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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    13001 4fb3:A (3.79) BS02 dna 3.6.4.- GO:0003688 ... P0DOJ4 24109229 PDBbind: Kd=38nM
    13002 4fb3:B (3.79) BS01 dna 3.6.4.- GO:0003688 ... P0DOJ4 24109229 PDBbind: Kd=38nM
    13003 4fb3:B (3.79) BS02 dna 3.6.4.- GO:0003688 ... P0DOJ4 24109229 PDBbind: Kd=38nM
    13004 4fb3:E (3.79) BS01 dna 3.6.4.- GO:0003688 ... P0DOJ4 24109229 PDBbind: Kd=38nM
    13005 4fb3:E (3.79) BS02 dna 3.6.4.- GO:0003688 ... P0DOJ4 24109229 PDBbind: Kd=38nM
    13006 4fbe:A (1.88) BS01 PBD 2.3.2.5 GO:0005576 ... Q86PD7 22897232 PDBbind: -logKd/Ki=6.99, Ki=101.3nM
    13007 4fc0:A (2.95) BS01 0T2 2.7.11.1 GO:0004672 ... P15056 22883026 PDBbind: -logKd/Ki=7.16, IC50=69nM
    BindingDB: IC50=69nM
    13008 4fcb:A (2.1) BS02 0T7 3.1.4.17 GO:0004114 ... Q9Y233 22902656 MOAD: ic50=2.9nM
    PDBbind: -logKd/Ki=8.54, IC50=2.9nM
    13009 4fcd:A (2.02) BS02 0T6 3.1.4.17 GO:0004114 ... Q9Y233 22902656 MOAD: ic50=0.28nM
    PDBbind: -logKd/Ki=9.55, IC50=0.28nM
    BindingDB: IC50=0.28nM
    13010 4fcf:A (1.09) BS01 MA4 3.5.2.6 GO:0008800 ... P0AD64 23252553 PDBbind: -logKd/Ki=8.62, Ki=2.4nM
    13011 4fci:A (1.82) BS03 GPA 3.5.3.1 GO:0000050 ... P05089 22869115 PDBbind: -logKd/Ki=1.26, Ki~55mM
    13012 4fck:A (1.9) BS01 GPA 3.5.3.1 GO:0000050 ... P05089 22869115 PDBbind: -logKd/Ki=1.26, Ki~55mM
    13013 4fcq:A (2.151) BS01 2N6 3.6.4.10 GO:0005524 ... P07900 23018093 MOAD: Kd=0.156uM
    PDBbind: -logKd/Ki=7.00, Kd=0.101uM
    13014 4fcr:A (1.698) BS01 0TM 3.6.4.10 GO:0005524 ... P07900 23018093 MOAD: Kd=0.4nM
    PDBbind: -logKd/Ki=9.40, Kd=0.4nM
    13015 4fe6:A (2.0) BS01 0TQ 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03367 22749283 MOAD: Ki<0.1nM
    PDBbind: -logKd/Ki=10.00, Ki<0.10nM
    13016 4fea:A (3.79) BS01 0TE 3.4.22.60 GO:0004197 ... P55210 22795132 PDBbind: -logKd/Ki=6.47, Ki=0.34uM
    13017 4fea:B (3.79) BS01 0TE 3.4.22.60 GO:0004197 ... P55210 22795132 PDBbind: -logKd/Ki=6.47, Ki=0.34uM
    13018 4feq:A (2.2) BS01 0T8 2.7.10.1 GO:0004672 ... P55144 23312472 MOAD: ic50=1.1uM
    PDBbind: -logKd/Ki=5.96, IC50=1.1uM
    13019 4fev:A (1.89) BS02 PP1 N/A GO:0005524 ... N/A 23758273 PDBbind: -logKd/Ki=5.42, Ki=3.8uM
    13020 4few:A (1.98) BS02 PP2 N/A GO:0005524 ... N/A 23758273 PDBbind: -logKd/Ki=5.21, Ki=6.2uM
    13021 4ff8:A (2.4) BS01 14S 2.7.10.1 GO:0004672 ... P55144 23312472 MOAD: ic50=0.4uM
    PDBbind: -logKd/Ki=6.40, IC50=0.40uM
    13022 4ffs:A (1.9) BS01 BIG 3.2.2.30
    3.2.2.9    		 GO:0003824 ... Q9ZMY2 22891633 MOAD: Kd=36pM
    PDBbind: -logKd/Ki=10.44, Kd=36pM
    13023 4fgn:A (3.2) BS01 dna 3.6.4.- GO:0003688 ... P03070 23269808 PDBbind: Kd~12.3nM
    13024 4fgn:A (3.2) BS02 dna 3.6.4.- GO:0003688 ... P03070 23269808 PDBbind: Kd~12.3nM
    13025 4fgn:B (3.2) BS01 dna 3.6.4.- GO:0003688 ... P03070 23269808 PDBbind: Kd~12.3nM
    13026 4fgn:B (3.2) BS02 dna 3.6.4.- GO:0003688 ... P03070 23269808 PDBbind: Kd~12.3nM
    13027 4fgz:A (1.994) BS01 CQA 2.1.1.103 GO:0000139 ... Q8IDQ9 22771008 MOAD: ic50=1350uM
    PDBbind: -logKd/Ki=2.87, IC50=1350uM
    BindingDB: IC50=1350000nM
    13028 4fgz:A (1.994) BS02 CQA 2.1.1.103 GO:0000139 ... Q8IDQ9 22771008 MOAD: ic50=1350uM
    PDBbind: -logKd/Ki=2.87, IC50=1350uM
    BindingDB: IC50=1350000nM
    13029 4fhh:A (2.33) BS02 0U3 ? GO:0003677 ... Q9PTN2 22921063 MOAD: ic50=35nM
    PDBbind: -logKd/Ki=7.46, IC50=35nM
    13030 4fhi:A (2.4) BS02 0S4 ? GO:0003677 ... Q9PTN2 22921063 MOAD: ic50=100nM
    PDBbind: -logKd/Ki=7.00, IC50=100nM
    13031 4fic:A (2.5) BS01 0UL 2.7.10.2 GO:0004672 ... P00523 23534475 MOAD: ic50=20uM
    PDBbind: -logKd/Ki=4.70, IC50=20uM
    BindingDB: IC50=2.0e+4nM
    13032 4fil:A (2.4) BS01 0UE ? GO:0030288 ... A0A0H3JWU6 24606332 MOAD: Kd=0.034uM
    PDBbind: -logKd/Ki=7.47, Kd=0.034uM
    13033 4fiv:A (1.8) BS01 LP1 3.1.13.2
    3.1.26.13    		 GO:0004190 ... Q66972 9827997 MOAD: Ki=300nM
    PDBbind: -logKd/Ki=6.52, Ki=300nM
    13034 4fj5:A (2.05) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 23214497 PDBbind: Kd=8uM
    13035 4fj5:A (2.05) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 23214497 PDBbind: Kd=8uM
    13036 4fj7:A (1.9) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 23214497 PDBbind: Kd=650uM
    13037 4fj7:A (1.9) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 23214497 PDBbind: Kd=650uM
    13038 4fj8:A (2.19) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 23214497 PDBbind: Kd=31uM
    13039 4fj8:A (2.19) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 23214497 PDBbind: Kd=31uM
    13040 4fj9:A (1.97) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 23214497 PDBbind: Kd=16uM
    13041 4fj9:A (1.97) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 23214497 PDBbind: Kd=16uM
    13042 4fjg:A (2.02) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 23214497 PDBbind: Kd=32uM
    13043 4fjg:A (2.02) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 23214497 PDBbind: Kd=32uM
    13044 4fjh:A (2.11) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 23214497 PDBbind: Kd=11uM
    13045 4fjh:A (2.11) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 23214497 PDBbind: Kd=11uM
    13046 4fji:A (2.2) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 23214497 PDBbind: Kd=1460uM
    13047 4fji:A (2.2) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 23214497 PDBbind: Kd=1460uM
    13048 4fjj:A (1.99) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 23214497 PDBbind: Kd=31uM
    13049 4fjj:A (1.99) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 23214497 PDBbind: Kd=31uM
    13050 4fjk:A (2.0) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 23214497 PDBbind: Kd=750uM
    13051 4fjk:A (2.0) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 23214497 PDBbind: Kd=750uM
    13052 4fjl:A (1.87) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 23214497 PDBbind: Kd=2000uM
    13053 4fjl:A (1.87) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 23214497 PDBbind: Kd=2000uM
    13054 4fjm:A (2.02) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 23214497 PDBbind: Kd=160uM
    13055 4fjm:A (2.02) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 23214497 PDBbind: Kd=160uM
    13056 4fjn:A (1.98) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 23214497 PDBbind: Kd=4uM
    13057 4fjn:A (1.98) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 23214497 PDBbind: Kd=4uM
    13058 4fjx:A (2.11) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 23214497 PDBbind: Kd=320uM
    13059 4fjx:A (2.11) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 23214497 PDBbind: Kd=320uM
    13060 4fjz:A (3.0) BS01 4FJ 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 22876881 PDBbind: -logKd/Ki=6.29, Ki=509nM
    BindingDB: Ki=509nM
    13061 4fk0:A (2.18) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 23214497 PDBbind: Kd=9uM
    13062 4fk0:A (2.18) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 23214497 PDBbind: Kd=9uM
    13063 4fk2:A (1.98) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 23214497 PDBbind: Kd=69uM
    13064 4fk2:A (1.98) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 23214497 PDBbind: Kd=69uM
    13065 4fk4:A (1.9) BS01 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 23214497 PDBbind: Kd=390uM
    13066 4fk4:A (1.9) BS02 dna 2.7.7.7
    3.1.11.-    		 GO:0000166 ... Q38087 23214497 PDBbind: Kd=390uM
    13067 4fk6:A (2.2) BS01 0UJ 2.7.10.2 GO:0004672 ... P23458 23107482 MOAD: Ki=0.2nM
    PDBbind: -logKd/Ki=9.70, Ki=0.2nM
    BindingDB: Ki=3.2nM, EC50=355nM, IC50=1.000nM
    13068 4fk7:A (1.78) BS01 P34 2.4.2.- GO:0005576 ... Q4MV79 22992735 MOAD: Kd=5.8uM
    PDBbind: -logKd/Ki=5.24, Kd=5.8uM
    13069 4fkk:A (2.6) BS01 BES 3.4.11.2 GO:0001525 ... P15145 23071329 PDBbind: -logKd/Ki=9.30, Ki=0.5nM
    BindingDB: Ki=4100nM, IC50=9400nM
    13070 4fl1:A (1.79) BS01 ANP 2.7.10.2 GO:0004672 ... P43405 23154170 MOAD: Kd=520uM
    PDBbind: -logKd/Ki=3.28, Kd=520uM
    13071 4fl2:A (2.19) BS02 ANP 2.7.10.2 GO:0001525 ... P43405 23154170 MOAD: Kd=220uM
    PDBbind: -logKd/Ki=3.66, Kd=220uM
    13072 4fl3:A (1.9) BS01 ANP 2.7.10.2 GO:0001525 ... P43405 23154170 MOAD: Kd=150uM
    PDBbind: -logKd/Ki=3.82, Kd=150uM
    13073 4flh:A (2.6) BS01 14K 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 22897589 PDBbind: -logKd/Ki=9.00, Ki=1nM
    BindingDB: Ki=1nM
    13074 4fli:A (1.55) BS03 Y16 3.4.11.18 GO:0006508 ... P53582 22913487 MOAD: ic50=3.59uM
    PDBbind: -logKd/Ki=5.44, IC50=3.59uM
    BindingDB: IC50=3590nM
    13075 4flj:A (1.74) BS03 Y08 3.4.11.18 GO:0006508 ... P53582 22913487 MOAD: ic50=7.45uM
    PDBbind: -logKd/Ki=5.13, IC50=7.45uM
    13076 4flk:A (1.47) BS03 Y10 3.4.11.18 GO:0006508 ... P53582 22913487 MOAD: ic50=5.58uM
    PDBbind: -logKd/Ki=5.25, IC50=5.58uM
    BindingDB: IC50=5580nM
    13077 4fll:A (1.5) BS03 YZ6 3.4.11.18 GO:0006508 ... P53582 22913487 MOAD: ic50=5.14uM
    PDBbind: -logKd/Ki=5.29, IC50=5.14uM
    13078 4flp:A (2.23) BS01 JQ1 ? N/A Q58F21 22901802 MOAD: Kd=190.1nM
    PDBbind: -logKd/Ki=6.72, Kd=190.1nM
    13079 4fm7:A (1.56) BS01 0UP 3.4.23.46 GO:0004190 ... P56817 22984865 MOAD: ic50=0.1uM
    PDBbind: -logKd/Ki=7.24, Kd=57nM
    13080 4fm8:A (1.9) BS01 0UQ 3.4.23.46 GO:0004190 ... P56817 22984865 MOAD: ic50=2.4uM
    PDBbind: -logKd/Ki=5.97, Kd=1.06uM
    13081 4fmu:A (2.1) BS04 0UM 2.1.1.-
    2.1.1.359    		 GO:0005634 ... Q9BYW2 23043551 MOAD: Kd=360nM
    PDBbind: -logKd/Ki=6.44, Kd=360nM
    BindingDB: IC50=800nM
    13082 4fnn:A (2.24) BS01 STE ? GO:0001818 ... Q9GK12 23149273 PDBbind: -logKd/Ki=7.57, Kd=27.2nM
    13083 4fnn:B (2.24) BS01 STE ? GO:0001818 ... Q9GK12 23149273 PDBbind: -logKd/Ki=7.57, Kd=27.2nM
    13084 4fnn:D (2.24) BS01 STE ? GO:0001818 ... Q9GK12 23149273 PDBbind: -logKd/Ki=7.57, Kd=27.2nM
    13085 4fns:A (2.6) BS01 DGJ 3.2.1.22 GO:0004553 ... Q9ALJ4 23012371 PDBbind: -logKd/Ki=6.70, Ki=0.2uM
    13086 4fns:D (2.6) BS01 DGJ 3.2.1.22 GO:0004553 ... Q9ALJ4 23012371 PDBbind: -logKd/Ki=6.70, Ki=0.2uM
    13087 4fny:A (2.45) BS01 I3K 2.7.10.1 GO:0004672 ... Q9UM73 22932897 MOAD: ic50=0.016uM
    PDBbind: -logKd/Ki=7.80, IC50=0.016uM
    13088 4fnz:A (2.6) BS01 NZF 2.7.10.1 GO:0004672 ... Q9UM73 22932897 PDBbind: -logKd/Ki=7.80, IC50=0.016uM
    BindingDB: IC50=16nM
    13089 4fob:A (1.9) BS01 0US 2.7.10.1 GO:0004672 ... Q9UM73 22734674 MOAD: ic50=0.005uM
    PDBbind: -logKd/Ki=8.30, IC50=5nM
    BindingDB: IC50=5nM
    13090 4foc:A (1.7) BS01 0UU 2.7.10.1 GO:0004672 ... Q9UM73 22734674 MOAD: ic50=0.003uM
    PDBbind: -logKd/Ki=8.52, IC50=3nM
    BindingDB: IC50=3nM
    13091 4fod:A (2.0) BS01 0UV 2.7.10.1 GO:0004672 ... Q9UM73 22734674 MOAD: ic50=0.0012uM
    PDBbind: -logKd/Ki=8.92, IC50=1.2nM
    13092 4fp1:A (1.68) BS02 BFM 5.1.2.2 GO:0000287 ... P11444 24472022 MOAD: Ki=0.027mM
    PDBbind: -logKd/Ki=4.57, Ki=0.027mM
    13093 4fp1:B (1.68) BS02 BFM 5.1.2.2 GO:0000287 ... P11444 24472022 MOAD: Ki=0.027mM
    PDBbind: -logKd/Ki=4.57, Ki=0.027mM
    13094 4fpf:A (2.23) BS01 JKK 3.2.1.18 GO:0004308 ... Q54727 23070966 MOAD: ic50=38.9uM
    PDBbind: -logKd/Ki=4.41, IC50=38.9uM
    13095 4fpk:A (2.4) BS01 IJ1 3.2.1.18 GO:0004308 ... Q54727 23070966 MOAD: ic50=57.4uM
    PDBbind: -logKd/Ki=4.24, IC50=57.4uM
    13096 4fqo:A (1.65) BS03 AZ3 ? GO:0005509 ... P02638 23264854 PDBbind: -logKd/Ki=5.16, Kd=6.9uM
    13097 4fri:A (2.3) BS01 DWA 3.4.23.46 GO:0004190 ... P56817 22928914 MOAD: ic50=2.85uM
    PDBbind: -logKd/Ki=5.55, IC50=2.85uM
    13098 4frj:A (1.95) BS01 DWB 3.4.23.46 GO:0004190 ... P56817 22928914 MOAD: ic50=0.28uM
    PDBbind: -logKd/Ki=6.55, IC50=0.28uM
    13099 4frk:A (2.1) BS01 DWD 3.4.23.46 GO:0004190 ... P56817 22928914 MOAD: ic50=0.008uM
    PDBbind: -logKd/Ki=8.10, IC50=8nM
    BindingDB: IC50=36nM
    13100 4frs:A (1.7) BS01 0V6 3.4.23.46 GO:0004190 ... P56817 23412139 PDBbind: -logKd/Ki=8.77, Ki=1.7nM
    13101 4fs3:A (1.8) BS02 0WE 1.3.1.39 GO:0000166 ... Q6GI75 22948878 MOAD: Ki=12.8nM
    PDBbind: -logKd/Ki=7.85, IC50=14nM
    13102 4fs4:A (1.74) BS01 H24 3.4.23.46 GO:0004190 ... P56817 24900403 PDBbind: -logKd/Ki=6.57, Ki=270nM
    BindingDB: IC50=91000nM
    13103 4fse:A (2.65) BS01 0VA 3.4.23.46 GO:0004190 ... P56817 23030502 PDBbind: -logKd/Ki=7.40, Ki=40nM
    13104 4fsl:A (2.5) BS01 0VB 3.4.23.46 GO:0004190 ... P56817 23030502 PDBbind: -logKd/Ki=7.70, Ki=20nM
    13105 4fth:A (3.004) BS01 dna ? GO:0043565 ... O66551 25158097 PDBbind: Kd=200nM
    13106 4fth:A (3.004) BS02 dna ? GO:0043565 ... O66551 25158097 PDBbind: Kd=200nM
    13107 4fth:B (3.004) BS01 dna ? GO:0043565 ... O66551 25158097 PDBbind: Kd=200nM
    13108 4fth:B (3.004) BS02 dna ? GO:0043565 ... O66551 25158097 PDBbind: Kd=200nM
    13109 4fut:A (2.0) BS01 ATP 6.2.1.- GO:0005524 ... Q6ND88 22773649 MOAD: Kd=0.31uM
    PDBbind: -logKd/Ki=6.51, Kd=0.31uM
    13110 4fvq:A (1.75) BS01 ATP 2.7.10.2 GO:0004672 ... O60674 22820988 PDBbind: -logKd/Ki=6.00, Kd=1uM
    13111 4fvr:A (2.0) BS01 ATP 2.7.10.2 GO:0004672 ... O60674 22820988 PDBbind: -logKd/Ki=6.00, Kd=1uM
    13112 4fxf:A (2.55) BS03 FBP 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 23530218 PDBbind: -logKd/Ki=5.19, IC50=6.5uM
    13113 4fxj:A (2.9) BS03 PHE 2.7.10.2
    2.7.11.1
    2.7.1.40    		 GO:0000287 ... P14618 23530218 PDBbind: -logKd/Ki=3.62, IC50=240uM
    13114 4fxp:A (1.954) BS01 ADX 2.7.1.25 GO:0000103 ... Q43295 22810229 PDBbind: -logKd/Ki=4.09, Kd=80.4uM
    13115 4fxq:A (1.9599) BS01 G9L 2.4.2.- GO:0000166 ... Q4MV79 22992735 MOAD: Kd=1.7uM
    PDBbind: -logKd/Ki=5.77, Kd=1.7uM
    13116 4fxy:P (2.8) BS01 0W2 3.4.24.16 GO:0004222 ... P42676 25378390 PDBbind: -logKd/Ki=7.54, Ki=0.029uM
    13117 4fxz:A (2.601) BS01 LEU ? GO:0005886 ... O67854 22836580 PDBbind: -logKd/Ki=7.03, Kd=94.3nM
    13118 4fyh:A (2.44) BS01 TR5 3.2.2.- GO:0009159 ... O35820 23385460 PDBbind: -logKd/Ki=4.85, Ki~14uM
    13119 4fyh:A (2.44) BS02 TR5 3.2.2.- GO:0009159 ... O35820 23385460 PDBbind: -logKd/Ki=4.85, Ki~14uM
    13120 4fyh:B (2.44) BS01 TR5 3.2.2.- GO:0009159 ... O35820 23385460 PDBbind: -logKd/Ki=4.85, Ki~14uM
    13121 4fyh:B (2.44) BS02 TR5 3.2.2.- GO:0009159 ... O35820 23385460 PDBbind: -logKd/Ki=4.85, Ki~14uM
    13122 4fyo:A (1.4) BS01 0VF 2.7.10.2 GO:0004672 ... P43405 23151054 MOAD: ic50=47nM
    PDBbind: -logKd/Ki=7.33, IC50=47nM
    BindingDB: IC50=47nM
    13123 4fz6:A (1.85) BS01 0VG 2.7.10.2 GO:0004672 ... P43405 23151054 MOAD: ic50=127nM
    PDBbind: -logKd/Ki=6.90, IC50=127nM
    BindingDB: IC50=127nM
    13124 4fzj:A (1.63) BS01 0W1 6.3.2.1 GO:0000287 ... P9WIL5 23872845 MOAD: Kd=0.74mM
    PDBbind: -logKd/Ki=3.15, Kd=0.7mM
    13125 4g0c:A (2.0) BS02 AZM 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 22928733 PDBbind: -logKd/Ki=7.92, Ki=12nM
    BindingDB: Ki=12nM, Kd=17nM, IC50=10nM
    13126 4g0k:A (2.557) BS01 0VS 1.8.5.7 GO:0004364 ... P42620 22955277 PDBbind: -logKd/Ki=5.37, Kd=4.3uM
    13127 4g0l:A (2.62) BS01 GSH 1.8.5.7 GO:0004364 ... P42620 22955277 PDBbind: -logKd/Ki=5.19, Kd=6.5uM
    13128 4g0p:A (1.8) BS01 U5P ? GO:0003676 ... O04379 22850669 MOAD: Kd=0.98mM
    PDBbind: -logKd/Ki=3.01, Kd=0.98mM
    13129 4g0q:A (1.8) BS01 C5P ? GO:0003676 ... O04379 22850669 MOAD: Kd=3mM
    PDBbind: -logKd/Ki=2.52, Kd=3.00mM
    13130 4g0y:A (1.65) BS01 AMP ? GO:0003676 ... O04379 22850669 MOAD: Kd=4.99mM
    PDBbind: -logKd/Ki=2.30, Kd=4.99mM
    13131 4g0z:A (1.75) BS01 5GP ? GO:0003676 ... O04379 22850669 MOAD: Kd=6.13mM
    PDBbind: -logKd/Ki=2.21, Kd=6.13mM
    13132 4g11:A (3.4) BS01 0W7 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 22981333 PDBbind: -logKd/Ki=5.00, IC50>10000nM
    BindingDB: IC50=>10000nM
    13133 4g16:A (2.3) BS01 0VM 2.7.11.1 GO:0004672 ... Q9Y6M4 22877629 MOAD: ic50=0.14uM
    PDBbind: -logKd/Ki=6.85, IC50=0.14uM
    13134 4g17:A (2.1) BS01 0VN 2.7.11.1 GO:0004672 ... Q9Y6M4 22877629 MOAD: ic50=0.029uM
    PDBbind: -logKd/Ki=7.54, IC50=0.029uM
    13135 4g19:A (2.0) BS01 GSH ? GO:0016740 ... I6ZUH3 23007392 MOAD: ic50=261.5uM
    PDBbind: -logKd/Ki=3.58, IC50=261.5uM
    13136 4g1f:A (2.9) BS01 0WG 3.4.14.5 GO:0001618 ... P27487 23025999 PDBbind: -logKd/Ki=7.77, IC50=17nM
    BindingDB: IC50=17nM
    13137 4g2f:A (1.699) BS01 C07 2.7.10.1 GO:0004672 ... P29320 24900387 PDBbind: -logKd/Ki=6.80, IC50=0.16uM
    13138 4g2j:A (2.4) BS02 0WF 3.1.4.35 GO:0004114 ... O76083 23025719 MOAD: ic50=11nM
    PDBbind: -logKd/Ki=7.96, IC50=11nM
    BindingDB: IC50=45nM
    13139 4g2l:A (3.0) BS02 0WL 3.1.4.35 GO:0004114 ... O76083 23025719 PDBbind: -logKd/Ki=7.49, IC50=32nM
    BindingDB: IC50=32nM
    13140 4g2r:A (2.28) BS01 H1L 2.1.3.-
    2.1.3.15    		 GO:0003989 ... P9WQH5 25092705 MOAD: Kd=35.8uM
    PDBbind: -logKd/Ki=4.45, Kd=35.8uM
    13141 4g2r:A (2.28) BS02 H1L 2.1.3.-
    2.1.3.15    		 GO:0003989 ... P9WQH5 25092705 MOAD: Kd=35.8uM
    PDBbind: -logKd/Ki=4.45, Kd=35.8uM
    13142 4g2r:A (2.28) BS03 H1L 2.1.3.-
    2.1.3.15    		 GO:0003989 ... P9WQH5 25092705 MOAD: Kd=35.8uM
    PDBbind: -logKd/Ki=4.45, Kd=35.8uM
    13143 4g2r:A (2.28) BS04 H1L 2.1.3.-
    2.1.3.15    		 GO:0003989 ... P9WQH5 25092705 MOAD: Kd=35.8uM
    PDBbind: -logKd/Ki=4.45, Kd=35.8uM
    13144 4g2r:B (2.28) BS01 H1L 2.1.3.-
    2.1.3.15    		 GO:0003989 ... P9WQH5 25092705 MOAD: Kd=35.8uM
    PDBbind: -logKd/Ki=4.45, Kd=35.8uM
    13145 4g2r:B (2.28) BS02 H1L 2.1.3.-
    2.1.3.15    		 GO:0003989 ... P9WQH5 25092705 MOAD: Kd=35.8uM
    PDBbind: -logKd/Ki=4.45, Kd=35.8uM
    13146 4g2r:B (2.28) BS03 H1L 2.1.3.-
    2.1.3.15    		 GO:0003989 ... P9WQH5 25092705 MOAD: Kd=35.8uM
    PDBbind: -logKd/Ki=4.45, Kd=35.8uM
    13147 4g2r:B (2.28) BS04 H1L 2.1.3.-
    2.1.3.15    		 GO:0003989 ... P9WQH5 25092705 MOAD: Kd=35.8uM
    PDBbind: -logKd/Ki=4.45, Kd=35.8uM
    13148 4g2w:A (2.28) BS01 NI0 3.1.4.35 GO:0004114 ... O76074 23137303 MOAD: ic50=1.6nM
    PDBbind: -logKd/Ki=8.80, IC50=1.6nM
    BindingDB: IC50=1.6nM, Kd=1.3nM
    13149 4g2y:A (2.4) BS02 NI5 3.1.4.35 GO:0004114 ... O76074 23137303 MOAD: ic50>1000nM
    PDBbind: -logKd/Ki=6.00, IC50>1000nM
    13150 4g31:A (2.28) BS01 0WH 2.7.11.1 GO:0004672 ... Q9NZJ5 22827572 MOAD: ic50=0.4nM
    PDBbind: -logKd/Ki=9.40, IC50=0.4nM
    BindingDB: IC50=0.400000nM
    13151 4g34:A (2.7) BS01 924 2.7.11.1 GO:0004672 ... Q9NZJ5 22827572 PDBbind: -logKd/Ki=7.93, IC50=11.7nM
    BindingDB: IC50=>300nM
    13152 4g3e:A (2.5) BS01 0WC 2.7.11.25 GO:0004672 ... Q9WUL6 22921830 PDBbind: -logKd/Ki=8.38, Ki=4.2nM
    13153 4g3f:A (1.642) BS01 0WB 2.7.11.25 GO:0004672 ... Q9WUL6 22921830 PDBbind: -logKd/Ki=8.36, Ki=4.4nM
    13154 4g3g:A (2.5) BS01 0WA 2.7.11.25 GO:0004672 ... Q9WUL6 22921830 PDBbind: -logKd/Ki=8.43, Ki=3.7nM
    13155 4g4p:A (1.5) BS01 GLN ? GO:0015276 ... Q837S0 23994008 MOAD: Kd=0.13uM
    PDBbind: -logKd/Ki=6.89, Kd=0.13uM
    13156 4g55:A (1.69) BS01 VH2 ? GO:0005198 ... Q00610 21816279 PDBbind: -logKd/Ki=4.92, IC50=12uM
    13157 4g5f:A (2.33) BS01 0JD 6.3.2.1 GO:0000287 ... P9WIL5 23872845 MOAD: Kd=0.7mM
    PDBbind: -logKd/Ki=3.05, Kd=0.9mM
    13158 4g5y:A (1.8) BS02 0OC 6.3.2.1 GO:0000287 ... P9WIL5 23872845 MOAD: Kd=1.69mM
    PDBbind: -logKd/Ki=2.77, Kd=1.7mM
    13159 4g8l:A (2.8) BS01 25A 3.1.26.- N/A Q05823 23084743 PDBbind: -logKd/Ki=8.00, Kd=10nM
    BindingDB: IC50=20nM, EC50=0.210000nM
    13160 4g8l:A (2.8) BS02 25A 3.1.26.- N/A Q05823 23084743 PDBbind: -logKd/Ki=8.00, Kd=10nM
    BindingDB: IC50=20nM, EC50=0.210000nM
    13161 4g8m:A (2.05) BS01 G8M ? GO:0015276 ... P19491 22789682 MOAD: Kd=12.8nM
    PDBbind: -logKd/Ki=7.89, Kd=12.8nM
    13162 4g8n:A (2.3) BS01 G8M ? GO:0015276 ... P42264 22789682 MOAD: Kd=63nM
    PDBbind: -logKd/Ki=7.20, Kd=63nM
    13163 4g8o:D (2.71) BS01 96P ? GO:0001525 ... P05121 24297881 PDBbind: -logKd/Ki=7.66, Kd=22nM
    13164 4g8r:B (2.19) BS01 96P ? GO:0001525 ... P05121 24297881 MOAD: Kd=22nM
    PDBbind: -logKd/Ki=7.66, Kd=22nM
    13165 4g8r:B (2.19) BS02 96P ? GO:0001525 ... P05121 24297881 MOAD: Kd=22nM
    PDBbind: -logKd/Ki=7.66, Kd=22nM
    13166 4g8v:A (1.7) BS01 0EY 4.6.1.18 GO:0003676 ... P61823 23122937 MOAD: Ki=1.6uM
    PDBbind: -logKd/Ki=5.80, Ki=1.6uM
    13167 4g8y:A (1.8) BS01 0FT 4.6.1.18 GO:0003676 ... P61823 23122937 MOAD: Ki=25.8uM
    PDBbind: -logKd/Ki=4.59, Ki=25.8uM
    13168 4g90:A (1.9) BS01 0G0 4.6.1.18 GO:0003676 ... P61823 23122937 MOAD: Ki=30.8uM
    PDBbind: -logKd/Ki=4.51, Ki=30.8uM
    13169 4g92:A (1.8) BS01 dna ? GO:0003700 ... P87249 22902862 PDBbind: Kd=3.3nM
    13170 4g92:A (1.8) BS02 dna ? GO:0003700 ... P87249 22902862 PDBbind: Kd=3.3nM
    13171 4g92:B (1.8) BS01 dna ? GO:0001228 ... Q5B5Z6 22902862 PDBbind: Kd=3.3nM
    13172 4g92:B (1.8) BS02 dna ? GO:0001228 ... Q5B5Z6 22902862 PDBbind: Kd=3.3nM
    13173 4g92:C (1.8) BS01 dna ? GO:0003677 ... C8V0B5 22902862 PDBbind: Kd=3.3nM
    13174 4g92:C (1.8) BS02 dna ? GO:0003677 ... C8V0B5 22902862 PDBbind: Kd=3.3nM
    13175 4g93:B (4.2) BS01 0YP ? GO:0005198 ... P03147 23871485 PDBbind: -logKd/Ki=3.52, Kd=300uM
    13176 4g93:C (4.2) BS01 0YP ? GO:0005198 ... P03147 23871485 PDBbind: -logKd/Ki=3.52, Kd=300uM
    13177 4g93:C (4.2) BS02 0YP ? GO:0005198 ... P03147 23871485 PDBbind: -logKd/Ki=3.52, Kd=300uM
    13178 4g95:A (1.35) BS01 OAG 1.5.1.3 GO:0000900 ... P00374 23545530 MOAD: Ki=24.4nM
    PDBbind: -logKd/Ki=7.61, Ki=24.4nM
    BindingDB: Ki=24nM
    13179 4g9c:A (3.5) BS01 0WP 2.7.11.1 GO:0004672 ... P15056 22954737 PDBbind: -logKd/Ki=8.64, IC50=2.3nM
    13180 4ga3:A (2.39) BS01 4GA 2.5.1.1
    2.5.1.10    		 GO:0004659 ... P14324 23610597 PDBbind: -logKd/Ki=7.52, IC50~30nM
    13181 4gah:A (2.3) BS01 0ET 3.1.2.2 N/A Q5T1C6 22871024 MOAD: Ki=0.8uM
    PDBbind: -logKd/Ki=6.10, Kd=0.8uM
    13182 4gah:A (2.3) BS02 0ET 3.1.2.2 N/A Q5T1C6 22871024 MOAD: Ki=0.8uM
    PDBbind: -logKd/Ki=6.10, Kd=0.8uM
    13183 4gah:B (2.3) BS01 0ET 3.1.2.2 N/A Q5T1C6 22871024 MOAD: Ki=0.8uM
    PDBbind: -logKd/Ki=6.10, Kd=0.8uM
    13184 4gah:B (2.3) BS02 0ET 3.1.2.2 N/A Q5T1C6 22871024 MOAD: Ki=0.8uM
    PDBbind: -logKd/Ki=6.10, Kd=0.8uM
    13185 4gah:B (2.3) BS03 0ET 3.1.2.2 N/A Q5T1C6 22871024 MOAD: Ki=0.8uM
    PDBbind: -logKd/Ki=6.10, Kd=0.8uM
    13186 4gb9:A (2.438) BS01 0WR 2.7.11.1
    2.7.1.137
    2.7.1.153
    2.7.1.154    		 GO:0016301 ... P48736 22877085 PDBbind: -logKd/Ki=6.27, IC50=540nM
    BindingDB: IC50=540nM
    13187 4gbd:A (1.975) BS01 MCF ? GO:0004000 ... Q9HZ64 23050701 MOAD: Ki=0.0048nM
    PDBbind: -logKd/Ki=11.32, Ki=0.0048nM
    13188 4gcj:A (1.42) BS01 X64 2.7.11.22 GO:0000082 ... P24941 23600925 PDBbind: -logKd/Ki=7.70, IC50=0.02uM
    BindingDB: IC50=1.1nM
    13189 4gck:A (2.05) BS01 dna ? GO:0000976 ... B5XTG2 23754405 PDBbind: Kd=162.4nM
    13190 4gck:A (2.05) BS02 dna ? GO:0000976 ... B5XTG2 23754405 PDBbind: Kd=162.4nM
    13191 4gck:B (2.05) BS01 dna ? GO:0000976 ... B5XTG2 23754405 PDBbind: Kd=162.4nM
    13192 4gck:C (2.05) BS01 dna ? GO:0000976 ... B5XTG2 23754405 PDBbind: Kd=162.4nM
    13193 4gck:C (2.05) BS02 dna ? GO:0000976 ... B5XTG2 23754405 PDBbind: Kd=162.4nM
    13194 4gck:D (2.05) BS01 dna ? GO:0000976 ... B5XTG2 23754405 PDBbind: Kd=162.4nM
    13195 4gcl:A (2.65) BS01 dna ? GO:0000976 ... Q1R4V1 23754405 PDBbind: Kd=156.5nM
    13196 4gcl:A (2.65) BS02 dna ? GO:0000976 ... Q1R4V1 23754405 PDBbind: Kd=156.5nM
    13197 4gcl:B (2.65) BS01 dna ? GO:0000976 ... Q1R4V1 23754405 PDBbind: Kd=156.5nM
    13198 4gcl:C (2.65) BS01 dna ? GO:0000976 ... Q1R4V1 23754405 PDBbind: Kd=156.5nM
    13199 4gcl:C (2.65) BS02 dna ? GO:0000976 ... Q1R4V1 23754405 PDBbind: Kd=156.5nM
    13200 4gcl:D (2.65) BS01 dna ? GO:0000976 ... Q1R4V1 23754405 PDBbind: Kd=156.5nM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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