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●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

BioLiP
Download all results in tab-seperated text for 24809 receptor-ligand interactions, whose format is explained at readme.txt.
  • Hover over PDB to view the title of the structure. Click PDB to view the structure at the RCSB PDB database. Resolution -1.00 means the resolution is unavailable, e.g., for NMR structures.
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  • Hover over Ligand to view the full ligand name. Click Ligand to view the 2D diagram and other detail information of the ligand.
  • Hover over EC number to view the full name of enzymatic activity.
  • Hover over GO terms to view all GO terms.
  • Hover over UniProt to view the protein name.

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    # PDB
    (Resolution Å)     		Site # Ligand EC number GO terms UniProt PubMed Binding
    affinity
    12401 4cn3:D (2.35) BS02 dna ? GO:0003700 ... P19793 25645674 PDBbind: Kd=44nM
    12402 4cn5:A (2.0) BS01 dna ? GO:0003700 ... P19793 25645674 PDBbind: Kd=40nM
    12403 4cn5:A (2.0) BS02 dna ? GO:0003700 ... P19793 25645674 PDBbind: Kd=40nM
    12404 4cn5:B (2.0) BS01 dna ? GO:0003700 ... P19793 25645674 PDBbind: Kd=40nM
    12405 4cn5:B (2.0) BS02 dna ? GO:0003700 ... P19793 25645674 PDBbind: Kd=40nM
    12406 4cn7:A (2.34) BS01 dna ? GO:0003700 ... P19793 25645674 PDBbind: Kd=155nM
    12407 4cn7:A (2.34) BS02 dna ? GO:0003700 ... P19793 25645674 PDBbind: Kd=155nM
    12408 4cn7:B (2.34) BS01 dna ? GO:0003700 ... P19793 25645674 PDBbind: Kd=155nM
    12409 4cn7:B (2.34) BS02 dna ? GO:0003700 ... P19793 25645674 PDBbind: Kd=155nM
    12410 4cn7:B (2.34) BS03 dna ? GO:0003700 ... P19793 25645674 PDBbind: Kd=155nM
    12411 4cn7:E (2.34) BS01 dna ? GO:0003700 ... P19793 25645674 PDBbind: Kd=155nM
    12412 4cn7:E (2.34) BS02 dna ? GO:0003700 ... P19793 25645674 PDBbind: Kd=155nM
    12413 4cn7:F (2.34) BS01 dna ? GO:0003700 ... P19793 25645674 PDBbind: Kd=155nM
    12414 4cn7:F (2.34) BS02 dna ? GO:0003700 ... P19793 25645674 PDBbind: Kd=155nM
    12415 4cnh:A (1.9) BS01 3U9 2.7.10.1 GO:0004672 ... Q9UM73 24819116 MOAD: Ki=4nM
    PDBbind: -logKd/Ki=8.40, Ki=4.0nM
    BindingDB: IC50=95nM, Ki=4.0nM
    12416 4cp5:D (2.32) BS01 EOI 2.7.4.6 GO:0004550 ... P22887 25766862 MOAD: Kd=452uM
    PDBbind: -logKd/Ki=3.34, Kd=452uM
    12417 4cp5:F (2.32) BS01 EOI 2.7.4.6 GO:0004550 ... P22887 25766862 MOAD: Kd=452uM
    PDBbind: -logKd/Ki=3.34, Kd=452uM
    12418 4cp7:A (1.8) BS01 9MW 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 25054811 MOAD: Ki=7.8nM
    PDBbind: -logKd/Ki=8.11, Ki=7.8nM
    12419 4cp7:B (1.8) BS01 9MW 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 25054811 PDBbind: -logKd/Ki=8.11, Ki=7.8nM
    12420 4cpq:A (2.35) BS01 9MW 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 25054811 PDBbind: -logKd/Ki=7.74, Ki=18nM
    12421 4cpq:B (2.35) BS01 9MW 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 25054811 PDBbind: -logKd/Ki=7.74, Ki=18nM
    12422 4cpr:A (1.8) BS01 378 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 25054811 MOAD: Ki=35nM
    PDBbind: -logKd/Ki=7.46, Ki=35nM
    12423 4cpr:B (1.8) BS01 378 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 25054811 PDBbind: -logKd/Ki=7.46, Ki=35nM
    12424 4cps:A (1.55) BS01 1T8 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 25054811 PDBbind: -logKd/Ki=8.27, Ki=5.4nM
    12425 4cps:B (1.55) BS01 1T8 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 25054811 PDBbind: -logKd/Ki=8.27, Ki=5.4nM
    12426 4cpt:A (1.7) BS01 1T8 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 25054811 PDBbind: -logKd/Ki=7.70, Ki=20nM
    12427 4cpt:B (1.7) BS01 1T8 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 25054811 MOAD: Ki=20nM
    PDBbind: -logKd/Ki=7.70, Ki=20nM
    12428 4cpu:A (1.82) BS01 V78 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 25054811 PDBbind: -logKd/Ki=7.53, Ki=29.5nM
    12429 4cpu:B (1.82) BS01 V78 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 25054811 MOAD: Ki=29.5nM
    PDBbind: -logKd/Ki=7.53, Ki=29.5nM
    12430 4cpw:A (1.7) BS01 V78 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 25054811 PDBbind: -logKd/Ki=7.50, Ki=31.5nM
    12431 4cpw:B (1.7) BS01 V78 2.7.7.-
    2.7.7.49
    2.7.7.7
    3.1.-.-
    3.1.13.2
    3.1.26.13
    3.4.23.16    		 GO:0004190 ... P03366 25054811 PDBbind: -logKd/Ki=7.50, Ki=31.5nM
    12432 4cpy:A (1.8) BS02 G39 3.2.1.18 GO:0004308 ... U5XBU0 24795482 MOAD: Ki=491.35nM
    PDBbind: -logKd/Ki=6.31, Ki=491.35nM
    12433 4cpz:A (2.2) BS02 ZMR 3.2.1.18 GO:0004308 ... U5XBU0 24795482 MOAD: Ki=20.85nM
    PDBbind: -logKd/Ki=7.68, Ki=20.85nM
    12434 4cq0:A (1.45) BS02 SXS 4.2.1.1
    4.2.1.69    		 GO:0002009 ... P00918 24689792 PDBbind: -logKd/Ki=5.09, Ki=8106nM
    BindingDB: Ki=>50000nM, IC50=49000nM
    12435 4cqe:A (2.3) BS01 CQE 2.7.11.1 GO:0004672 ... P15056 25430902 MOAD: Kd<3nM
    PDBbind: -logKd/Ki=8.43, IC50=3.7nM
    12436 4cqf:A (2.3) BS02 9Z8 3.5.1.98 GO:0000122 ... A5H660 24657767 PDBbind: -logKd/Ki=4.30, IC50=50uM
    BindingDB: IC50=50119nM
    12437 4cqg:A (2.57) BS01 OT5 2.7.10.2
    2.7.11.1    		 GO:0004672 ... Q61846 24657156 PDBbind: -logKd/Ki=9.39, IC50=0.41nM
    12438 4cr5:A (2.0) BS01 0TU 3.4.21.27 GO:0004252 ... P03951 25629509 MOAD: Ki=70uM
    PDBbind: -logKd/Ki=4.15, Ki=70uM
    BindingDB: Ki=70000nM, IC50=140000nM
    12439 4cr9:A (1.7) BS01 OTW 3.4.21.27 GO:0004252 ... P03951 25629509 MOAD: Ki=80uM
    PDBbind: -logKd/Ki=4.10, Ki=80uM
    12440 4cra:A (1.8) BS01 XJ8 3.4.21.27 GO:0004252 ... P03951 25629509 MOAD: Ki=0.06uM
    PDBbind: -logKd/Ki=7.22, Ki=0.06uM
    12441 4crb:A (1.85) BS01 7P0 3.4.21.27 GO:0004252 ... P03951 25629509 MOAD: Ki=0.027uM
    PDBbind: -logKd/Ki=7.57, Ki=0.027uM
    BindingDB: Ki=1.6nM
    12442 4crc:A (1.6) BS01 OTM 3.4.21.27 GO:0004252 ... P03951 25629509 MOAD: Ki=0.0019uM
    PDBbind: -logKd/Ki=8.72, Ki=0.0019uM
    BindingDB: Ki=1.4nM
    12443 4crd:A (2.1) BS01 OTJ 3.4.21.27 GO:0004252 ... P03951 25629509 MOAD: Ki=0.08uM
    PDBbind: -logKd/Ki=7.10, Ki=0.08uM
    12444 4crf:A (2.3) BS01 R9B 3.4.21.27 GO:0004252 ... P03951 25629509 MOAD: Ki=0.0005uM
    PDBbind: -logKd/Ki=9.30, Ki=0.5nM
    BindingDB: IC50=1.000000nM, Ki=0.500000nM
    12445 4crj:A (2.0) BS04 YH5 N/A GO:0003848 ... N/A 25357262 MOAD: Kd=1.1uM
    PDBbind: -logKd/Ki=5.96, Kd=1.1uM
    12446 4crl:A (2.4) BS01 C1I 2.7.11.22
    2.7.11.23    		 GO:0004672 ... P49336 26416749 MOAD: Kd=195pM
    PDBbind: -logKd/Ki=9.71, Kd=195pM
    BindingDB: Kd=17nM, IC50=12nM
    12447 4cs9:A (2.01) BS02 AMP ? GO:0000166 ... Q8QN58 24842877 PDBbind: -logKd/Ki=2.10, Kd=8mM
    12448 4cs9:C (2.01) BS02 AMP ? GO:0000166 ... Q8QN58 24842877 PDBbind: -logKd/Ki=2.10, Kd=8mM
    12449 4cs9:C (2.01) BS03 AMP ? GO:0000166 ... Q8QN58 24842877 PDBbind: -logKd/Ki=2.10, Kd=8mM
    12450 4csd:A (1.35) BS01 MFU ? N/A Q8XXK6 25044646 MOAD: Kd=1.23uM
    PDBbind: -logKd/Ki=5.91, Kd=1.23uM
    12451 4csd:A (1.35) BS02 MFU ? N/A Q8XXK6 25044646 MOAD: Kd=1.23uM
    PDBbind: -logKd/Ki=5.91, Kd=1.23uM
    12452 4csd:A (1.35) BS03 MFU ? N/A Q8XXK6 25044646 MOAD: Kd=1.23uM
    PDBbind: -logKd/Ki=5.91, Kd=1.23uM
    12453 4csd:A (1.35) BS04 MFU ? N/A Q8XXK6 25044646 MOAD: Kd=1.23uM
    PDBbind: -logKd/Ki=5.91, Kd=1.23uM
    12454 4csd:A (1.35) BS05 MFU ? N/A Q8XXK6 25044646 MOAD: Kd=1.23uM
    PDBbind: -logKd/Ki=5.91, Kd=1.23uM
    12455 4csd:A (1.35) BS06 MFU ? N/A Q8XXK6 25044646 MOAD: Kd=1.23uM
    PDBbind: -logKd/Ki=5.91, Kd=1.23uM
    12456 4csf:A (2.598) BS01 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12457 4csf:B (2.598) BS01 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12458 4csf:B (2.598) BS02 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12459 4csf:C (2.598) BS01 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12460 4csf:D (2.598) BS01 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12461 4csf:D (2.598) BS02 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12462 4csf:E (2.598) BS01 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12463 4csf:F (2.598) BS01 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12464 4csf:F (2.598) BS02 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12465 4csf:G (2.598) BS01 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12466 4csf:H (2.598) BS01 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12467 4csf:H (2.598) BS02 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12468 4csf:I (2.598) BS01 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12469 4csf:J (2.598) BS01 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12470 4csf:J (2.598) BS02 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12471 4csf:K (2.598) BS01 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12472 4csf:L (2.598) BS01 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12473 4csf:L (2.598) BS02 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12474 4csf:M (2.598) BS01 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12475 4csf:N (2.598) BS01 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12476 4csf:N (2.598) BS02 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12477 4csf:O (2.598) BS01 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12478 4csf:P (2.598) BS01 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12479 4csf:Q (2.598) BS01 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12480 4csf:R (2.598) BS01 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12481 4csf:R (2.598) BS02 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12482 4csf:S (2.598) BS01 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12483 4csf:T (2.598) BS01 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12484 4csf:T (2.598) BS02 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12485 4csf:U (2.598) BS01 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12486 4csf:V (2.598) BS01 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12487 4csf:V (2.598) BS02 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12488 4csf:W (2.598) BS01 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12489 4csf:X (2.598) BS01 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12490 4csf:X (2.598) BS02 rna ? GO:0003723 ... P21701 24688060 PDBbind: Kd=260nM
    12491 4csj:A (2.3) BS02 NN7 ? N/A P04150 24755427 MOAD: ic50=4.9nM
    PDBbind: -logKd/Ki=8.31, IC50=4.9nM
    BindingDB: IC50=1.5nM
    12492 4css:A (1.069) BS01 CWX ? GO:0007155 ... P08191 25666045 MOAD: Kd=3.5nM
    PDBbind: -logKd/Ki=8.46, Kd=3.5nM
    12493 4cst:A (1.1) BS01 CWK ? GO:0007155 ... P08191 25666045 MOAD: Kd=1.3nM
    PDBbind: -logKd/Ki=8.89, Kd=1.3nM
    12494 4ctj:A (1.47) BS02 3A9 3.4.21.91
    3.6.1.15
    3.6.4.13    		 GO:0004482 ... A9LIE0 24704437 PDBbind: -logKd/Ki=2.51, IC50=3.12mM
    12495 4ctk:A (1.53) BS02 SVN 3.4.21.91
    3.6.1.15
    3.6.4.13    		 GO:0004482 ... A9LIE0 24704437 PDBbind: -logKd/Ki=2.00, IC50>10mM
    12496 4cts:A (2.9) BS01 OAA 2.3.3.1 GO:0004108 ... P00889 6716477 PDBbind: -logKd/Ki=5.00, Kd<10uM
    12497 4cts:B (2.9) BS01 OAA 2.3.3.1 GO:0004108 ... P00889 6716477 PDBbind: -logKd/Ki=5.00, Kd<10uM
    12498 4cu1:A (1.89) BS03 71S 1.14.13.39 GO:0004517 ... P29473 24758147 MOAD: Ki=19417nM
    PDBbind: -logKd/Ki=4.71, Kd=19.4uM
    BindingDB: Ki=16000nM
    12499 4cu1:B (1.89) BS04 71S 1.14.13.39 GO:0004517 ... P29473 24758147 MOAD: Ki=19417nM
    PDBbind: -logKd/Ki=4.71, Kd=19.4uM
    BindingDB: Ki=16000nM
    12500 4cu7:A (2.2) BS01 GIF 3.2.1.23 GO:0004553 ... A0A0H2UP19 25210925 MOAD: Kd=26nM
    PDBbind: -logKd/Ki=7.59, Kd=26nM
    12501 4cu8:A (2.5) BS01 DGJ 3.2.1.23 GO:0004553 ... A0A0H2UP19 25210925 MOAD: Ki=33.9uM
    PDBbind: -logKd/Ki=4.47, Ki=33.9uM
    12502 4cwb:A (1.56) BS04 X6L N/A GO:0003848 ... N/A 25357262 MOAD: Kd=0.81uM
    PDBbind: -logKd/Ki=6.09, Kd=0.81uM
    12503 4cwf:A (2.0) BS01 H05 3.6.4.10 GO:0005524 ... P07900 24980703 MOAD: Ki=32.4uM
    PDBbind: -logKd/Ki=4.49, Ki=32.4uM
    12504 4cwn:A (1.8) BS01 6LV 3.6.4.10 GO:0005524 ... P07900 24980703 MOAD: Ki=2.6uM
    PDBbind: -logKd/Ki=5.59, Ki=2.6uM
    12505 4cwo:A (2.31) BS01 T62 3.6.4.10 GO:0005524 ... P07900 24980703 MOAD: Ki=6.1uM
    PDBbind: -logKd/Ki=5.21, Ki=6.1uM
    12506 4cwp:A (1.95) BS01 TV2 3.6.4.10 GO:0005524 ... P07900 24980703 MOAD: Ki=0.17uM
    PDBbind: -logKd/Ki=6.77, Ki=0.170uM
    12507 4cwq:A (2.0) BS01 W2D 3.6.4.10 GO:0005524 ... P07900 24980703 MOAD: Ki=0.088uM
    PDBbind: -logKd/Ki=7.06, Ki=0.088uM
    12508 4cwr:A (2.0) BS01 HAJ 3.6.4.10 GO:0005524 ... P07900 24980703 MOAD: Ki=0.005uM
    PDBbind: -logKd/Ki=8.30, Ki=0.005uM
    12509 4cws:A (2.3) BS01 G3R 3.6.4.10 GO:0005524 ... P07900 24980703 MOAD: Ki=0.012uM
    PDBbind: -logKd/Ki=7.92, Ki=0.012uM
    12510 4cwt:A (1.9) BS01 IK9 3.6.4.10 GO:0005524 ... P07900 24980703 MOAD: Ki=0.179uM
    PDBbind: -logKd/Ki=6.75, Ki=0.179uM
    12511 4cxw:A (3.1) BS01 6MK 1.14.11.-
    1.14.11.53    		 GO:0001659 ... Q9C0B1 28553460 PDBbind: -logKd/Ki=6.09, IC50=0.81uM
    12512 4cxx:A (2.76) BS01 640 1.14.11.-
    1.14.11.53    		 GO:0001659 ... Q9C0B1 28553460 PDBbind: -logKd/Ki=5.68, IC50=2.11uM
    12513 4cxy:A (2.65) BS01 DGR 1.14.11.-
    1.14.11.53    		 GO:0001659 ... Q9C0B1 28553460 PDBbind: -logKd/Ki=4.93, IC50=11.8uM
    12514 4czs:A (1.73) BS04 8LR ? GO:0005515 ... P81461 25860443 PDBbind: -logKd/Ki=5.00, Kd=10.0uM
    12515 4d08:A (1.9) BS02 Q2T 3.1.4.17 GO:0004114 ... O00408 25221665 MOAD: ic50=10nM
    PDBbind: -logKd/Ki=8.00, IC50=10nM
    BindingDB: IC50=10.0nM
    12516 4d09:A (2.5) BS01 788 3.1.4.17 GO:0004114 ... O00408 25221665 MOAD: ic50=1.7nM
    PDBbind: -logKd/Ki=8.77, IC50=1.7nM
    12517 4d0w:A (1.77) BS01 VVQ 2.7.10.2 GO:0004672 ... O60674 25009002 MOAD: ic50=0.02uM
    PDBbind: -logKd/Ki=7.70, IC50=0.02uM
    BindingDB: IC50=20nM
    12518 4d0x:A (1.82) BS01 953 2.7.10.2 GO:0004672 ... O60674 25009002 MOAD: ic50=0.008uM
    PDBbind: -logKd/Ki=8.10, IC50=0.008uM
    BindingDB: IC50=8.0nM
    12519 4d1a:A (3.4) BS01 I5H ? GO:0005886 ... D6R8X8 24952894 PDBbind: -logKd/Ki=4.72, Kd=19uM
    12520 4d1b:A (3.8) BS01 5FH ? GO:0005886 ... D6R8X8 24952894 PDBbind: -logKd/Ki=4.44, Kd=36uM
    12521 4d1c:A (3.7) BS01 B5H ? GO:0005886 ... D6R8X8 24952894 PDBbind: -logKd/Ki=5.70, Kd=2uM
    12522 4d1d:A (3.7) BS02 5ND ? GO:0005886 ... D6R8X8 24952894 PDBbind: -logKd/Ki=5.74, Kd=1.8uM
    12523 4d1j:A (1.8) BS01 DGJ 3.2.1.23 GO:0004565 ... B3PBE0 25171165 MOAD: Kd=485nM
    PDBbind: -logKd/Ki=6.31, Kd=485nM
    12524 4d1s:A (1.66) BS01 BJG 2.7.10.2 GO:0004672 ... O60674 25009002 MOAD: ic50=0.022uM
    PDBbind: -logKd/Ki=7.66, IC50=0.022uM
    BindingDB: IC50=22nM
    12525 4d1y:A (2.6) BS01 RBF ? GO:0000166 ... Q8A8A4 25263158 PDBbind: -logKd/Ki=7.13, Kd=74nM
    12526 4d2p:B (2.55) BS01 6Z7 2.7.10.2
    2.7.11.1    		 GO:0004672 ... Q14680 25589925 PDBbind: -logKd/Ki=5.68, IC50=2.1uM
    12527 4d2p:C (2.55) BS01 6Z7 2.7.10.2
    2.7.11.1    		 GO:0004672 ... Q14680 25589925 PDBbind: -logKd/Ki=5.68, IC50=2.1uM
    12528 4d2r:A (2.1) BS01 DYK 2.7.10.1 GO:0004672 ... P08069 25738750 MOAD: ic50=3.3uM
    PDBbind: -logKd/Ki=5.48, IC50=3.3uM
    BindingDB: IC50=3300nM
    12529 4d2s:A (2.5) BS01 DYK 2.7.12.1 GO:0004672 ... P33981 25738750 MOAD: ic50=0.02uM
    PDBbind: -logKd/Ki=7.70, IC50=0.02uM
    BindingDB: IC50=20nM
    12530 4d2t:A (2.7) BS01 3I7 2.7.10.2
    2.7.11.1    		 GO:0004672 ... Q14680 25589925 PDBbind: -logKd/Ki=6.00, IC50=1.0uM
    12531 4d2v:B (2.45) BS01 45R 2.7.10.2
    2.7.11.1    		 GO:0004672 ... Q14680 25589925 PDBbind: -logKd/Ki=7.43, IC50=0.037uM
    12532 4d2v:C (2.45) BS01 45R 2.7.10.2
    2.7.11.1    		 GO:0004672 ... Q14680 25589925 PDBbind: -logKd/Ki=7.43, IC50=0.037uM
    12533 4d2w:A (1.92) BS01 NF5 2.7.10.2
    2.7.11.1    		 GO:0004672 ... Q14680 25589925 PDBbind: -logKd/Ki=4.51, IC50=31uM
    BindingDB: IC50=31000nM
    12534 4d2w:D (1.92) BS01 NF5 2.7.10.2
    2.7.11.1    		 GO:0004672 ... Q14680 25589925 PDBbind: -logKd/Ki=4.51, IC50=31uM
    BindingDB: IC50=31000nM
    12535 4d2w:D (1.92) BS02 NF5 2.7.10.2
    2.7.11.1    		 GO:0004672 ... Q14680 25589925 PDBbind: -logKd/Ki=4.51, IC50=31uM
    BindingDB: IC50=31000nM
    12536 4d3h:A (2.0) BS01 2BA ? N/A Q2G229 25505271 MOAD: Kd=0.37uM
    PDBbind: -logKd/Ki=6.43, Kd=0.37uM
    12537 4d3h:A (2.0) BS02 2BA ? N/A Q2G229 25505271 MOAD: Kd=0.37uM
    PDBbind: -logKd/Ki=6.43, Kd=0.37uM
    12538 4d3h:B (2.0) BS01 2BA ? N/A Q2G229 25505271 MOAD: Kd=0.37uM
    PDBbind: -logKd/Ki=6.43, Kd=0.37uM
    12539 4d3h:B (2.0) BS02 2BA ? N/A Q2G229 25505271 MOAD: Kd=0.37uM
    PDBbind: -logKd/Ki=6.43, Kd=0.37uM
    12540 4d4d:A (1.4) BS01 IFM 3.2.1.101 GO:0005975 ... Q9Z4P9 25772148 PDBbind: -logKd/Ki=5.96, Kd=1.1uM
    12541 4d4d:A (1.4) BS02 MAN 3.2.1.101 GO:0005975 ... Q9Z4P9 25772148 PDBbind: -logKd/Ki=5.96, Kd=1.1uM
    12542 4d52:A (1.76) BS01 GXL ? GO:0008150 ... Q4WW81 25760594 PDBbind: -logKd/Ki=3.11, Kd=775uM
    12543 4d52:A (1.76) BS02 GIV ? GO:0008150 ... Q4WW81 25760594 PDBbind: -logKd/Ki=3.11, Kd=775uM
    12544 4d52:A (1.76) BS03 GXL ? GO:0008150 ... Q4WW81 25760594 PDBbind: -logKd/Ki=3.11, Kd=775uM
    12545 4d52:A (1.76) BS04 GXL ? GO:0008150 ... Q4WW81 25760594 PDBbind: -logKd/Ki=3.11, Kd=775uM
    12546 4d52:A (1.76) BS05 GXL ? GO:0008150 ... Q4WW81 25760594 PDBbind: -logKd/Ki=3.11, Kd=775uM
    12547 4d52:A (1.76) BS06 GIV ? GO:0008150 ... Q4WW81 25760594 PDBbind: -logKd/Ki=3.11, Kd=775uM
    12548 4d52:A (1.76) BS07 GIV ? GO:0008150 ... Q4WW81 25760594 PDBbind: -logKd/Ki=3.11, Kd=775uM
    12549 4d62:A (2.5) BS01 SIA N/A N/A N/A 26418008 MOAD: Kd=3.64mM
    PDBbind: -logKd/Ki=2.44, Kd=3.64mM
    12550 4d63:A (2.2) BS01 SIA N/A N/A N/A 26418008 MOAD: Kd~7mM
    PDBbind: -logKd/Ki=1.64, Kd~23mM
    12551 4d7b:A (1.15) BS01 TCW ? GO:0005179 ... P02766 26902880 MOAD: Kd=21nM
    PDBbind: -logKd/Ki=7.68, Kd=21nM
    BindingDB: Kd=56nM
    12552 4d7b:B (1.15) BS01 TCW ? GO:0005179 ... P02766 26902880 MOAD: Kd=21nM
    PDBbind: -logKd/Ki=7.68, Kd=21nM
    BindingDB: Kd=56nM
    12553 4d83:A (2.4) BS01 0GT 3.4.23.46 GO:0004190 ... P56817 22380629 MOAD: ic50=0.055uM
    PDBbind: -logKd/Ki=7.26, IC50=0.055uM
    12554 4d85:A (2.65) BS01 0GU 3.4.23.46 GO:0004190 ... P56817 22380629 PDBbind: -logKd/Ki=6.85, IC50=0.14uM
    12555 4d88:A (1.7) BS01 BXQ 3.4.23.46 GO:0004190 ... P56817 22380629 MOAD: ic50=0.049uM
    PDBbind: -logKd/Ki=7.31, IC50=0.049uM
    12556 4d89:A (1.65) BS01 BXD 3.4.23.46 GO:0004190 ... P56817 22380629 MOAD: ic50=0.002uM
    PDBbind: -logKd/Ki=8.70, IC50=0.002uM
    12557 4d8a:A (2.183) BS02 0HY 2.5.1.15 GO:0004156 ... Q81VW8 22416048 PDBbind: -logKd/Ki=3.42, IC50=376uM
    12558 4d8c:A (2.07) BS01 BXD 3.4.23.46 GO:0004190 ... P56817 22380629 MOAD: ic50=0.002uM
    PDBbind: -logKd/Ki=8.70, IC50=2nM
    12559 4d8e:A (1.497) BS01 E64 N/A GO:0006508 ... N/A 22645124 PDBbind: -logKd/Ki=7.01, IC50=98nM
    12560 4d8n:A (1.68) BS01 0HM 3.4.21.- GO:0001533 ... Q92876 22386244 MOAD: ic50=1.8uM
    PDBbind: -logKd/Ki=5.74, IC50=1.8uM
    12561 4d8s:A (2.398) BS02 0HX 3.2.1.18 GO:0004308 ... Q07599 23017008 MOAD: ic50=0.32uM
    PDBbind: -logKd/Ki=6.49, IC50=0.32uM
    12562 4d8z:A (2.198) BS01 0J2 2.5.1.15 GO:0004156 ... Q81VW8 22416048 MOAD: Kd=0.51uM
    PDBbind: -logKd/Ki=6.29, Kd=0.51uM
    12563 4d9p:A (2.26) BS01 Z17 2.5.1.15 GO:0004156 ... Q81VW8 22416048 MOAD: ic50=145uM
    PDBbind: -logKd/Ki=3.84, IC50=145uM
    12564 4da5:A (2.4) BS01 0H7 2.7.1.32
    2.7.1.82    		 GO:0004103 ... P35790 23416529 MOAD: Ki=0.36uM
    PDBbind: -logKd/Ki=6.44, Ki=0.36uM
    12565 4daf:A (2.501) BS01 0J4 2.5.1.15 GO:0004156 ... Q81VW8 22416048 MOAD: Kd=0.076uM
    PDBbind: -logKd/Ki=7.12, Kd=0.076uM
    12566 4dai:A (2.5) BS01 0J5 2.5.1.15 GO:0004156 ... Q81VW8 22416048 MOAD: Kd=110nM
    PDBbind: -logKd/Ki=6.96, Kd=110nM
    12567 4daw:A (2.0) BS01 0H2 2.7.11.1 GO:0004672 ... Q13153 22383326 PDBbind: -logKd/Ki=7.08, IC50=83nM
    12568 4db7:A (2.5) BS01 Z25 2.5.1.15 GO:0004156 ... Q81VW8 22416048 MOAD: Kd=0.273uM
    PDBbind: -logKd/Ki=6.56, Kd=0.273uM
    12569 4dbm:A (2.3) BS01 0J0 ? GO:0004888 ... Q8WSF8 22394239 MOAD: Kd=24nM
    PDBbind: -logKd/Ki=7.62, Kd=24nM
    12570 4dbm:A (2.3) BS02 0J0 ? GO:0004888 ... Q8WSF8 22394239 MOAD: Kd=24nM
    PDBbind: -logKd/Ki=7.62, Kd=24nM
    12571 4dbm:E (2.3) BS01 0J0 ? GO:0004888 ... Q8WSF8 22394239 MOAD: Kd=24nM
    PDBbind: -logKd/Ki=7.62, Kd=24nM
    12572 4dbm:E (2.3) BS02 0J0 ? GO:0004888 ... Q8WSF8 22394239 MOAD: Kd=24nM
    PDBbind: -logKd/Ki=7.62, Kd=24nM
    12573 4dbn:A (3.15) BS01 0JA 2.7.11.1 GO:0004672 ... P15056 22376051 PDBbind: -logKd/Ki=8.15, IC50=7.0nM
    12574 4dbn:B (3.15) BS01 0JA 2.7.11.1 GO:0004672 ... P15056 22376051 PDBbind: -logKd/Ki=8.15, IC50=7.0nM
    12575 4dcd:A (1.69) BS01 K36 2.7.7.48
    3.4.22.28
    3.4.22.29
    3.6.1.15    		 GO:0004197 ... P03300 22915796 PDBbind: -logKd/Ki=5.75, IC50=1.77uM
    12576 4dce:A (2.03) BS01 0JF 2.7.10.1 GO:0004672 ... Q9UM73 22263917 MOAD: ic50=0.174uM
    PDBbind: -logKd/Ki=6.76, IC50=0.174uM
    BindingDB: IC50=384nM
    12577 4dcs:A (2.25) BS01 GDP ? GO:0005525 ... P50743 23056455 MOAD: Kd=8uM
    PDBbind: -logKd/Ki=5.10, Kd=8.0uM
    12578 4dcx:A (2.0) BS01 L2D ? GO:0005515 ... P33590 22526565 PDBbind: -logKd/Ki=4.50, Kd=31.4uM
    12579 4dcy:A (2.0) BS01 L2M ? GO:0005515 ... P33590 22526565 PDBbind: -logKd/Ki=4.52, Kd=30.2uM
    12580 4ddh:A (2.07) BS01 MS0 6.3.2.1 GO:0000287 ... P9WIL5 23872845 MOAD: Kd=0.48mM
    PDBbind: -logKd/Ki=3.30, Kd=0.5mM
    12581 4ddk:A (1.75) BS01 0HN 6.3.2.1 GO:0000287 ... P9WIL5 23872845 MOAD: Kd=5.13mM
    PDBbind: -logKd/Ki=2.29, Kd=5.1mM
    12582 4ddl:A (2.07) BS02 0JQ 3.1.4.17 GO:0004114 ... Q9Y233 22365755 MOAD: ic50=4.9nM
    PDBbind: -logKd/Ki=8.31, IC50=4.9nM
    BindingDB: IC50=4.9nM
    12583 4ddm:A (1.83) BS01 0HO 6.3.2.1 GO:0000287 ... P9WIL5 23872845 MOAD: Kd=3.48mM
    PDBbind: -logKd/Ki=2.46, Kd=3.5mM
    12584 4dds:A (1.36) BS01 0J7 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=9.7uM
    PDBbind: -logKd/Ki=5.01, Ki=9.7uM
    12585 4dds:A (1.36) BS02 0J7 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=9.7uM
    PDBbind: -logKd/Ki=5.01, Ki=9.7uM
    12586 4dds:A (1.36) BS03 0J7 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=9.7uM
    PDBbind: -logKd/Ki=5.01, Ki=9.7uM
    12587 4ddy:A (1.36) BS01 DN6 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=2.4uM
    PDBbind: -logKd/Ki=5.62, Ki=2.4uM
    12588 4ddy:A (1.36) BS02 DN6 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=2.4uM
    PDBbind: -logKd/Ki=5.62, Ki=2.4uM
    12589 4ddy:A (1.36) BS03 DN6 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=2.4uM
    PDBbind: -logKd/Ki=5.62, Ki=2.4uM
    12590 4de0:A (1.12) BS01 0JB 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=1.3uM
    PDBbind: -logKd/Ki=5.89, Ki=1.3uM
    12591 4de1:A (1.26) BS01 0J6 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=1.1uM
    PDBbind: -logKd/Ki=5.96, Ki=1.1uM
    12592 4de2:A (1.4) BS01 DN3 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=76uM
    PDBbind: -logKd/Ki=4.12, Ki=76.0uM
    12593 4de2:A (1.4) BS02 DN3 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=76uM
    PDBbind: -logKd/Ki=4.12, Ki=76.0uM
    12594 4de3:A (1.44) BS01 DN8 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=3uM
    PDBbind: -logKd/Ki=5.52, Ki=3.0uM
    12595 4de3:A (1.44) BS02 DN8 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=3uM
    PDBbind: -logKd/Ki=5.52, Ki=3.0uM
    12596 4de3:A (1.44) BS03 DN8 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=3uM
    PDBbind: -logKd/Ki=5.52, Ki=3.0uM
    12597 4de3:A (1.44) BS04 DN8 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=3uM
    PDBbind: -logKd/Ki=5.52, Ki=3.0uM
    12598 4de3:A (1.44) BS05 DN8 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=3uM
    PDBbind: -logKd/Ki=5.52, Ki=3.0uM
    12599 4de3:A (1.44) BS06 DN8 3.5.2.6 GO:0008800 ... Q9L5C8 22296601 MOAD: Ki=3uM
    PDBbind: -logKd/Ki=5.52, Ki=3.0uM
    12600 4de5:A (2.25) BS01 0JD 6.3.2.1 GO:0000287 ... P9WIL5 23872845 MOAD: Kd=670uM
    PDBbind: -logKd/Ki=3.15, Kd=0.7mM
    Reference:
  • Chengxin Zhang, Xi Zhang, Peter L Freddolino, and Yang Zhang. BioLiP2: an updated structure database for biologically relevent ligand-protein interactions, Nucleic Acids Research, gkad630 (2023).
  • Jianyi Yang, Ambrish Roy, and Yang Zhang. BioLiP: a semi-manually curated database for biologically relevant ligand-protein interactions, Nucleic Acids Research, 41: D1096-D1103 (2013) (download the PDF file).

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