uM
    PDBbind: -logKd/Ki=7.29, IC50=51nM
    BindingDB: IC50=54nM
    13754 4j0r:A (1.72) BS01 1H2 ? N/A O60885 23517011 MOAD: ic50=0.386uM
    PDBbind: -logKd/Ki=6.41, IC50=0.386uM
    BindingDB: IC50=386nM, Kd=360nM
    13755 4j0s:A (1.84) BS01 1H3 ? N/A O60885 23517011 MOAD: ic50=0.382uM
    PDBbind: -logKd/Ki=6.42, IC50=0.382uM
    BindingDB: IC50=382nM, Kd=390nM
    13756 4j0t:A (2.05) BS01 6T9 3.4.23.46 GO:0004190 ... P56817 23590342 MOAD: ic50=184uM
    PDBbind: -logKd/Ki=6.74, IC50=0.184uM
    13757 4j0v:A (1.94) BS01 1H7 3.4.23.46 GO:0004190 ... P56817 23590342 MOAD: ic50=0.028uM
    PDBbind: -logKd/Ki=7.55, IC50=28nM
    BindingDB: IC50=1nM
    13758 4j0y:A (1.77) BS01 1H6 3.4.23.46 GO:0004190 ... P56817 23590342 MOAD: ic50=0.435uM
    PDBbind: -logKd/Ki=6.36, IC50=0.435uM
    BindingDB: IC50=1170nM
    13759 4j0z:A (2.13) BS01 1H5 3.4.23.46 GO:0004190 ... P56817 23590342 MOAD: ic50=0.077uM
    PDBbind: -logKd/Ki=7.11, IC50=77nM
    13760 4j17:A (1.81) BS01 1HQ 3.4.23.46 GO:0004190 ... P56817 23590342 MOAD: ic50=0.054uM
    PDBbind: -logKd/Ki=7.27, IC50=54nM
    BindingDB: IC50=46nM
    13761 4j1c:A (2.01) BS01 1HO 3.4.23.46 GO:0004190 ... P56817 23590342 MOAD: ic50=0.049uM
    PDBbind: -logKd/Ki=7.31, IC50=49nM
    13762 4j1e:A (1.78) BS01 1HM 3.4.23.46 GO:0004190 ... P56817 23590342 MOAD: ic50=0.019uM
    PDBbind: -logKd/Ki=7.72, IC50=19nM
    BindingDB: IC50=17.9nM
    13763 4j1f:A (2.25) BS01 1HL 3.4.23.46 GO:0004190 ... P56817 23590342 MOAD: ic50=0.012uM
    PDBbind: -logKd/Ki=7.92, IC50=12nM
    BindingDB: IC50=11.5nM
    13764 4j1g:A (2.789) BS01 rna ? GO:0003723 ... F2WAD7 23569220 PDBbind: Kd=0.166uM
    13765 4j1g:B (2.789) BS01 rna ? GO:0003723 ... F2WAD7 23569220 PDBbind: Kd=0.166uM
    13766 4j1g:C (2.789) BS01 rna ? GO:0003723 ... F2WAD7 23569220 PDBbind: Kd=0.166uM
    13767 4j1g:D (2.789) BS01 rna ? GO:0003723 ... F2WAD7 23569220 PDBbind: Kd=0.166uM
    13768 4j1h:A (2.2) BS01 1HJ 3.4.23.46 GO:0004190 ... P56817 23590342 MOAD: ic50=0.776uM
    PDBbind: -logKd/Ki=6.11, IC50=0.776uM
    13769 4j1i:A (2.05) BS01 1HH 3.4.23.46 GO:0004190 ... P56817 23590342 MOAD: ic50=0.04uM
    PDBbind: -logKd/Ki=7.40, IC50=40nM
    13770 4j1j:A (2.65) BS01 dna ? GO:0003723 ... F2WAD7 23569220 PDBbind: Kd=0.505uM
    13771 4j1j:A (2.65) BS02 dna ? GO:0003723 ... F2WAD7 23569220 PDBbind: Kd=0.505uM
    13772 4j1j:B (2.65) BS01 dna ? GO:0003723 ... F2WAD7 23569220 PDBbind: Kd=0.505uM
    13773 4j1j:C (2.65) BS01 dna ? GO:0003723 ... F2WAD7 23569220 PDBbind: Kd=0.505uM
    13774 4j1j:C (2.65) BS02 dna ? GO:0003723 ... F2WAD7 23569220 PDBbind: Kd=0.505uM
    13775 4j1j:D (2.65) BS01 dna ? GO:0003723 ... F2WAD7 23569220 PDBbind: Kd=0.505uM
    13776 4j1k:A (2.18) BS01 1HG 3.4.23.46 GO:0004190 ... P56817 23590342 MOAD: ic50=0.013uM
    PDBbind: -logKd/Ki=7.89, IC50=13nM
    13777 4j1p:A (1.08) BS01 1K0 ? N/A P25440 24391744 MOAD: Kd=0.206uM
    PDBbind: -logKd/Ki=7.05, IC50=0.09uM
    BindingDB: Kd=5800nM, IC50=251nM
    13778 4j21:A (1.93) BS02 AJ6 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 23672613 MOAD: Kd=0.039uM
    PDBbind: -logKd/Ki=7.41, Kd=39nM
    13779 4j22:A (2.12) BS02 AJ7 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 23672613 MOAD: Kd=0.018uM
    PDBbind: -logKd/Ki=7.74, Kd=18nM
    13780 4j28:A (1.73) BS01 EAT ? GO:0004560 ... Q8A3I4 23830696 MOAD: Ki=2uM
    PDBbind: -logKd/Ki=5.70, Ki=2.0uM
    13781 4j2t:A (3.2) BS01 1HT 7.2.2.10 GO:0000166 ... P04191 23574308 PDBbind: -logKd/Ki=7.96, Kd=11nM
    13782 4j2x:A (2.85) BS03 dna ? GO:0000978 ... P31266 24290140 PDBbind: Kd=0.011uM
    13783 4j2x:A (2.85) BS04 dna ? GO:0000978 ... P31266 24290140 PDBbind: Kd=0.011uM
    13784 4j2x:C (2.85) BS03 dna ? GO:0000978 ... P31266 24290140 PDBbind: Kd=0.011uM
    13785 4j2x:C (2.85) BS04 dna ? GO:0000978 ... P31266 24290140 PDBbind: Kd=0.011uM
    13786 4j3d:A (2.0) BS03 1JS 3.5.1.108 GO:0006796 ... P47205 23499237 MOAD: ic50=5.3nM
    PDBbind: -logKd/Ki=8.28, IC50=5.3nM
    13787 4j3e:A (1.91) BS01 NUT 2.3.2.27 GO:0005634 ... P56273 24900694 MOAD: ic50=0.088uM
    PDBbind: -logKd/Ki=7.06, IC50=0.088uM
    13788 4j3i:A (1.24) BS01 1K0 ? N/A O60885 24391744 MOAD: Kd=8.93uM
    PDBbind: -logKd/Ki=5.74, IC50=1.8uM
    BindingDB: IC50=510nM, Kd=1100nM
    13789 4j3j:A (3.2) BS01 D3C 3.4.14.5 GO:0001618 ... P27487 23671024 PDBbind: -logKd/Ki=7.51, IC50=0.031uM
    13790 4j3l:A (2.09) BS02 AJ5 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 23672613 MOAD: Kd=0.016uM
    PDBbind: -logKd/Ki=7.80, Kd=16nM
    13791 4j3m:A (1.9) BS02 AJ8 2.4.2.-
    2.4.2.30    		 GO:0003950 ... Q9H2K2 23672613 MOAD: ic50=0.021uM
    PDBbind: -logKd/Ki=7.68, IC50=21nM
    13792 4j3u:A (1.7) BS01 SGD 3.2.1.41 GO:0000272 ... Q9FYY0 25562209 PDBbind: -logKd/Ki=6.34, Ki=0.46uM
    13793 4j3u:A (1.7) BS02 GLC 3.2.1.41 GO:0000272 ... Q9FYY0 25562209 PDBbind: -logKd/Ki=6.34, Ki=0.46uM
    13794 4j3u:A (1.7) BS03 GLC 3.2.1.41 GO:0000272 ... Q9FYY0 25562209 PDBbind: -logKd/Ki=6.34, Ki=0.46uM
    13795 4j3u:A (1.7) BS04 GLC 3.2.1.41 GO:0000272 ... Q9FYY0 25562209 PDBbind: -logKd/Ki=6.34, Ki=0.46uM
    13796 4j4n:A (2.75) BS01 D44 5.2.1.8 GO:0003755 ... Q8I4V8 23974147 PDBbind: -logKd/Ki=6.88, IC50=132nM
    13797 4j4o:A (1.73) BS01 D44 5.2.1.8 GO:0003755 ... A5K8X6 23974147 PDBbind: -logKd/Ki=6.90, IC50=125nM
    13798 4j4v:A (2.303) BS01 SVR ? GO:0003723 ... I6WJ72 23576501 PDBbind: -logKd/Ki=6.36, Kd=0.44uM
    13799 4j4v:B (2.303) BS01 SVR ? GO:0003723 ... I6WJ72 23576501 PDBbind: -logKd/Ki=6.36, Kd=0.44uM
    13800 4j4v:E (2.303) BS01 SVR ? GO:0003723 ... I6WJ72 23576501 PDBbind: -logKd/Ki=6.36, Kd=0.44uM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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